Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10022441m.g Citrus clementina HOM05D004525 ORTHO05D005295 5.5e-96 354.4 187 100.0
Thecc.03G220900 Theobroma cacao HOM05D004525 ORTHO05D005295 7.7e-82 307.4 182 89.0
Atru.chr9.1879 Acer truncatum HOM05D004525 ORTHO05D005295 8.5e-81 303.9 177 89.8
Duzib205G1187 Durio zibethinus HOM05D004525 ORTHO05D005295 1.1e-80 303.5 178 88.8
Duzib068G1021 Durio zibethinus HOM05D004525 ORTHO05D005295 4.2e-80 301.6 182 86.8
Cpa.g.sc27.182 Carica papaya HOM05D004525 ORTHO05D005295 1.2e-79 300.1 183 86.3
Gohir.A12G240200 Gossypium hirsutum HOM05D004525 ORTHO05D005295 2.3e-78 295.8 182 84.6
Potri.001G083801 Populus trichocarpa HOM05D004525 ORTHO05D005295 3.0e-78 295.4 182 85.7
QL12p036922 Quercus lobata HOM05D004525 ORTHO05D005295 5.1e-78 294.7 183 83.6
QL02p027997 Quercus lobata HOM05D004525 ORTHO05D005295 8.8e-78 293.9 183 83.1
Gorai.008G258800 Gossypium raimondii HOM05D004525 ORTHO05D005295 3.3e-77 292.0 182 84.1
CiPaw.11G112000 Carya illinoinensis HOM05D004525 ORTHO05D005295 5.7e-77 291.2 178 86.5
COL.COLO4_10799 Corchorus olitorius HOM05D004525 ORTHO05D005295 5.7e-77 291.2 180 85.0
Gohir.D12G241500 Gossypium hirsutum HOM05D004525 ORTHO05D005295 9.7e-77 290.4 182 83.5
Sabra01G0060700 Salix brachista HOM05D004525 ORTHO05D005295 1.7e-76 289.7 175 85.7
Cfa006748 Carpinus fangiana HOM05D004525 ORTHO05D005295 2.2e-76 289.3 171 87.1
Cfa011920 Carpinus fangiana HOM05D004525 ORTHO05D005295 2.2e-76 289.3 171 86.0
MD06G1119500 Malus domestica HOM05D004525 ORTHO05D005295 2.8e-76 288.9 182 83.5
Dinv38179 Davidia involucrata HOM05D004525 ORTHO05D005295 8.2e-76 287.3 174 86.2
Manes.09G101000 Manihot esculenta HOM05D004525 ORTHO05D005295 1.1e-75 287.0 188 81.4
Potri.003G146900 Populus trichocarpa HOM05D004525 ORTHO05D005295 1.4e-75 286.6 185 82.7
FvH4_4g11450 Fragaria vesca HOM05D004525 ORTHO05D005295 2.4e-75 285.8 182 81.3
Haze_04010 Corylus avellana HOM05D004525 ORTHO05D005295 3.1e-75 285.4 171 86.0
Sabra03G0106900 Salix brachista HOM05D004525 ORTHO05D005295 4.1e-75 285.0 185 81.6
FAN07G0034 Fragaria x ananassa HOM05D004525 ORTHO05D005295 5.3e-75 284.6 182 80.8
Prupe.2G307200 Prunus persica HOM05D004525 ORTHO05D005295 9.1e-75 283.9 186 80.6
RcHm_v2.0_Chr1g0332661 Rosa chinensis HOM05D004525 ORTHO05D005295 1.5e-74 283.1 182 81.9
THA.LOC104809303 Tarenaya hassleriana HOM05D004525 ORTHO05D005295 1.5e-74 283.1 178 82.0
Lsat_1_v5_gn_3_14420 Lactuca sativa HOM05D004525 ORTHO05D005295 3.4e-74 282.0 190 76.8
GSVIVG01019654001 Vitis vinifera HOM05D004525 ORTHO05D005295 3.4e-74 282.0 186 79.0
MD14G1136300 Malus domestica HOM05D004525 ORTHO05D005295 4.5e-74 281.6 182 81.9
RcHm_v2.0_Chr6g0273561 Rosa chinensis HOM05D004525 ORTHO05D005295 4.5e-74 281.6 182 81.3
