Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10024113m.g Citrus clementina HOM05D001140 ORTHO05D000470 4.0e-33 144.1 66 100.0
Ciclev10009810m.g Citrus clementina HOM05D001140 ORTHO05D000470 8.0e-18 93.2 76 63.2
Ciclev10003690m.g Citrus clementina HOM05D001140 ORTHO05D000470 1.2e-13 79.3 76 53.9
Ciclev10003089m.g Citrus clementina HOM05D001140 ORTHO05D000470 2.3e-12 75.1 61 57.4
Rhsim06G0234100 Rhododendron simsii HOM05D001140 ORTHO05D000470 2.8e-10 68.2 81 46.9
PGR083G2712 Punica granatum HOM05D001140 ORTHO05D000470 3.6e-10 67.8 74 48.6
CSS0032921 Camellia sinensis var. sinensis HOM05D001140 ORTHO05D000470 8.0e-10 66.6 81 48.1
Ciclev10010382m.g Citrus clementina HOM05D001140 ORTHO05D000470 8.0e-10 66.6 70 52.9
Sc20g0000090 Simmondsia chinensis HOM05D001140 ORTHO05D000470 1.4e-09 65.9 88 45.5
vmacro11630 Vaccinium macrocarpon HOM05D001140 ORTHO05D000470 2.3e-09 65.1 85 47.1
Dinv10377 Davidia involucrata HOM05D001140 ORTHO05D000470 3.1e-09 64.7 76 50.0
Lj8P181T54 Lonicera japonica HOM05D001140 ORTHO05D000470 4.0e-09 64.3 60 56.7
RcHm_v2.0_Chr5g0075161 Rosa chinensis HOM05D001140 ORTHO05D000470 5.2e-09 63.9 80 47.5
SGA_v2.0_scaffold186G40241 Striga asiatica HOM05D001140 ORTHO05D000470 6.8e-09 63.5 52 65.4
Cfa016944 Carpinus fangiana HOM05D001140 ORTHO05D000470 8.9e-09 63.2 77 45.5
Haze_09898 Corylus avellana HOM05D001140 ORTHO05D000470 8.9e-09 63.2 77 45.5
Sc03g0011710 Simmondsia chinensis HOM05D001140 ORTHO05D000470 8.9e-09 63.2 91 44.0
Actinidia10584 Actinidia chinensis HOM05D001140 ORTHO05D000470 1.2e-08 62.8 82 45.1
CiPaw.11G209000 Carya illinoinensis HOM05D001140 ORTHO05D000470 1.2e-08 62.8 79 48.1
SGA_v2.0_scaffold42G15937 Striga asiatica HOM05D001140 ORTHO05D000470 1.2e-08 62.8 77 49.4
COL.COLO4_07764 Corchorus olitorius HOM05D001140 ORTHO05D000470 1.5e-08 62.4 70 52.9
Gohir.A13G130114 Gossypium hirsutum HOM05D001140 ORTHO05D000470 1.5e-08 62.4 70 48.6
Prupe.6G032200 Prunus persica HOM05D001140 ORTHO05D000470 1.5e-08 62.4 81 48.1
Peaxi162Scf00232g00041 Petunia axillaris HOM05D001140 ORTHO05D000470 2.0e-08 62.0 85 45.9
SalBow8G2210 Salvia bowleyana HOM05D001140 ORTHO05D000470 2.0e-08 62.0 73 52.1
SalBow8G5495 Salvia bowleyana HOM05D001140 ORTHO05D000470 2.0e-08 62.0 73 52.1
Cfa000006 Carpinus fangiana HOM05D001140 ORTHO05D000470 2.6e-08 61.6 79 46.8
Duzib170G0285 Durio zibethinus HOM05D001140 ORTHO05D000470 2.6e-08 61.6 71 50.7
Peaxi162Scf00232g00045 Petunia axillaris HOM05D001140 ORTHO05D000470 2.6e-08 61.6 85 45.9
Hma1.2p1_0321F.1_g124170 Hydrangea macrophylla HOM05D001140 ORTHO05D000470 3.4e-08 61.2 78 50.0
Actinidia30364 Actinidia chinensis HOM05D001140 ORTHO05D000470 4.4e-08 60.8 83 43.4
