Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10026827m.g Citrus clementina HOM05D007707 ORTHO05D009711 1.6e-49 199.1 101 100.0
TWI73G0967 Tripterygium wilfordii HOM05D007707 ORTHO05D009711 2.9e-27 125.2 89 71.9
Thecc.01G013500 Theobroma cacao HOM05D007707 ORTHO05D009711 6.5e-27 124.0 87 73.6
Gohir.A11G173000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 2.5e-26 122.1 88 72.7
Gohir.D11G180000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 5.5e-26 120.9 88 71.6
Gorai.007G191900 Gossypium raimondii HOM05D007707 ORTHO05D009711 5.5e-26 120.9 88 71.6
Cfa007014 Carpinus fangiana HOM05D007707 ORTHO05D009711 9.4e-26 120.2 88 70.5
Haze_03717 Corylus avellana HOM05D007707 ORTHO05D009711 6.1e-25 117.5 88 68.2
CiPaw.07G061600 Carya illinoinensis HOM05D007707 ORTHO05D009711 7.9e-25 117.1 88 67.0
COL.COLO4_22472 Corchorus olitorius HOM05D007707 ORTHO05D009711 1.4e-24 116.3 88 70.5
BolC7t46567H Brassica oleracea HOM05D007707 ORTHO05D009711 1.8e-24 115.9 77 72.7
Prupe.7G172900 Prunus persica HOM05D007707 ORTHO05D009711 2.3e-24 115.5 89 70.8
THA.LOC104804277 Tarenaya hassleriana HOM05D007707 ORTHO05D009711 2.3e-24 115.5 79 75.9
A03p63940 Brassica napus HOM05D007707 ORTHO05D009711 3.9e-24 114.8 77 72.7
BraA03t15463Z Brassica rapa HOM05D007707 ORTHO05D009711 3.9e-24 114.8 77 72.7
MD15G1241100 Malus domestica HOM05D007707 ORTHO05D009711 3.9e-24 114.8 86 68.6
Aa31LG6G12850 Aethionema arabicum HOM05D007707 ORTHO05D009711 5.1e-24 114.4 68 80.9
Duzib147G0406 Durio zibethinus HOM05D007707 ORTHO05D009711 5.1e-24 114.4 86 73.3
CANSAT01G1439 Cannabis sativa HOM05D007707 ORTHO05D009711 6.7e-24 114.0 68 79.4
Thhalv10026722m.g Eutrema salsugineum HOM05D007707 ORTHO05D009711 6.7e-24 114.0 68 79.4
Sp7g33690 Schrenkiella parvula HOM05D007707 ORTHO05D009711 6.7e-24 114.0 77 72.7
Cc07_g11150 Coffea canephora HOM05D007707 ORTHO05D009711 8.8e-24 113.6 82 69.5
MELO3C007931.2 Cucumis melo HOM05D007707 ORTHO05D009711 8.8e-24 113.6 78 71.8
CARHR244300 Cardamine hirsuta HOM05D007707 ORTHO05D009711 1.1e-23 113.2 72 76.4
ClCG01G020510 Citrullus lanatus HOM05D007707 ORTHO05D009711 2.0e-23 112.5 72 75.0
AL7G15140 Arabidopsis lyrata HOM05D007707 ORTHO05D009711 2.5e-23 112.1 77 70.1
Manes.01G149600 Manihot esculenta HOM05D007707 ORTHO05D009711 2.5e-23 112.1 83 66.3
AT4G35905 Arabidopsis thaliana HOM05D007707 ORTHO05D009711 5.7e-23 110.9 77 70.1
Carub.0007s0432 Capsella rubella HOM05D007707 ORTHO05D009711 7.4e-23 110.5 68 77.9
CsaV3_6G047390 Cucumis sativus L. HOM05D007707 ORTHO05D009711 1.7e-22 109.4 78 69.2
Dinv08562 Davidia involucrata HOM05D007707 ORTHO05D009711 1.7e-22 109.4 80 71.2
