Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10022632m.g Citrus clementina HOM05D006065 ORTHO05D007672 1.0e-82 310.1 159 100.0
Atru.chr5.461 Acer truncatum HOM05D006065 ORTHO05D007672 1.2e-54 216.9 163 69.9
Thecc.01G360200 Theobroma cacao HOM05D006065 ORTHO05D007672 7.3e-41 171.0 159 58.5
CiPaw.01G060100 Carya illinoinensis HOM05D006065 ORTHO05D007672 1.4e-36 156.8 135 60.7
Gohir.A08G131000 Gossypium hirsutum HOM05D006065 ORTHO05D007672 4.1e-36 155.2 156 55.8
Cpa.g.sc18.247 Carica papaya HOM05D006065 ORTHO05D007672 2.1e-35 152.9 163 52.8
Dinv43807 Davidia involucrata HOM05D006065 ORTHO05D007672 4.6e-35 151.8 137 59.9
Duzib133G1075 Durio zibethinus HOM05D006065 ORTHO05D007672 4.6e-35 151.8 156 55.8
Sabra14G0060500 Salix brachista HOM05D006065 ORTHO05D007672 1.0e-34 150.6 127 63.0
Actinidia10016 Actinidia chinensis HOM05D006065 ORTHO05D007672 3.0e-34 149.1 137 58.4
Gorai.004G158400 Gossypium raimondii HOM05D006065 ORTHO05D007672 3.9e-34 148.7 156 53.8
Potri.014G083100 Populus trichocarpa HOM05D006065 ORTHO05D007672 5.1e-34 148.3 145 57.9
Duzib138G1923 Durio zibethinus HOM05D006065 ORTHO05D007672 6.6e-34 147.9 156 53.8
Cfa003936 Carpinus fangiana HOM05D006065 ORTHO05D007672 1.9e-33 146.4 164 54.3
QL08p049008 Quercus lobata HOM05D006065 ORTHO05D007672 1.9e-33 146.4 140 57.9
Dinv32472 Davidia involucrata HOM05D006065 ORTHO05D007672 2.5e-33 146.0 140 58.6
Gohir.D08G152500 Gossypium hirsutum HOM05D006065 ORTHO05D007672 2.5e-33 146.0 156 52.6
COL.COLO4_12704 Corchorus olitorius HOM05D006065 ORTHO05D007672 4.3e-33 145.2 129 58.1
Gorai.007G098900 Gossypium raimondii HOM05D006065 ORTHO05D007672 5.6e-33 144.8 147 55.8
TAR629G3005 Trochodendron aralioides HOM05D006065 ORTHO05D007672 1.6e-32 143.3 142 54.9
TWI59G0879 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 4.7e-32 141.7 171 53.2
Actinidia20914 Actinidia chinensis HOM05D006065 ORTHO05D007672 5.2e-31 138.3 133 54.9
Manes.05G035300 Manihot esculenta HOM05D006065 ORTHO05D007672 5.8e-30 134.8 140 55.0
DCAR_006926 Daucus carota HOM05D006065 ORTHO05D007672 7.6e-30 134.4 138 55.1
CANSAT56G3634 Cannabis sativa HOM05D006065 ORTHO05D007672 1.7e-29 133.3 162 50.0
Haze_15490 Corylus avellana HOM05D006065 ORTHO05D007672 2.9e-29 132.5 185 45.4
THA.LOC104817023 Tarenaya hassleriana HOM05D006065 ORTHO05D007672 8.4e-29 131.0 159 48.4
Prupe.2G168300 Prunus persica HOM05D006065 ORTHO05D007672 1.4e-28 130.2 136 54.4
TWI14G0791 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 4.1e-28 128.6 164 49.4
Sabra02G0126300 Salix brachista HOM05D006065 ORTHO05D007672 9.2e-28 127.5 126 55.6