DCAR_017599 Daucus carota HOM05D001140 ORTHO05D000470 4.4e-08 60.8 78 46.2
Gohir.D05G386900 Gossypium hirsutum HOM05D001140 ORTHO05D000470 4.4e-08 60.8 70 51.4
Thecc.07G005000 Theobroma cacao HOM05D001140 ORTHO05D000470 5.8e-08 60.5 70 50.0
Duzib268G0448 Durio zibethinus HOM05D001140 ORTHO05D000470 7.5e-08 60.1 71 47.9
Gohir.A04G002500 Gossypium hirsutum HOM05D001140 ORTHO05D000470 7.5e-08 60.1 70 51.4
Gohir.D13G133066 Gossypium hirsutum HOM05D001140 ORTHO05D000470 7.5e-08 60.1 70 48.6
Gorai.013G149300 Gossypium raimondii HOM05D001140 ORTHO05D000470 7.5e-08 60.1 70 48.6
MD03G1040000 Malus domestica HOM05D001140 ORTHO05D000470 7.5e-08 60.1 80 45.0
Peaxi162Scf00232g00419 Petunia axillaris HOM05D001140 ORTHO05D000470 7.5e-08 60.1 70 47.1
TAR629G0407 Trochodendron aralioides HOM05D001140 ORTHO05D000470 7.5e-08 60.1 75 45.3
GSVIVG01014782001 Vitis vinifera HOM05D001140 ORTHO05D000470 7.5e-08 60.1 82 42.7
ECA236G0768 Erigeron canadensis HOM05D001140 ORTHO05D000470 9.8e-08 59.7 71 47.9
FvH4_3g41970 Fragaria vesca HOM05D001140 ORTHO05D000470 9.8e-08 59.7 82 45.1
Glyma.14G010600 Glycine max HOM05D001140 ORTHO05D000470 9.8e-08 59.7 85 45.9
Haze_07053 Corylus avellana HOM05D001140 ORTHO05D000470 1.3e-07 59.3 79 45.6
HanXRQChr05g0160191 Helianthus annuus HOM05D001140 ORTHO05D000470 1.3e-07 59.3 79 50.6
Lsat_1_v5_gn_7_116420 Lactuca sativa HOM05D001140 ORTHO05D000470 1.3e-07 59.3 79 48.1
CAN.G623.53 Capsicum annuum HOM05D001140 ORTHO05D000470 1.7e-07 58.9 59 52.5
Duzib213G0098 Durio zibethinus HOM05D001140 ORTHO05D000470 1.7e-07 58.9 70 48.6
Solyc07g065970.1 Solanum lycopersicum HOM05D001140 ORTHO05D000470 1.7e-07 58.9 85 41.2
PGSC0003DMG400022152 Solanum tuberosum HOM05D001140 ORTHO05D000470 1.7e-07 58.9 80 45.0
TAR626G1134 Trochodendron aralioides HOM05D001140 ORTHO05D000470 1.7e-07 58.9 75 45.3
FAN11G0381 Fragaria x ananassa HOM05D001140 ORTHO05D000470 2.2e-07 58.5 82 43.9
HanXRQChr11g0334571 Helianthus annuus HOM05D001140 ORTHO05D000470 2.2e-07 58.5 82 48.8
MBI15_g41025_MAGBIO Magnolia biondii HOM05D001140 ORTHO05D000470 2.2e-07 58.5 71 46.5
MD11G1041400 Malus domestica HOM05D001140 ORTHO05D000470 2.2e-07 58.5 81 46.9
Potri.001G469600 Populus trichocarpa HOM05D001140 ORTHO05D000470 2.2e-07 58.5 83 47.0
HPP92_007495 Vanilla planifolia HOM05D001140 ORTHO05D000470 2.2e-07 58.5 71 45.1
ECA236G3927 Erigeron canadensis HOM05D001140 ORTHO05D000470 2.9e-07 58.2 70 48.6
MBI15_g35677_MAGBIO Magnolia biondii HOM05D001140 ORTHO05D000470 2.9e-07 58.2 71 46.5
TWI39G0688 Tripterygium wilfordii HOM05D001140 ORTHO05D000470 2.9e-07 58.2 78 44.9
VMungo0647G0495 Vigna mungo HOM05D001140 ORTHO05D000470 2.9e-07 58.2 85 41.2