QL06p051322 Quercus lobata HOM05D007707 ORTHO05D009711 2.2e-22 109.0 81 69.1
Ah.02g123290 Amaranthus hybridus HOM05D007707 ORTHO05D009711 6.3e-22 107.5 83 65.1
AUR62018017 Chenopodium quinoa HOM05D007707 ORTHO05D009711 1.8e-21 105.9 68 76.5
vmacro22198 Vaccinium macrocarpon HOM05D007707 ORTHO05D009711 1.8e-21 105.9 80 66.2
Migut.J01748 Erythranthe guttata HOM05D007707 ORTHO05D009711 2.4e-21 105.5 82 63.4
Rhsim10G0207600 Rhododendron simsii HOM05D007707 ORTHO05D009711 2.4e-21 105.5 72 66.7
Hma1.2p1_0869F.1_g230620 Hydrangea macrophylla HOM05D007707 ORTHO05D009711 4.1e-21 104.8 72 66.7
Nitab4.5_0001685g0100 Nicotiana tabacum HOM05D007707 ORTHO05D009711 5.3e-21 104.4 87 59.8
PGR102G1942 Punica granatum HOM05D007707 ORTHO05D009711 9.1e-21 103.6 73 72.6
Nn6g31960 Nelumbo nucifera HOM05D007707 ORTHO05D009711 1.5e-20 102.8 87 58.6
RcHm_v2.0_Chr2g0098761 Rosa chinensis HOM05D007707 ORTHO05D009711 2.0e-20 102.4 86 62.8
Sed0012149 Sechium edule HOM05D007707 ORTHO05D009711 2.0e-20 102.4 88 62.5
EL10Ac6g15163 Beta vulgaris HOM05D007707 ORTHO05D009711 3.4e-20 101.7 78 67.9
BcaNung05054 Brassica carinata HOM05D007707 ORTHO05D009711 4.5e-20 101.3 78 67.9
Glyma.11G079800 Glycine max HOM05D007707 ORTHO05D009711 5.9e-20 100.9 88 62.5
MBI08_g05062_MAGBIO Magnolia biondii HOM05D007707 ORTHO05D009711 5.9e-20 100.9 80 66.2
FAN19G0536 Fragaria x ananassa HOM05D007707 ORTHO05D009711 7.7e-20 100.5 86 61.6
Nitab4.5_0001561g0120 Nicotiana tabacum HOM05D007707 ORTHO05D009711 1.3e-19 99.8 72 65.3
Sabra15G0015600 Salix brachista HOM05D007707 ORTHO05D009711 1.3e-19 99.8 62 77.4
Oeu056393.1 Olea europaea HOM05D007707 ORTHO05D009711 1.7e-19 99.4 86 55.8
SGA_v2.0_scaffold36G14291 Striga asiatica HOM05D007707 ORTHO05D009711 2.2e-19 99.0 89 57.3
FAN28G2511 Fragaria x ananassa HOM05D007707 ORTHO05D009711 2.9e-19 98.6 68 70.6
FAN23G0755 Fragaria x ananassa HOM05D007707 ORTHO05D009711 3.8e-19 98.2 67 71.6
Glyma.01G163700 Glycine max HOM05D007707 ORTHO05D009711 5.0e-19 97.8 88 59.1
DCAR_011610 Daucus carota HOM05D007707 ORTHO05D009711 1.1e-18 96.7 87 56.3
Phvul.002G105900 Phaseolus vulgaris HOM05D007707 ORTHO05D009711 1.4e-18 96.3 72 68.1
Psat2g152640 Pisum sativum HOM05D007707 ORTHO05D009711 1.9e-18 95.9 82 59.8
CAN.G354.55 Capsicum annuum HOM05D007707 ORTHO05D009711 2.5e-18 95.5 80 61.2
Solyc03g033370.3 Solanum lycopersicum HOM05D007707 ORTHO05D009711 2.5e-18 95.5 72 65.3
Actinidia22948 Actinidia chinensis HOM05D007707 ORTHO05D009711 5.5e-18 94.4 56 78.6
Lalb_Chr09g0321541 Lupinus albus HOM05D007707 ORTHO05D009711 9.4e-18 93.6 82 56.1
