Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10023923m.g Citrus clementina HOM05D005139 ORTHO05D006125 6.1e-79 297.4 144 100.0
Ciclev10023736m.g Citrus clementina HOM05D005139 ORTHO05D006125 3.8e-73 278.1 144 93.8
Ciclev10023690m.g Citrus clementina HOM05D005139 ORTHO05D006125 7.5e-61 237.3 152 79.6
Ciclev10019589m.g Citrus clementina HOM05D005139 ORTHO05D006125 9.8e-61 236.9 152 79.6
Atru.chr2.2128 Acer truncatum HOM05D005139 ORTHO05D006125 8.3e-60 233.8 152 78.3
Ca_28352_v3 Cicer arietinum L. HOM05D005139 ORTHO05D006125 8.3e-60 233.8 149 78.5
Lj3g0013017 Lotus japonicus HOM05D005139 ORTHO05D006125 1.1e-59 233.4 153 77.8
Psat4g140160 Pisum sativum HOM05D005139 ORTHO05D006125 9.2e-59 230.3 152 76.3
Lalb_Chr03g0031181 Lupinus albus HOM05D005139 ORTHO05D006125 7.8e-58 227.3 152 76.3
CiPaw.11G159600 Carya illinoinensis HOM05D005139 ORTHO05D006125 1.3e-57 226.5 152 75.7
Manes.15G095700 Manihot esculenta HOM05D005139 ORTHO05D006125 1.3e-57 226.5 152 75.0
THA.LOC104812316 Tarenaya hassleriana HOM05D005139 ORTHO05D006125 2.3e-57 225.7 152 74.3
Phvul.011G165500 Phaseolus vulgaris HOM05D005139 ORTHO05D006125 2.9e-57 225.3 152 75.7
Cfa019555 Carpinus fangiana HOM05D005139 ORTHO05D006125 3.8e-57 224.9 155 72.9
Thhalv10018370m.g Eutrema salsugineum HOM05D005139 ORTHO05D006125 3.8e-57 224.9 152 74.3
TWI38G1771 Tripterygium wilfordii HOM05D005139 ORTHO05D006125 5.0e-57 224.6 152 74.3
BcaB03g16034 Brassica carinata HOM05D005139 ORTHO05D006125 8.6e-57 223.8 152 73.7
GSVIVG01014182001 Vitis vinifera HOM05D005139 ORTHO05D006125 8.6e-57 223.8 152 75.0
MD11G1264600 Malus domestica HOM05D005139 ORTHO05D006125 1.1e-56 223.4 152 73.0
Eucgr.F01248 Eucalyptus grandis HOM05D005139 ORTHO05D006125 1.5e-56 223.0 152 73.7
PGR083G0616 Punica granatum HOM05D005139 ORTHO05D006125 1.5e-56 223.0 152 73.7
Aa31LG4G2260 Aethionema arabicum HOM05D005139 ORTHO05D006125 1.9e-56 222.6 152 73.7
Glyma.06G228700 Glycine max HOM05D005139 ORTHO05D006125 1.9e-56 222.6 152 74.3
A07p43980 Brassica napus HOM05D005139 ORTHO05D006125 2.5e-56 222.2 152 73.0
BraA07t31905Z Brassica rapa HOM05D005139 ORTHO05D006125 2.5e-56 222.2 152 73.0
VMungo1127G1423 Vigna mungo HOM05D005139 ORTHO05D006125 2.5e-56 222.2 152 75.0
Glyma.12G156300 Glycine max HOM05D005139 ORTHO05D006125 3.3e-56 221.9 152 74.3
Duzib213G0634 Durio zibethinus HOM05D005139 ORTHO05D006125 4.3e-56 221.5 152 73.0
Sp5g33790 Schrenkiella parvula HOM05D005139 ORTHO05D006125 4.3e-56 221.5 152 72.4
TPR.G5772 Trifolium pratense HOM05D005139 ORTHO05D006125 4.3e-56 221.5 153 73.2