GSVIVG01018349001 Vitis vinifera HOM05D006065 ORTHO05D007672 9.2e-28 127.5 117 57.3
TAR374G1295 Trochodendron aralioides HOM05D006065 ORTHO05D007672 1.6e-27 126.7 150 48.0
Gohir.A11G088300 Gossypium hirsutum HOM05D006065 ORTHO05D007672 1.0e-26 124.0 147 49.7
Medtr7g076690 Medicago truncatula HOM05D006065 ORTHO05D007672 1.0e-26 124.0 151 47.0
ClCG05G001580 Citrullus lanatus HOM05D006065 ORTHO05D007672 3.9e-26 122.1 141 52.5
Gohir.D11G092600 Gossypium hirsutum HOM05D006065 ORTHO05D007672 5.1e-26 121.7 147 49.7
GSVIVG01026900001 Vitis vinifera HOM05D006065 ORTHO05D007672 5.1e-26 121.7 117 55.6
CiPaw.02G030100 Carya illinoinensis HOM05D006065 ORTHO05D007672 6.6e-26 121.3 121 56.2
Hma1.2p1_0001F.1_g001420 Hydrangea macrophylla HOM05D006065 ORTHO05D007672 8.6e-26 120.9 173 46.8
Migut.N01441 Erythranthe guttata HOM05D006065 ORTHO05D007672 1.1e-25 120.6 139 48.2
CsaV3_3G008970 Cucumis sativus L. HOM05D006065 ORTHO05D007672 1.9e-25 119.8 144 50.0
Manes.01G258100 Manihot esculenta HOM05D006065 ORTHO05D007672 1.9e-25 119.8 128 54.7
vmacro13279 Vaccinium macrocarpon HOM05D006065 ORTHO05D007672 1.9e-25 119.8 141 52.5
MBI18_g21561_MAGBIO Magnolia biondii HOM05D006065 ORTHO05D007672 2.5e-25 119.4 138 46.4
Oeu010611.1 Olea europaea HOM05D006065 ORTHO05D007672 3.3e-25 119.0 143 49.0
PGR031G0376 Punica granatum HOM05D006065 ORTHO05D007672 5.6e-25 118.2 167 43.1
VMungo1383G0981 Vigna mungo HOM05D006065 ORTHO05D007672 7.3e-25 117.9 129 51.2
arahy.Tifrunner.gnm1.ann1.QD83TI Arachis hypogaea HOM05D006065 ORTHO05D007672 2.1e-24 116.3 132 47.7
HanXRQChr13g0426531 Helianthus annuus HOM05D006065 ORTHO05D007672 2.8e-24 115.9 132 50.0
Lalb_Chr19g0127061 Lupinus albus HOM05D006065 ORTHO05D007672 2.8e-24 115.9 128 50.8
Lj1g0009386 Lotus japonicus HOM05D006065 ORTHO05D007672 3.6e-24 115.5 130 52.3
Lsat_1_v5_gn_7_4500 Lactuca sativa HOM05D006065 ORTHO05D007672 8.1e-24 114.4 129 51.9
Sed0025321 Sechium edule HOM05D006065 ORTHO05D007672 1.1e-23 114.0 142 48.6
Glyma.18G230000 Glycine max HOM05D006065 ORTHO05D007672 1.4e-23 113.6 135 51.1
Ca_07890_v3 Cicer arietinum L. HOM05D006065 ORTHO05D007672 1.8e-23 113.2 151 45.0
Glyma.09G262200 Glycine max HOM05D006065 ORTHO05D007672 3.1e-23 112.5 135 49.6
Hund16927 Selenicereus undatus HOM05D006065 ORTHO05D007672 3.1e-23 112.5 135 48.1
Cc02_g37900 Coffea canephora HOM05D006065 ORTHO05D007672 4.0e-23 112.1 125 52.8
Phvul.008G067900 Phaseolus vulgaris HOM05D006065 ORTHO05D007672 5.2e-23 111.7 133 48.9
TPR.G37820 Trifolium pratense HOM05D006065 ORTHO05D007672 1.2e-22 110.5 136 47.8
AT4G00525 Arabidopsis thaliana HOM05D006065 ORTHO05D007672 1.5e-22 110.2 133 49.6