PGR031G2275 Punica granatum HOM05D004525 ORTHO05D005295 6.5e-73 277.7 181 78.5
AL1G39060 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 8.5e-73 277.3 181 79.0
Actinidia22207 Actinidia chinensis HOM05D004525 ORTHO05D005295 2.5e-72 275.8 182 77.5
CiPaw.12G077100 Carya illinoinensis HOM05D004525 ORTHO05D005295 2.5e-72 275.8 179 80.4
HanXRQChr17g0534221 Helianthus annuus HOM05D004525 ORTHO05D005295 2.5e-72 275.8 186 77.4
FAN22G0758 Fragaria x ananassa HOM05D004525 ORTHO05D005295 3.2e-72 275.4 181 79.6
Prupe.5G130000 Prunus persica HOM05D004525 ORTHO05D005295 5.5e-72 274.6 189 77.2
ClCG10G000810 Citrullus lanatus HOM05D004525 ORTHO05D005295 1.2e-71 273.5 171 84.8
Thhalv10008848m.g Eutrema salsugineum HOM05D004525 ORTHO05D005295 1.6e-71 273.1 184 78.8
TWI56G0194 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 2.1e-71 272.7 191 76.4
TAR629G2664 Trochodendron aralioides HOM05D004525 ORTHO05D005295 2.1e-71 272.7 180 79.4
Nn3g18812 Nelumbo nucifera HOM05D004525 ORTHO05D005295 2.7e-71 272.3 178 79.8
Cc08_g16770 Coffea canephora HOM05D004525 ORTHO05D005295 6.1e-71 271.2 166 83.7
CsaV3_3G000870 Cucumis sativus L. HOM05D004525 ORTHO05D005295 6.1e-71 271.2 173 83.8
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 7.9e-71 270.8 181 78.5
Ca_02991_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 1.0e-70 270.4 178 78.1
Hma1.2p1_0456F.1_g156630 Hydrangea macrophylla HOM05D004525 ORTHO05D005295 1.4e-70 270.0 155 87.7
BcaC06g35131 Brassica carinata HOM05D004525 ORTHO05D005295 1.8e-70 269.6 181 78.5
Sed0024458 Sechium edule HOM05D004525 ORTHO05D005295 1.8e-70 269.6 179 78.8
AT1G26665 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 2.3e-70 269.2 178 78.1
Ca_17957_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 2.3e-70 269.2 178 77.5
Eucgr.C04229 Eucalyptus grandis HOM05D004525 ORTHO05D005295 2.3e-70 269.2 175 77.7
SGA_v2.0_scaffold14G07039 Striga asiatica HOM05D004525 ORTHO05D005295 2.3e-70 269.2 187 74.9
SGA_v2.0_scaffold36G14274 Striga asiatica HOM05D004525 ORTHO05D005295 2.3e-70 269.2 187 74.9
TWI36G0523 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 2.3e-70 269.2 171 81.3
CSS0029651 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 3.0e-70 268.9 181 76.2
MBI04_g25309_MAGBIO Magnolia biondii HOM05D004525 ORTHO05D005295 3.0e-70 268.9 157 85.4
ECA246G3328 Erigeron canadensis HOM05D004525 ORTHO05D005295 3.9e-70 268.5 158 84.8
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 5.1e-70 268.1 181 77.9
Nitab4.5_0001367g0040 Nicotiana tabacum HOM05D004525 ORTHO05D005295 8.8e-70 267.3 188 75.0
CSS0036474 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 1.1e-69 266.9 181 76.2
BcaB03g14082 Brassica carinata HOM05D004525 ORTHO05D005295 1.5e-69 266.5 183 77.6
