Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10023317m.g Citrus clementina HOM05D008433 ORTHO05D009918 3.6e-75 285.0 164 100.0
Cfa004661 Carpinus fangiana HOM05D008433 ORTHO05D009918 2.2e-16 89.7 169 34.9
Atru.chr5.753 Acer truncatum HOM05D008433 ORTHO05D009918 3.2e-15 85.9 158 49.4
CiPaw.01G081400 Carya illinoinensis HOM05D008433 ORTHO05D009918 7.8e-14 81.3 155 43.9
AUR62004552 Chenopodium quinoa HOM05D008433 ORTHO05D009918 3.6e-11 72.4 156 33.3
Duzib138G0947 Durio zibethinus HOM05D008433 ORTHO05D009918 8.1e-11 71.2 85 49.4
Prupe.2G196100 Prunus persica HOM05D013717 ORTHO05D009918 3.1e-10 69.3 173 32.9
Lj1g0005818 Lotus japonicus HOM05D008433 ORTHO05D009918 1.5e-09 67.0 79 45.6
AUR62022666 Chenopodium quinoa HOM05D008433 ORTHO05D009918 2.0e-09 66.6 150 33.3
VMungo1309G0842 Vigna mungo HOM05D008433 ORTHO05D009918 4.4e-09 65.5 131 42.7
CANSAT56G3323 Cannabis sativa HOM05D013717 ORTHO05D009918 5.8e-09 65.1 172 30.2
Thecc.01G334700 Theobroma cacao HOM05D008433 ORTHO05D009918 5.8e-09 65.1 83 49.4
Cpa.g.sc141.14 Carica papaya HOM05D008433 ORTHO05D009918 9.9e-09 64.3 83 39.8
GSVIVG01027424001 Vitis vinifera HOM05D000145 ORTHO05D000115 1.7e-08 63.5 167 38.9
CANSAT56G2967 Cannabis sativa HOM05D013717 ORTHO05D009918 2.9e-08 62.8 144 42.4
Oeu046652.1 Olea europaea HOM05D008433 ORTHO05D009918 3.8e-08 62.4 81 45.7
TWI14G1180 Tripterygium wilfordii HOM05D008433 ORTHO05D009918 3.8e-08 62.4 167 34.1
TAR629G1417 Trochodendron aralioides HOM05D008433 ORTHO05D009918 4.9e-08 62.0 133 44.4
Oeu015062.1 Olea europaea HOM05D008433 ORTHO05D009918 6.4e-08 61.6 81 43.2
Hma1.2p1_1697F.1_g298100 Hydrangea macrophylla HOM05D008433 ORTHO05D009918 8.4e-08 61.2 114 43.9
TPR.G22611 Trifolium pratense HOM05D008433 ORTHO05D009918 8.4e-08 61.2 120 31.7
Psat3g000840 Pisum sativum HOM05D008433 ORTHO05D009918 1.1e-07 60.8 147 39.5
Gohir.A11G100200 Gossypium hirsutum HOM05D008433 ORTHO05D009918 1.4e-07 60.5 81 44.4
Phvul.009G257200 Phaseolus vulgaris HOM05D008433 ORTHO05D009918 1.4e-07 60.5 131 35.1
Rhsim01G0179000 Rhododendron simsii HOM05D008433 ORTHO05D009918 1.9e-07 60.1 195 35.4
Sed0019953 Sechium edule HOM05D029570 ORTHO05D009918 2.4e-07 59.7 159 31.4
Gohir.D11G104900 Gossypium hirsutum HOM05D008433 ORTHO05D009918 4.2e-07 58.9 81 43.2
Gorai.007G112200 Gossypium raimondii HOM05D008433 ORTHO05D009918 4.2e-07 58.9 81 43.2
Potri.002G178100 Populus trichocarpa HOM05D008433 ORTHO05D009918 5.4e-07 58.5 81 54.3
CSS0049417 Camellia sinensis var. sinensis HOM05D008433 ORTHO05D009918 7.1e-07 58.2 156 34.0
PGR031G3198 Punica granatum HOM05D008433 ORTHO05D009918 9.3e-07 57.8 81 39.5
Glyma.19G259100 Glycine max HOM05D008433 ORTHO05D009918 1.2e-06 57.4 130 40.0
Manes.05G017500 Manihot esculenta HOM05D008433 ORTHO05D009918 3.5e-06 55.8 95 40.0
FAN03G0231 Fragaria x ananassa HOM05D013717 ORTHO05D009918 7.8e-06 54.7 83 36.1
Sabra02G0135500 Salix brachista HOM05D008433 ORTHO05D009918 7.8e-06 54.7 85 49.4


User provided reference genes

Program Settings