Prupe.4G161700 Prunus persica HOM05D005139 ORTHO05D006125 9.5e-56 220.3 152 73.0
COL.COLO4_17530 Corchorus olitorius HOM05D005139 ORTHO05D006125 1.2e-55 219.9 152 71.7
BcaC08g47457 Brassica carinata HOM05D005139 ORTHO05D006125 2.1e-55 219.2 152 72.4
C06p52650 Brassica napus HOM05D005139 ORTHO05D006125 2.1e-55 219.2 152 72.4
Dinv18369 Davidia involucrata HOM05D005139 ORTHO05D006125 2.1e-55 219.2 152 73.7
Potri.011G108800 Populus trichocarpa HOM05D005139 ORTHO05D006125 2.1e-55 219.2 152 73.0
Sabra11G0096100 Salix brachista HOM05D005139 ORTHO05D006125 2.1e-55 219.2 152 73.0
PSO063G5899 Papaver somniferum HOM05D005139 ORTHO05D006125 2.8e-55 218.8 152 73.0
PSO782G2705 Papaver somniferum HOM05D005139 ORTHO05D006125 2.8e-55 218.8 152 73.0
AL2G39160 Arabidopsis lyrata HOM05D005139 ORTHO05D006125 6.1e-55 217.6 152 73.0
Carub.0002s2560 Capsella rubella HOM05D005139 ORTHO05D006125 6.1e-55 217.6 152 73.0
Cc05_g10990 Coffea canephora HOM05D005139 ORTHO05D006125 6.1e-55 217.6 152 71.7
Nitab4.5_0000035g0250 Nicotiana tabacum HOM05D005139 ORTHO05D006125 6.1e-55 217.6 152 71.7
Sopen12g006100 Solanum pennellii HOM05D005139 ORTHO05D006125 6.1e-55 217.6 152 71.7
Solyc12g014320.2 Solanum lycopersicum HOM05D005139 ORTHO05D006125 8.0e-55 217.2 152 71.7
Thecc.07G118200 Theobroma cacao HOM05D005139 ORTHO05D006125 8.0e-55 217.2 152 73.0
AT1G78770 Arabidopsis thaliana HOM05D005139 ORTHO05D006125 1.0e-54 216.9 152 72.4
ECA236G1068 Erigeron canadensis HOM05D005139 ORTHO05D006125 1.0e-54 216.9 152 72.4
Lsat_1_v5_gn_7_102480 Lactuca sativa HOM05D005139 ORTHO05D006125 1.0e-54 216.9 152 73.0
CAN.G443.5 Capsicum annuum HOM05D005139 ORTHO05D006125 1.4e-54 216.5 152 71.1
Gohir.D01G042704 Gossypium hirsutum HOM05D005139 ORTHO05D006125 1.4e-54 216.5 152 70.4
Gorai.002G053800 Gossypium raimondii HOM05D005139 ORTHO05D006125 1.4e-54 216.5 152 70.4
Nitab4.5_0007851g0020 Nicotiana tabacum HOM05D005139 ORTHO05D006125 1.4e-54 216.5 152 71.1
Potri.001G389300 Populus trichocarpa HOM05D005139 ORTHO05D006125 1.4e-54 216.5 152 71.7
SGA_v2.0_scaffold130G34288 Striga asiatica HOM05D005139 ORTHO05D006125 1.4e-54 216.5 152 71.7
CARHR072310 Cardamine hirsuta HOM05D005139 ORTHO05D006125 1.8e-54 216.1 152 72.4
DCAR_013162 Daucus carota HOM05D005139 ORTHO05D006125 2.3e-54 215.7 152 70.4
Peaxi162Scf00000g06812 Petunia axillaris HOM05D005139 ORTHO05D006125 2.3e-54 215.7 152 71.1
CANSAT35G0508 Cannabis sativa HOM05D005139 ORTHO05D006125 4.0e-54 214.9 152 71.1
Dinv15003 Davidia involucrata HOM05D005139 ORTHO05D006125 4.0e-54 214.9 152 73.0
