Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 1.3e-97 359.8 185 100.0
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 6.2e-60 234.6 175 70.3
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 1.4e-59 233.4 174 69.5
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 2.4e-59 232.6 188 67.6
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 6.5e-57 224.6 189 61.9
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 8.4e-57 224.2 176 68.2
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.1e-56 223.8 178 66.3
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 1.4e-56 223.4 180 63.9
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 2.5e-56 222.6 173 67.6
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 2.5e-56 222.6 177 66.7
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 3.2e-56 222.2 178 65.7
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 7.1e-56 221.1 179 65.9
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 9.3e-56 220.7 181 64.6
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 1.6e-55 219.9 170 64.1
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 1.6e-55 219.9 170 64.1
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 3.5e-55 218.8 174 63.2
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 6.0e-55 218.0 178 64.6
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 6.0e-55 218.0 174 64.4
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 1.3e-54 216.9 191 63.4
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.3e-54 216.9 178 63.5
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 3.9e-54 215.3 148 70.3
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 5.1e-54 214.9 177 63.8
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 8.7e-54 214.2 173 62.4
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 1.1e-53 213.8 189 62.4
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 1.5e-53 213.4 176 64.2
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 1.5e-53 213.4 185 64.9
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 5.7e-53 211.5 180 60.0
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 7.4e-53 211.1 181 60.2
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 9.6e-53 210.7 177 63.3
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 1.3e-52 210.3 179 64.2
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 1.6e-52 209.9 168 63.7
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 4.1e-51 205.3 177 64.4
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 4.1e-51 205.3 187 60.4
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 4.1e-51 205.3 187 60.4
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 5.3e-51 204.9 173 61.8
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 6.9e-51 204.5 147 70.7
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 9.0e-51 204.1 180 58.3
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.5e-50 203.4 173 61.3
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 4.5e-50 201.8 178 60.7
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 7.6e-50 201.1 180 58.3
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 7.6e-50 201.1 147 66.7
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 7.6e-50 201.1 144 70.1
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 1.0e-49 200.7 192 59.4
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 2.2e-49 199.5 175 61.1
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 2.9e-49 199.1 185 58.4
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 3.8e-49 198.7 170 60.6
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 2.5e-48 196.1 175 60.6
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 3.2e-48 195.7 139 69.1
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 4.2e-48 195.3 176 57.4
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 4.2e-48 195.3 174 59.2
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 5.5e-48 194.9 172 57.0
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 5.5e-48 194.9 180 57.2
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 7.2e-48 194.5 177 58.8
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 7.2e-48 194.5 172 61.6
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 9.3e-48 194.1 176 57.4
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 9.3e-48 194.1 181 58.0
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 2.1e-47 193.0 175 57.1
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 6.1e-47 191.4 183 56.3
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 6.1e-47 191.4 183 56.3
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 7.9e-47 191.0 183 56.3
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 2.3e-46 189.5 175 57.1
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 1.5e-45 186.8 169 61.5
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 1.5e-45 186.8 169 61.5
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 1.9e-45 186.4 178 54.5
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 3.3e-45 185.7 183 56.8
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 3.3e-45 185.7 143 63.6
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 4.3e-45 185.3 178 56.7
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 1.6e-44 183.3 181 56.4
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 2.8e-44 182.6 179 55.3
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 3.7e-44 182.2 156 59.6
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 8.2e-44 181.0 184 55.4
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 1.4e-43 180.3 182 55.5
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 4.1e-43 178.7 140 65.0
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 5.3e-43 178.3 205 51.2
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 2.9e-41 172.6 139 64.0
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 3.8e-41 172.2 176 53.4
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 5.0e-41 171.8 174 52.3
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 5.5e-40 168.3 148 60.1
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 1.4e-38 163.7 120 68.3
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 1.1e-37 160.6 133 60.9
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 9.7e-37 157.5 125 64.0
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 1.5e-34 150.2 121 61.2
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 1.4e-32 143.7 118 56.8
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 7.9e-31 137.9 111 64.9
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 1.4e-30 137.1 166 48.2
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 5.2e-30 135.2 130 58.5
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 1.1e-29 134.0 110 60.0
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 5.7e-29 131.7 110 59.1
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 1.2e-26 124.0 87 67.8
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 2.0e-26 123.2 142 45.1
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 7.7e-26 121.3 119 55.5
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 1.0e-22 110.9 105 52.4
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 3.3e-21 105.9 69 73.9
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 4.8e-20 102.1 83 60.2
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 1.8e-19 100.1 97 51.5
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 5.3e-19 98.6 125 47.2
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 2.1e-15 86.7 167 36.5
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 4.0e-14 82.4 65 60.0
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 1.3e-12 77.4 110 39.1
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 8.3e-12 74.7 128 37.5
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 8.3e-12 74.7 124 37.1


User provided reference genes

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