Aa31LG5G450 Aethionema arabicum HOM05D006065 ORTHO05D007672 2.0e-22 109.8 126 45.2
MSTRG.4858 Avicennia marina HOM05D006065 ORTHO05D007672 2.6e-22 109.4 143 43.4
Sp6g00560 Schrenkiella parvula HOM05D006065 ORTHO05D007672 2.6e-22 109.4 133 48.9
RcHm_v2.0_Chr1g0355101 Rosa chinensis HOM05D006065 ORTHO05D007672 3.4e-22 109.0 135 46.7
Sc01g0003370 Simmondsia chinensis HOM05D006065 ORTHO05D007672 9.9e-22 107.5 134 44.0
SGA_v2.0_scaffold11G05664 Striga asiatica HOM05D006065 ORTHO05D007672 2.2e-21 106.3 141 43.3
arahy.Tifrunner.gnm1.ann1.WJC6IK Arachis hypogaea HOM05D006065 ORTHO05D007672 3.8e-21 105.5 168 40.5
Sopen01g038320 Solanum pennellii HOM05D006065 ORTHO05D007672 4.9e-21 105.1 130 48.5
unitig_8.g3395 Utricularia gibba HOM05D006065 ORTHO05D007672 6.4e-21 104.8 138 46.4
Aqoxy7G00322 Aquilegia oxysepala HOM05D006065 ORTHO05D007672 1.4e-20 103.6 122 44.3
Thhalv10029047m.g Eutrema salsugineum HOM05D006065 ORTHO05D007672 1.4e-20 103.6 133 43.6
SalBow3G2602 Salvia bowleyana HOM05D006065 ORTHO05D007672 1.4e-20 103.6 131 45.0
PGSC0003DMG400000036 Solanum tuberosum HOM05D006065 ORTHO05D007672 1.9e-20 103.2 138 44.9
Sed0021596 Sechium edule HOM05D006065 ORTHO05D007672 7.1e-20 101.3 140 45.7
Psat3g110920 Pisum sativum HOM05D006065 ORTHO05D007672 2.7e-19 99.4 131 46.6
Rhsim07G0016100 Rhododendron simsii HOM05D006065 ORTHO05D007672 2.7e-19 99.4 217 35.9
MSTRG.28221 Avicennia marina HOM05D006065 ORTHO05D007672 3.5e-19 99.0 165 35.2
PSO832G3783 Papaver somniferum HOM05D006065 ORTHO05D007672 3.5e-19 99.0 139 43.2
Peaxi162Scf00020g00240 Petunia axillaris HOM05D006065 ORTHO05D007672 3.5e-19 99.0 124 46.8
PGSC0003DMG400021646 Solanum tuberosum HOM05D006065 ORTHO05D007672 4.6e-19 98.6 116 50.9
A03p32140 Brassica napus HOM05D006065 ORTHO05D007672 6.0e-19 98.2 136 43.4
FAN10G0270 Fragaria x ananassa HOM05D006065 ORTHO05D007672 6.0e-19 98.2 138 44.9
FAN03G2883 Fragaria x ananassa HOM05D006065 ORTHO05D007672 7.8e-19 97.8 140 45.0
Solyc05g049940.3 Solanum lycopersicum HOM05D006065 ORTHO05D007672 7.8e-19 97.8 115 50.4
FAN01G0390 Fragaria x ananassa HOM05D006065 ORTHO05D007672 1.0e-18 97.4 138 44.9
BraA03t12384Z Brassica rapa HOM05D006065 ORTHO05D007672 1.3e-18 97.1 136 43.4
Sopen05g028300 Solanum pennellii HOM05D006065 ORTHO05D007672 1.3e-18 97.1 115 50.4
FAN06G3027 Fragaria x ananassa HOM05D006065 ORTHO05D007672 1.7e-18 96.7 131 44.3
Ah.05g180670 Amaranthus hybridus HOM05D006065 ORTHO05D007672 2.3e-18 96.3 125 45.6
FAN06G3847 Fragaria x ananassa HOM05D006065 ORTHO05D007672 2.3e-18 96.3 131 44.3
BcaC01g06870 Brassica carinata HOM05D006065 ORTHO05D007672 3.9e-18 95.5 136 44.1
BcaNung05355 Brassica carinata HOM05D006065 ORTHO05D007672 3.9e-18 95.5 136 44.1