TPR.G10525 Trifolium pratense HOM05D007707 ORTHO05D009711 9.4e-18 93.6 87 56.3
Peaxi162Scf00635g00914 Petunia axillaris HOM05D007707 ORTHO05D009711 1.2e-17 93.2 79 60.8
Sopen03g006140 Solanum pennellii HOM05D007707 ORTHO05D009711 1.2e-17 93.2 72 63.9
Medtr5g022760 Medicago truncatula HOM05D007707 ORTHO05D009711 1.6e-17 92.8 72 63.9
ECA246G5216 Erigeron canadensis HOM05D007707 ORTHO05D009711 2.1e-17 92.4 57 73.7
Lj2g0020635 Lotus japonicus HOM05D007707 ORTHO05D009711 2.7e-17 92.0 78 60.3
Sc16g0001900 Simmondsia chinensis HOM05D007707 ORTHO05D009711 2.7e-17 92.0 87 56.3
arahy.Tifrunner.gnm1.ann1.LEB2TA Arachis hypogaea HOM05D007707 ORTHO05D009711 4.7e-17 91.3 72 63.9
arahy.Tifrunner.gnm1.ann1.URRP40 Arachis hypogaea HOM05D007707 ORTHO05D009711 4.7e-17 91.3 72 63.9
Lsat_1_v5_gn_3_71080 Lactuca sativa HOM05D007707 ORTHO05D009711 1.0e-16 90.1 58 74.1
Hund14067 Selenicereus undatus HOM05D007707 ORTHO05D009711 8.8e-16 87.0 61 63.9
Zm00001eb222710 Zea mays HOM05D007707 ORTHO05D009711 1.1e-15 86.7 78 53.8
ATR0180G024 Amborella trichopoda HOM05D007707 ORTHO05D009711 2.0e-15 85.9 80 52.5
CDE05G2854 Ceratophyllum demersum HOM05D007707 ORTHO05D009711 4.4e-15 84.7 79 59.5
Os10g0438700 Oryza sativa ssp. japonica HOM05D007707 ORTHO05D009711 5.7e-15 84.3 91 49.5
GSVIVG01006523001 Vitis vinifera HOM05D007707 ORTHO05D009711 7.4e-15 84.0 53 71.7
Eucgr.J02480 Eucalyptus grandis HOM05D007707 ORTHO05D009711 8.2e-14 80.5 59 71.2
FvH4_1g11290 Fragaria vesca HOM05D007707 ORTHO05D009711 3.5e-12 75.1 60 60.0
arahy.Tifrunner.gnm1.ann1.04LXIS Arachis hypogaea HOM05D000001 ORTHO05D009700 5.9e-12 74.3 57 64.9
Pp3c14_18830 Physcomitrium patens HOM05D007707 ORTHO05D009711 1.7e-11 72.8 70 48.6
PGSC0003DMG400022552 Solanum tuberosum HOM05D007707 ORTHO05D009711 1.5e-10 69.7 52 65.4
SEGI_22054 Sequoiadendron giganteum HOM05D007707 ORTHO05D009711 4.2e-10 68.2 57 54.4
C07p61410 Brassica napus HOM05D007707 ORTHO05D009711 2.7e-09 65.5 43 72.1
Mapoly0124s0029 Marchantia polymorpha HOM05D007707 ORTHO05D009711 6.1e-09 64.3 47 59.6
HanXRQChr09g0245181 Helianthus annuus HOM05D007707 ORTHO05D009711 8.0e-09 63.9 37 78.4
SalBow2G3201 Salvia bowleyana HOM05D007707 ORTHO05D009711 3.0e-08 62.0 45 64.4
HPP92_020736 Vanilla planifolia HOM05D007707 ORTHO05D009711 3.0e-08 62.0 52 63.5
Oeu060284.1 Olea europaea HOM05D007707 ORTHO05D009711 1.1e-07 60.1 72 52.8
CSS0044701 Camellia sinensis var. sinensis HOM05D007707 ORTHO05D009711 2.6e-07 58.9 38 65.8
Dinv40127 Davidia involucrata HOM05D007707 ORTHO05D009711 2.2e-06 55.8 52 53.8


User provided reference genes

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