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 2.0e-69 266.2 177 79.1
CSS0049671 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 3.3e-69 265.4 181 75.7
Nitab4.5_0012632g0010 Nicotiana tabacum HOM05D004525 ORTHO05D005295 7.4e-69 264.2 188 74.5
Phvul.003G069600 Phaseolus vulgaris HOM05D004525 ORTHO05D005295 7.4e-69 264.2 183 75.4
Sp1g22150 Schrenkiella parvula HOM05D004525 ORTHO05D005295 9.7e-69 263.8 182 75.3
Glyma.08G296500 Glycine max HOM05D004525 ORTHO05D005295 1.7e-68 263.1 183 74.3
Solyc08g065160.3 Solanum lycopersicum HOM05D004525 ORTHO05D005295 2.2e-68 262.7 189 72.5
Sopen08g018760 Solanum pennellii HOM05D004525 ORTHO05D005295 2.2e-68 262.7 189 72.5
PGSC0003DMG400029951 Solanum tuberosum HOM05D004525 ORTHO05D005295 2.2e-68 262.7 189 72.5
EL10Ac5g12425 Beta vulgaris HOM05D004525 ORTHO05D005295 2.8e-68 262.3 194 71.6
VMungo0251G0643 Vigna mungo HOM05D004525 ORTHO05D005295 2.8e-68 262.3 184 75.5
Haze_09177 Corylus avellana HOM05D004525 ORTHO05D005295 6.3e-68 261.2 158 83.5
SalBow6G4763 Salvia bowleyana HOM05D004525 ORTHO05D005295 1.8e-67 259.6 162 79.6
Aa31LG9G260 Aethionema arabicum HOM05D004525 ORTHO05D005295 2.4e-67 259.2 200 70.5
DCAR_011870 Daucus carota HOM05D004525 ORTHO05D005295 2.4e-67 259.2 178 75.8
Migut.E00628 Erythranthe guttata HOM05D004525 ORTHO05D005295 3.1e-67 258.8 185 70.8
PSO017G1681 Papaver somniferum HOM05D004525 ORTHO05D005295 9.1e-67 257.3 174 75.3
DCAR_006547 Daucus carota HOM05D004525 ORTHO05D005295 1.2e-66 256.9 162 80.2
Rhsim07G0078000 Rhododendron simsii HOM05D004525 ORTHO05D005295 1.2e-66 256.9 182 73.6
CARHR212640 Cardamine hirsuta HOM05D004525 ORTHO05D005295 1.5e-66 256.5 167 78.4
Sc01g0010720 Simmondsia chinensis HOM05D004525 ORTHO05D005295 2.0e-66 256.1 201 69.2
PSO478G2085 Papaver somniferum HOM05D004525 ORTHO05D005295 5.9e-66 254.6 174 74.7
CARHR025300 Cardamine hirsuta HOM05D004525 ORTHO05D005295 1.0e-65 253.8 188 72.9
Aqoxy3G00526 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 1.7e-65 253.1 176 75.0
Aqoxy5G04330 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 1.7e-65 253.1 176 75.0
Carub.0001s2436 Capsella rubella HOM05D004525 ORTHO05D005295 1.7e-65 253.1 185 73.0
Lalb_Chr12g0205381 Lupinus albus HOM05D004525 ORTHO05D005295 1.7e-65 253.1 178 73.0
Lalb_Chr13g0294931 Lupinus albus HOM05D004525 ORTHO05D005295 2.2e-65 252.7 178 73.0
Hund11348 Selenicereus undatus HOM05D004525 ORTHO05D005295 2.2e-65 252.7 157 80.3
unitig_744.g24303 Utricularia gibba HOM05D004525 ORTHO05D005295 2.9e-65 252.3 185 70.3
MSTRG.12201 Avicennia marina HOM05D004525 ORTHO05D005295 3.8e-65 251.9 182 70.3
CANSAT56G2042 Cannabis sativa HOM05D004525 ORTHO05D005295 3.8e-65 251.9 201 69.7
Glyma.18G125700 Glycine max HOM05D004525 ORTHO05D005295 5.0e-65 251.5 183 72.7
