Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10022879m.g Citrus clementina HOM05D009510 ORTHO05D010335 1.2e-62 243.0 124 100.0
Atru.chr9.1339 Acer truncatum HOM05D009510 ORTHO05D010335 1.7e-21 106.3 114 56.1
Potri.001G122600 Populus trichocarpa HOM05D009510 ORTHO05D010335 1.2e-17 93.6 185 37.8
GSVIVG01001306001 Vitis vinifera HOM05D009510 ORTHO05D010335 1.1e-15 87.0 98 46.9
Sabra01G0094500 Salix brachista HOM05D009510 ORTHO05D010335 5.9e-14 81.3 98 50.0
Prupe.5G072500 Prunus persica HOM05D015618 ORTHO05D010335 2.2e-13 79.3 164 37.2
Dinv21618 Davidia involucrata HOM05D009510 ORTHO05D010335 3.8e-13 78.6 103 45.6
Duzib068G0669 Durio zibethinus HOM05D009510 ORTHO05D010335 5.0e-13 78.2 101 49.5
Thecc.03G254000 Theobroma cacao HOM05D009510 ORTHO05D010335 2.5e-12 75.9 102 46.1
Gohir.A08G172100 Gossypium hirsutum HOM05D009510 ORTHO05D010335 3.2e-12 75.5 97 47.4
Gorai.004G200500 Gossypium raimondii HOM05D009510 ORTHO05D010335 4.2e-12 75.1 97 47.4
Gohir.D08G190400 Gossypium hirsutum HOM05D009510 ORTHO05D010335 1.2e-11 73.6 97 46.4
Hma1.2p1_0753F.1_g212990 Hydrangea macrophylla HOM05D009510 ORTHO05D010335 1.2e-11 73.6 191 34.0
Duzib205G1076 Durio zibethinus HOM05D009510 ORTHO05D010335 3.6e-11 72.0 98 48.0
Solyc08g078840.3 Solanum lycopersicum HOM05D012984 ORTHO05D010335 3.6e-11 72.0 145 36.6
Dinv39126 Davidia involucrata HOM05D009510 ORTHO05D010335 6.1e-11 71.2 115 40.0
CiPaw.12G108600 Carya illinoinensis HOM05D009510 ORTHO05D010335 1.0e-10 70.5 184 32.1
PGSC0003DMG400004801 Solanum tuberosum HOM05D012984 ORTHO05D010335 1.4e-10 70.1 152 30.9
Nitab4.5_0002727g0010 Nicotiana tabacum HOM05D012984 ORTHO05D010335 1.8e-10 69.7 146 37.0
Nitab4.5_0000312g0200 Nicotiana tabacum HOM05D012984 ORTHO05D010335 3.0e-10 68.9 152 35.5
CSS0028488 Camellia sinensis var. sinensis HOM05D009510 ORTHO05D010335 1.2e-09 67.0 54 66.7
TWI81G0126 Tripterygium wilfordii HOM05D009510 ORTHO05D010335 1.2e-09 67.0 99 43.4
Manes.01G079300 Manihot esculenta HOM05D009510 ORTHO05D010335 1.5e-09 66.6 181 32.6
Glyma.01G210300 Glycine max HOM05D013054 ORTHO05D010335 3.4e-09 65.5 172 30.8
Cfa012745 Carpinus fangiana HOM05D009510 ORTHO05D010335 5.7e-09 64.7 118 35.6
vmacro00232 Vaccinium macrocarpon HOM05D009510 ORTHO05D010335 7.5e-09 64.3 57 57.9
Gohir.A12G220001 Gossypium hirsutum HOM05D009510 ORTHO05D010335 9.8e-09 63.9 104 40.4
PGR042G1660 Punica granatum HOM05D015618 ORTHO05D010335 9.8e-09 63.9 145 36.6
Haze_07883 Corylus avellana HOM05D009510 ORTHO05D010335 1.7e-08 63.2 46 69.6
DCAR_027783 Daucus carota HOM05D009510 ORTHO05D010335 2.2e-08 62.8 51 54.9
Gohir.D12G222201 Gossypium hirsutum HOM05D009510 ORTHO05D010335 2.2e-08 62.8 98 42.9
Gorai.008G238200 Gossypium raimondii HOM05D009510 ORTHO05D010335 2.2e-08 62.8 98 42.9
HanXRQChr03g0088641 Helianthus annuus HOM05D012984 ORTHO05D010335 2.2e-08 62.8 153 34.6
Glyma.11G031700 Glycine max HOM05D013054 ORTHO05D010335 3.7e-08 62.0 53 56.6
Migut.A00962 Erythranthe guttata HOM05D012984 ORTHO05D010335 6.3e-08 61.2 59 50.8
Psat0s3774g0040 Pisum sativum HOM05D013054 ORTHO05D010335 1.1e-07 60.5 139 38.1
Sopen08g027300 Solanum pennellii HOM05D012984 ORTHO05D010335 1.4e-07 60.1 47 63.8
CAN.G1218.11 Capsicum annuum HOM05D012984 ORTHO05D010335 1.8e-07 59.7 48 62.5
MD00G1115000 Malus domestica HOM05D015618 ORTHO05D010335 2.4e-07 59.3 170 32.9
DCAR_006823 Daucus carota HOM05D009510 ORTHO05D010335 3.1e-07 58.9 54 51.9
Aqoxy7G00746 Aquilegia oxysepala HOM05D009510 ORTHO05D010335 4.1e-07 58.5 101 32.7
ClCG10G002770 Citrullus lanatus HOM05D040458 ORTHO05D010335 4.1e-07 58.5 136 33.1
CsaV3_3G002810 Cucumis sativus L. HOM05D040458 ORTHO05D010335 4.1e-07 58.5 34 76.5
DCAR_004946 Daucus carota HOM05D012984 ORTHO05D010335 5.4e-07 58.2 157 29.3
ECA240G2875 Erigeron canadensis HOM05D012984 ORTHO05D010335 5.4e-07 58.2 100 40.0
Phvul.002G062100 Phaseolus vulgaris HOM05D013054 ORTHO05D010335 7.0e-07 57.8 157 31.8
RcHm_v2.0_Chr7g0202891 Rosa chinensis HOM05D015618 ORTHO05D010335 2.0e-06 56.2 109 38.5
VMungo1215G2077 Vigna mungo HOM05D013054 ORTHO05D010335 2.0e-06 56.2 166 31.9
Lsat_1_v5_gn_6_91520 Lactuca sativa HOM05D012984 ORTHO05D010335 4.5e-06 55.1 147 30.6
Lj2g0024641 Lotus japonicus HOM05D013054 ORTHO05D010335 4.5e-06 55.1 55 47.3
Nn6g33998 Nelumbo nucifera HOM05D013054 ORTHO05D010335 5.9e-06 54.7 67 47.8


User provided reference genes

Program Settings