TAR626G0095 Trochodendron aralioides HOM05D005139 ORTHO05D006125 4.0e-54 214.9 152 71.1
CSS0042561 Camellia sinensis var. sinensis HOM05D005139 ORTHO05D006125 6.8e-54 214.2 152 73.0
Migut.H02003 Erythranthe guttata HOM05D005139 ORTHO05D006125 6.8e-54 214.2 152 71.7
Gohir.A01G053400 Gossypium hirsutum HOM05D005139 ORTHO05D006125 6.8e-54 214.2 152 69.7
Aqoxy3G02037 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 8.9e-54 213.8 152 71.7
Haze_09316 Corylus avellana HOM05D005139 ORTHO05D006125 8.9e-54 213.8 187 62.6
SalBow7G0115 Salvia bowleyana HOM05D005139 ORTHO05D006125 1.2e-53 213.4 152 71.7
SalBow7G2844 Salvia bowleyana HOM05D005139 ORTHO05D006125 1.2e-53 213.4 152 71.7
EL10Ac4g08361 Beta vulgaris HOM05D005139 ORTHO05D006125 2.0e-53 212.6 155 68.4
Actinidia12584 Actinidia chinensis HOM05D005139 ORTHO05D006125 2.6e-53 212.2 152 72.4
HanXRQChr15g0495211 Helianthus annuus HOM05D005139 ORTHO05D006125 3.4e-53 211.8 155 69.7
Hund10469 Selenicereus undatus HOM05D005139 ORTHO05D006125 1.3e-52 209.9 152 69.1
AUR62037557 Chenopodium quinoa HOM05D005139 ORTHO05D006125 1.7e-52 209.5 155 67.7
Oeu005379.1 Olea europaea HOM05D005139 ORTHO05D006125 1.7e-52 209.5 152 69.7
Sed0024992 Sechium edule HOM05D005139 ORTHO05D006125 2.2e-52 209.1 152 71.1
Aqoxy4G00276 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 1.4e-51 206.5 152 67.8
arahy.Tifrunner.gnm1.ann1.405FF9 Arachis hypogaea HOM05D005139 ORTHO05D006125 1.4e-51 206.5 152 71.1
arahy.Tifrunner.gnm1.ann1.J0RB3X Arachis hypogaea HOM05D005139 ORTHO05D006125 1.4e-51 206.5 152 71.1
HanXRQChr11g0331031 Helianthus annuus HOM05D005139 ORTHO05D006125 1.8e-51 206.1 152 69.7
ClCG04G002160 Citrullus lanatus HOM05D005139 ORTHO05D006125 4.1e-51 204.9 152 69.1
MELO3C008916.2 Cucumis melo HOM05D005139 ORTHO05D006125 4.1e-51 204.9 152 69.1
CsaV3_4G030530 Cucumis sativus L. HOM05D005139 ORTHO05D006125 4.1e-51 204.9 152 69.1
Lj8A148G34 Lonicera japonica HOM05D005139 ORTHO05D006125 4.1e-51 204.9 174 63.8
FAN11G0516 Fragaria x ananassa HOM05D005139 ORTHO05D006125 1.2e-50 203.4 152 67.1
BolC6t40284H Brassica oleracea HOM05D005139 ORTHO05D006125 2.3e-49 199.1 139 71.2
FvH4_3g18210 Fragaria vesca HOM05D005139 ORTHO05D006125 3.0e-49 198.7 152 66.4
FAN16G0871 Fragaria x ananassa HOM05D005139 ORTHO05D006125 3.0e-49 198.7 152 66.4
Ah.04g164210 Amaranthus hybridus HOM05D005139 ORTHO05D006125 3.9e-49 198.4 155 65.2
ATR0127G028 Amborella trichopoda HOM05D005139 ORTHO05D006125 3.9e-49 198.4 152 65.1
HPP92_004206 Vanilla planifolia HOM05D005139 ORTHO05D006125 3.9e-49 198.4 152 65.1