TPR.G15828 Trifolium pratense HOM05D004525 ORTHO05D005295 5.0e-65 251.5 180 73.3
vmacro11499 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 5.0e-65 251.5 171 76.6
MSTRG.24865 Avicennia marina HOM05D004525 ORTHO05D005295 6.5e-65 251.1 192 68.8
Zm00001eb103320 Zea mays HOM05D004525 ORTHO05D005295 1.1e-64 250.4 180 75.0
Medtr8g085570 Medicago truncatula HOM05D004525 ORTHO05D005295 1.9e-64 249.6 180 71.1
Zm00001eb319380 Zea mays HOM05D004525 ORTHO05D005295 3.2e-64 248.8 176 76.1
AL7G47302 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 9.4e-64 247.3 169 79.9
Psat7g073160 Pisum sativum HOM05D004525 ORTHO05D005295 9.4e-64 247.3 180 71.7
Lj8A200T57 Lonicera japonica HOM05D004525 ORTHO05D005295 1.6e-63 246.5 153 81.7
AUR62007057 Chenopodium quinoa HOM05D004525 ORTHO05D005295 2.1e-63 246.1 177 72.3
HPP92_025871 Vanilla planifolia HOM05D004525 ORTHO05D005295 2.7e-63 245.7 183 70.5
AT5G41910 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 8.0e-63 244.2 175 75.4
Atru.chr3.1913 Acer truncatum HOM05D004525 ORTHO05D005295 1.0e-62 243.8 163 79.1
Ah.12g053230 Amaranthus hybridus HOM05D004525 ORTHO05D005295 1.8e-62 243.0 159 76.7
Os09g0528300 Oryza sativa ssp. japonica HOM05D004525 ORTHO05D005295 2.3e-62 242.7 158 79.7
ATR0620G086 Amborella trichopoda HOM05D004525 ORTHO05D005295 8.8e-62 240.7 172 70.9
Lj4g0018067 Lotus japonicus HOM05D004525 ORTHO05D005295 2.2e-60 236.1 185 67.0
TPR.G11962 Trifolium pratense HOM05D004525 ORTHO05D005295 4.8e-60 235.0 180 70.0
vmacro13851 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 1.1e-59 233.8 182 68.7
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 2.4e-59 232.6 157 77.1
Psat7g073280 Pisum sativum HOM05D004525 ORTHO05D005295 4.1e-59 231.9 158 75.3
CDE07G1557 Ceratophyllum demersum HOM05D004525 ORTHO05D005295 7.0e-59 231.1 176 69.3
FAN17G2704 Fragaria x ananassa HOM05D004525 ORTHO05D005295 1.2e-58 230.3 185 71.4
unitig_21.g20890 Utricularia gibba HOM05D004525 ORTHO05D005295 1.6e-58 229.9 186 65.6
Lj4g0019040 Lotus japonicus HOM05D004525 ORTHO05D005295 1.7e-57 226.5 160 73.8
BraA09t39504Z Brassica rapa HOM05D004525 ORTHO05D005295 6.5e-57 224.6 169 71.0
Oeu022035.1 Olea europaea HOM05D004525 ORTHO05D005295 3.6e-55 218.8 257 53.7
FAN08G2166 Fragaria x ananassa HOM05D000319 ORTHO05D035382 2.3e-54 216.1 148 74.3
Peaxi162Scf01444g00013 Petunia axillaris HOM05D004525 ORTHO05D005295 4.0e-54 215.3 181 66.9
arahy.Tifrunner.gnm1.ann1.0LH6ZS Arachis hypogaea HOM05D004525 ORTHO05D005295 1.2e-50 203.8 183 61.7
arahy.Tifrunner.gnm1.ann1.DJD4V2 Arachis hypogaea HOM05D004525 ORTHO05D005295 3.5e-50 202.2 183 60.7
C05p24330 Brassica napus HOM05D004525 ORTHO05D005295 5.9e-50 201.4 150 73.3
Cfa007058 Carpinus fangiana HOM05D004525 ORTHO05D005295 1.3e-49 200.3 121 87.6