BolC3t16187H Brassica oleracea HOM05D006065 ORTHO05D007672 3.9e-18 95.5 136 44.1
Nitab4.5_0001702g0100 Nicotiana tabacum HOM05D006065 ORTHO05D007672 3.9e-18 95.5 119 51.3
PSO210G7571 Papaver somniferum HOM05D006065 ORTHO05D007672 3.9e-18 95.5 139 44.6
CAN.G78.55 Capsicum annuum HOM05D006065 ORTHO05D007672 5.1e-18 95.1 134 44.8
FvH4_7g14190 Fragaria vesca HOM05D006065 ORTHO05D007672 1.1e-17 94.0 140 43.6
EL10Ac1g00426 Beta vulgaris HOM05D006065 ORTHO05D007672 2.5e-17 92.8 107 47.7
Carub.0006s3674 Capsella rubella HOM05D006065 ORTHO05D007672 3.3e-17 92.4 132 43.9
SGA_v2.0_scaffold43G16421 Striga asiatica HOM05D006065 ORTHO05D007672 4.3e-17 92.0 138 40.6
AL6G52950 Arabidopsis lyrata HOM05D006065 ORTHO05D007672 7.3e-17 91.3 132 43.2
MD07G1138600 Malus domestica HOM05D006065 ORTHO05D007672 1.3e-16 90.5 112 50.0
Nitab4.5_0008002g0050 Nicotiana tabacum HOM05D006065 ORTHO05D007672 2.1e-16 89.7 124 44.4
Oeu020560.2 Olea europaea HOM05D006065 ORTHO05D007672 1.4e-15 87.0 204 35.8
Eucgr.D02286 Eucalyptus grandis HOM05D006065 ORTHO05D007672 2.6e-14 82.8 118 43.2
Nitab4.5_0005277g0010 Nicotiana tabacum HOM05D006065 ORTHO05D007672 2.9e-13 79.3 124 40.3
CDE06G0574 Ceratophyllum demersum HOM05D006065 ORTHO05D007672 4.9e-13 78.6 130 37.7
HPP92_008504 Vanilla planifolia HOM05D006065 ORTHO05D007672 6.4e-13 78.2 137 37.2
Nn1g01520 Nelumbo nucifera HOM05D006065 ORTHO05D007672 9.3e-12 74.3 151 39.1
SEGI_06767 Sequoiadendron giganteum HOM05D006065 ORTHO05D007672 1.6e-11 73.6 153 34.0
Potri.002G159100 Populus trichocarpa HOM05D006065 ORTHO05D007672 3.5e-11 72.4 54 66.7
TAR375G0974 Trochodendron aralioides HOM05D006065 ORTHO05D007672 3.5e-11 72.4 87 47.1
AL1G10640 Arabidopsis lyrata HOM05D006065 ORTHO05D007672 1.3e-10 70.5 137 35.0
AUR62022552 Chenopodium quinoa HOM05D006065 ORTHO05D007672 1.7e-10 70.1 88 45.5
CARHR248680 Cardamine hirsuta HOM05D006065 ORTHO05D007672 5.1e-10 68.6 134 34.3
AUR62004346 Chenopodium quinoa HOM05D006065 ORTHO05D007672 5.1e-10 68.6 90 46.7
AT1G01715 Arabidopsis thaliana HOM05D006065 ORTHO05D007672 6.6e-10 68.2 131 33.6
Os04g0558500 Oryza sativa ssp. japonica HOM05D006065 ORTHO05D007672 1.1e-09 67.4 125 32.8
CSS0003041 Camellia sinensis var. sinensis HOM05D006065 ORTHO05D007672 7.3e-09 64.7 182 29.7
Solyc01g094510.2 Solanum lycopersicum HOM05D006065 ORTHO05D007672 2.4e-07 59.7 104 40.4
MD01G1057900 Malus domestica HOM05D006065 ORTHO05D007672 5.8e-06 55.1 65 53.8
CDE02G4271 Ceratophyllum demersum HOM05D000667 ORTHO05D009057 7.6e-06 54.7 59 44.1


User provided reference genes

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