MBI15_g12282_MAGBIO Magnolia biondii HOM05D001140 ORTHO05D000470 3.7e-07 57.8 71 46.5
Sopen07g034170 Solanum pennellii HOM05D001140 ORTHO05D000470 3.7e-07 57.8 85 42.4
PGSC0003DMG400022151 Solanum tuberosum HOM05D001140 ORTHO05D000470 3.7e-07 57.8 85 40.0
FAN21G1319 Fragaria x ananassa HOM05D001140 ORTHO05D000470 4.9e-07 57.4 83 44.6
Potri.006G001301 Populus trichocarpa HOM05D001140 ORTHO05D000470 4.9e-07 57.4 79 43.0
TPR.G17937 Trifolium pratense HOM05D001140 ORTHO05D000470 4.9e-07 57.4 87 43.7
BcaC09g48298 Brassica carinata HOM05D001140 ORTHO05D000470 6.4e-07 57.0 76 44.7
A01p40270 Brassica napus HOM05D001140 ORTHO05D000470 6.4e-07 57.0 76 44.7
C01p51780 Brassica napus HOM05D001140 ORTHO05D000470 6.4e-07 57.0 76 44.7
BolC1t05124H Brassica oleracea HOM05D001140 ORTHO05D000470 6.4e-07 57.0 76 44.7
BraA01t04063Z Brassica rapa HOM05D001140 ORTHO05D000470 6.4e-07 57.0 76 44.7
Carub.0003s1269 Capsella rubella HOM05D001140 ORTHO05D000470 6.4e-07 57.0 76 44.7
Cpa.g.sc5.233 Carica papaya HOM05D001140 ORTHO05D000470 6.4e-07 57.0 70 48.6
Lj6g0024111 Lotus japonicus HOM05D001140 ORTHO05D000470 6.4e-07 57.0 85 40.0
Lalb_Chr17g0349041 Lupinus albus HOM05D001140 ORTHO05D000470 6.4e-07 57.0 77 45.5
Phvul.008G282500 Phaseolus vulgaris HOM05D001140 ORTHO05D000470 6.4e-07 57.0 84 41.7
QL08p001496 Quercus lobata HOM05D001140 ORTHO05D000470 6.4e-07 57.0 106 35.8
Solyc07g065960.1 Solanum lycopersicum HOM05D001140 ORTHO05D000470 6.4e-07 57.0 80 43.8
Sopen07g034160 Solanum pennellii HOM05D001140 ORTHO05D000470 6.4e-07 57.0 80 43.8
BcaC05g29190 Brassica carinata HOM05D001140 ORTHO05D000470 8.3e-07 56.6 76 44.7
C05p54610 Brassica napus HOM05D001140 ORTHO05D000470 8.3e-07 56.6 76 44.7
BolC5t34126H Brassica oleracea HOM05D001140 ORTHO05D000470 8.3e-07 56.6 76 44.7
BraA05t22431Z Brassica rapa HOM05D001140 ORTHO05D000470 8.3e-07 56.6 76 44.7
THA.LOC104822708 Tarenaya hassleriana HOM05D001140 ORTHO05D000470 8.3e-07 56.6 75 45.3
AL3G25130 Arabidopsis lyrata HOM05D001140 ORTHO05D000470 1.1e-06 56.2 76 44.7
AT3G13310 Arabidopsis thaliana HOM05D001140 ORTHO05D000470 1.1e-06 56.2 76 44.7
Hma1.2p1_0193F.1_g084150 Hydrangea macrophylla HOM05D001140 ORTHO05D000470 1.4e-06 55.8 93 39.8
MBI15_g12947_MAGBIO Magnolia biondii HOM05D001140 ORTHO05D000470 1.4e-06 55.8 71 45.1
Oeu049456.1 Olea europaea HOM05D001140 ORTHO05D000470 1.4e-06 55.8 94 39.4
EL10Ac4g07506 Beta vulgaris HOM05D001140 ORTHO05D000470 1.9e-06 55.5 90 42.2
CANSAT11G2356 Cannabis sativa HOM05D001140 ORTHO05D000470 1.9e-06 55.5 82 42.7
Lj1P898T69 Lonicera japonica HOM05D001140 ORTHO05D000470 1.9e-06 55.5 61 45.9