Psat7g074000 Pisum sativum HOM05D004525 ORTHO05D005295 5.0e-49 198.4 167 64.1
Psat7g072880 Pisum sativum HOM05D004525 ORTHO05D005295 1.2e-47 193.7 153 64.1
MELO3C013773.2 Cucumis melo HOM05D004525 ORTHO05D005295 6.1e-47 191.4 216 55.6
Nitab4.5_0017193g0030 Nicotiana tabacum HOM05D004525 ORTHO05D005295 3.7e-44 182.2 168 62.5
AUR62019920 Chenopodium quinoa HOM05D004525 ORTHO05D005295 4.9e-44 181.8 110 79.1
FvH4_5g19692 Fragaria vesca HOM05D004525 ORTHO05D005295 1.4e-43 180.3 153 65.4
Peaxi162Scf00640g00032 Petunia axillaris HOM05D004525 ORTHO05D005295 3.1e-43 179.1 132 68.9
Actinidia27285 Actinidia chinensis HOM05D004525 ORTHO05D005295 2.9e-41 172.6 178 55.6
TAR375G0036 Trochodendron aralioides HOM05D004525 ORTHO05D005295 5.0e-41 171.8 104 78.8
Mapoly0151s0039 Marchantia polymorpha HOM05D004525 ORTHO05D005295 1.4e-38 163.7 156 52.6
Pp3c11_16910 Physcomitrium patens HOM05D004525 ORTHO05D005295 5.2e-38 161.8 144 54.2
PGSC0003DMG400039131 Solanum tuberosum HOM05D004525 ORTHO05D005295 5.7e-37 158.3 129 62.8
PGSC0003DMG400040735 Solanum tuberosum HOM05D004525 ORTHO05D005295 4.9e-36 155.2 130 66.2
PGSC0003DMG400043501 Solanum tuberosum HOM05D004525 ORTHO05D005295 8.3e-36 154.5 130 63.8
PGSC0003DMG400008601 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.8e-35 153.3 130 63.8
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 9.2e-35 151.0 91 79.1
PGSC0003DMG400017120 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.6e-34 150.2 130 64.6
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 1.7e-33 146.7 121 64.5
CAN.G6.3 Capsicum annuum HOM05D004525 ORTHO05D005295 6.6e-33 144.8 82 84.1
AagrBONN_evm.TU.Sc2ySwM_117.1849 Anthoceros agrestis HOM05D004525 ORTHO05D005295 8.6e-33 144.4 144 48.6
SMO301G0053 Selaginella moellendorffii HOM05D004525 ORTHO05D005295 4.3e-32 142.1 154 49.4
AagrBONN_evm.TU.Sc2ySwM_368.381 Anthoceros agrestis HOM05D004525 ORTHO05D005295 5.6e-32 141.7 172 43.0
SEGI_32557 Sequoiadendron giganteum HOM05D004525 ORTHO05D005295 1.8e-30 136.7 136 52.2
Nitab4.5_0002724g0080 Nicotiana tabacum HOM05D004525 ORTHO05D005295 6.0e-26 121.7 111 62.2
RcHm_v2.0_Chr7g0187021 Rosa chinensis HOM05D004525 ORTHO05D005295 1.9e-24 116.7 179 45.3
CAN.G1631.10 Capsicum annuum HOM05D004525 ORTHO05D005295 6.4e-20 101.7 86 67.4
RcHm_v2.0_Chr5g0055281 Rosa chinensis HOM05D004525 ORTHO05D005295 1.6e-15 87.0 58 70.7
BcaB05g21931 Brassica carinata HOM05D004525 ORTHO05D005295 4.9e-12 75.5 68 66.2
SGA_v2.0_scaffold104G30259 Striga asiatica HOM05D004525 ORTHO05D005295 2.1e-10 70.1 161 38.5
TAR374G0495 Trochodendron aralioides HOM05D004525 ORTHO05D005295 7.8e-10 68.2 105 45.7
Cre12.g556450 Chlamydomonas reinhardtii HOM05D004525 ORTHO05D005295 4.0e-06 55.8 155 27.7


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