RcHm_v2.0_Chr5g0030761 Rosa chinensis HOM05D005139 ORTHO05D006125 5.0e-49 198.0 152 65.8
FAN21G0160 Fragaria x ananassa HOM05D005139 ORTHO05D006125 1.1e-48 196.8 151 66.2
FAN25G1917 Fragaria x ananassa HOM05D005139 ORTHO05D006125 1.5e-48 196.4 152 65.1
Sc03g0010570 Simmondsia chinensis HOM05D005139 ORTHO05D006125 1.5e-48 196.4 152 65.8
QL08p026113 Quercus lobata HOM05D005139 ORTHO05D006125 1.9e-48 196.1 149 68.5
vmacro11947 Vaccinium macrocarpon HOM05D005139 ORTHO05D006125 3.6e-47 191.8 223 50.7
Cpa.g.sc77.24 Carica papaya HOM05D005139 ORTHO05D006125 6.2e-47 191.0 127 74.8
MBI06_g15765_MAGBIO Magnolia biondii HOM05D005139 ORTHO05D006125 6.2e-47 191.0 144 68.1
AUR62019588 Chenopodium quinoa HOM05D005139 ORTHO05D006125 1.1e-46 190.3 139 67.6
SHI27616 Sapria himalayana HOM05D005139 ORTHO05D006125 2.9e-44 182.2 152 61.8
Os03g0236966 Oryza sativa ssp. japonica HOM05D005139 ORTHO05D006125 1.2e-42 176.8 152 59.2
Medtr8g058380 Medicago truncatula HOM05D005139 ORTHO05D006125 1.6e-42 176.4 153 62.1
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 6.6e-41 171.0 134 65.7
MD00G1077100 Malus domestica HOM05D005139 ORTHO05D006125 1.1e-40 170.2 146 63.7
Zm00001eb399210 Zea mays HOM05D005139 ORTHO05D006125 3.1e-38 162.2 152 57.2
Pp3c16_8790 Physcomitrium patens HOM05D005139 ORTHO05D006125 7.1e-35 151.0 153 51.6
CDE06G2579 Ceratophyllum demersum HOM05D005139 ORTHO05D006125 2.1e-34 149.4 127 59.8
Mapoly0145s0019 Marchantia polymorpha HOM05D005139 ORTHO05D006125 1.7e-33 146.4 154 52.6
Aqoxy256s002 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 5.1e-33 144.8 109 69.7
MD03G1275800 Malus domestica HOM05D005139 ORTHO05D006125 5.1e-33 144.8 83 81.9
CBR_g50375 Chara braunii HOM05D005139 ORTHO05D006125 4.4e-29 131.7 150 46.7
SMO244G0086 Selaginella moellendorffii HOM05D005139 ORTHO05D006125 4.2e-19 98.6 146 40.4
C03p92750 Brassica napus HOM05D005139 ORTHO05D006125 1.5e-16 90.1 59 71.2
Prupe.4G162300 Prunus persica HOM05D005139 ORTHO05D006125 2.5e-16 89.4 53 81.1
Cre13.g562950 Chlamydomonas reinhardtii HOM05D005139 ORTHO05D006125 3.4e-13 79.0 141 32.6
AagrBONN_evm.TU.Sc2ySwM_368.2003 Anthoceros agrestis HOM05D005139 ORTHO05D006125 5.8e-13 78.2 94 44.7
MD03G1275700 Malus domestica HOM05D005139 ORTHO05D006125 1.0e-09 67.4 38 84.2
MCO01G684 Micromonas commoda HOM05D005139 ORTHO05D006125 1.6e-07 60.1 68 45.6
PRCOL_00005307 Prasinoderma coloniale HOM05D005139 ORTHO05D006125 1.4e-06 57.0 193 26.9


User provided reference genes

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