Medtr3g061170 Medicago truncatula HOM05D001140 ORTHO05D000470 1.9e-06 55.5 85 41.2
Nitab4.5_0000152g0180 Nicotiana tabacum HOM05D001140 ORTHO05D000470 1.9e-06 55.5 86 40.7
QL05p066370 Quercus lobata HOM05D001140 ORTHO05D000470 1.9e-06 55.5 79 40.5
Rhsim04G0009300 Rhododendron simsii HOM05D001140 ORTHO05D000470 1.9e-06 55.5 74 48.6
BcaB04g21008 Brassica carinata HOM05D001140 ORTHO05D000470 2.4e-06 55.1 76 43.4
BcaC09g48299 Brassica carinata HOM05D001140 ORTHO05D000470 2.4e-06 55.1 76 43.4
BcaC09g48300 Brassica carinata HOM05D001140 ORTHO05D000470 2.4e-06 55.1 76 43.4
CARHR087920 Cardamine hirsuta HOM05D001140 ORTHO05D000470 2.4e-06 55.1 76 43.4
Thhalv10021681m.g Eutrema salsugineum HOM05D001140 ORTHO05D000470 2.4e-06 55.1 76 43.4
Oeu013019.2 Olea europaea HOM05D001140 ORTHO05D000470 2.4e-06 55.1 63 47.6
Ca_14852_v3 Cicer arietinum L. HOM05D001140 ORTHO05D000470 3.2e-06 54.7 85 40.0
Migut.M01597 Erythranthe guttata HOM05D001140 ORTHO05D000470 3.2e-06 54.7 89 39.3
Eucgr.L03039 Eucalyptus grandis HOM05D001140 ORTHO05D000470 3.2e-06 54.7 72 45.8
Lalb_Chr18g0050401 Lupinus albus HOM05D001140 ORTHO05D000470 3.2e-06 54.7 86 40.7
SGA_v2.0_scaffold1831G54046 Striga asiatica HOM05D001140 ORTHO05D000470 3.2e-06 54.7 87 40.2
CDE02G1492 Ceratophyllum demersum HOM05D001140 ORTHO05D000470 4.1e-06 54.3 74 43.2
HanXRQChr05g0160201 Helianthus annuus HOM05D001140 ORTHO05D000470 4.1e-06 54.3 76 44.7
MBI14_g30660_MAGBIO Magnolia biondii HOM05D001140 ORTHO05D000470 4.1e-06 54.3 70 42.9
Nn1g08423 Nelumbo nucifera HOM05D001140 ORTHO05D000470 4.1e-06 54.3 82 43.9
Sp3g11510 Schrenkiella parvula HOM05D001140 ORTHO05D000470 4.1e-06 54.3 76 43.4
TAR624G0501 Trochodendron aralioides HOM05D001140 ORTHO05D000470 4.1e-06 54.3 72 43.1
BcaB06g25473 Brassica carinata HOM05D001140 ORTHO05D000470 5.4e-06 53.9 77 41.6
BolC3t16897H Brassica oleracea HOM05D001140 ORTHO05D000470 7.0e-06 53.5 77 41.6
CSS0035443 Camellia sinensis var. sinensis HOM05D001140 ORTHO05D000470 7.0e-06 53.5 76 42.1
CDE11G0698 Ceratophyllum demersum HOM05D001140 ORTHO05D000470 7.0e-06 53.5 73 43.8
Potri.007G107600 Populus trichocarpa HOM05D001140 ORTHO05D000470 7.0e-06 53.5 79 43.0
CiPaw.10G084300 Carya illinoinensis HOM05D001140 ORTHO05D000470 9.2e-06 53.1 81 42.0
Eucgr.D00958 Eucalyptus grandis HOM05D001140 ORTHO05D000470 9.2e-06 53.1 72 45.8
Gorai.009G453600 Gossypium raimondii HOM05D001140 ORTHO05D000470 9.2e-06 53.1 67 49.3
Potri.011G166500 Populus trichocarpa HOM05D001140 ORTHO05D000470 9.2e-06 53.1 87 43.7
TAR627G0433 Trochodendron aralioides HOM05D001140 ORTHO05D000470 9.2e-06 53.1 87 39.1


User provided reference genes

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