Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 1.7e-79 299.7 198 100.0
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 5.0e-39 165.2 192 55.7
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 6.3e-34 148.3 194 52.1
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 3.5e-32 142.5 161 54.0
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 7.7e-32 141.4 198 48.0
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 7.7e-32 141.4 161 65.2
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 2.9e-31 139.4 164 54.9
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 2.9e-31 139.4 162 66.7
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 3.8e-31 139.0 163 51.5
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 1.5e-30 137.1 162 54.9
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 1.5e-30 137.1 156 53.8
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 3.2e-30 136.0 163 54.6
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 3.2e-30 136.0 162 54.3
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 3.2e-30 136.0 162 52.5
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 4.2e-30 135.6 162 55.6
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 4.2e-30 135.6 162 51.9
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 4.2e-30 135.6 160 51.9
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 5.5e-30 135.2 165 52.1
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 5.5e-30 135.2 155 57.4
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 2.7e-29 132.9 164 50.6
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 3.6e-29 132.5 165 50.3
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 6.1e-29 131.7 161 50.3
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 1.0e-28 131.0 162 50.0
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 1.8e-28 130.2 228 42.5
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 4.0e-28 129.0 191 47.1
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 4.0e-28 129.0 192 44.3
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 6.7e-28 128.3 193 46.6
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 6.7e-28 128.3 162 50.0
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 8.8e-28 127.9 197 45.2
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 8.8e-28 127.9 197 45.2
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 1.1e-27 127.5 163 55.8
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 1.5e-27 127.1 164 51.8
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 1.5e-27 127.1 183 42.6
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 2.0e-27 126.7 162 47.5
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 2.0e-27 126.7 163 51.5
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 2.6e-27 126.3 166 47.6
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 2.6e-27 126.3 162 49.4
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.6e-27 126.3 189 44.4
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 2.6e-27 126.3 158 53.8
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 2.6e-27 126.3 221 41.2
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 3.3e-27 125.9 162 50.0
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 5.7e-27 125.2 161 48.4
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 5.7e-27 125.2 166 47.0
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 5.7e-27 125.2 163 52.1
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 7.5e-27 124.8 174 43.7
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 9.7e-27 124.4 181 49.7
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 9.7e-27 124.4 152 51.3
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 9.7e-27 124.4 199 44.2
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 1.3e-26 124.0 194 51.0
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 2.2e-26 123.2 194 44.3
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 2.8e-26 122.9 201 45.3
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 3.7e-26 122.5 162 48.1
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 4.8e-26 122.1 224 44.2
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 6.3e-26 121.7 234 40.6
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 8.2e-26 121.3 162 48.1
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 8.2e-26 121.3 196 45.4
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.1e-25 120.9 197 45.2
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 1.1e-25 120.9 167 47.9
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 1.8e-25 120.2 161 49.1
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.8e-25 120.2 191 43.5
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 4.1e-25 119.0 165 44.8
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 4.1e-25 119.0 233 40.3
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 4.1e-25 119.0 204 43.1
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 4.1e-25 119.0 133 57.1
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 9.1e-25 117.9 173 46.2
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 9.1e-25 117.9 161 44.7
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 1.6e-24 117.1 160 48.8
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 2.0e-24 116.7 193 40.9
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 2.0e-24 116.7 163 52.1
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 4.5e-24 115.5 191 42.4
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 5.9e-24 115.2 198 42.4
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 1.0e-23 114.4 164 48.8
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 1.7e-23 113.6 168 47.0
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 5.0e-23 112.1 164 46.3
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 1.1e-22 110.9 162 45.7
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 1.5e-22 110.5 168 53.0
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 3.2e-22 109.4 180 43.3
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 2.1e-21 106.7 165 44.8
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 6.1e-21 105.1 116 56.9
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 6.1e-21 105.1 180 43.9
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 6.1e-21 105.1 154 47.4
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 1.4e-20 104.0 186 43.0
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 2.3e-20 103.2 160 45.0
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 6.8e-20 101.7 162 41.4
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 8.8e-20 101.3 204 39.2
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 1.2e-19 100.9 154 46.8
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 1.2e-19 100.9 164 45.1
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 1.5e-19 100.5 194 38.1
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 1.5e-19 100.5 194 38.1
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 4.8e-18 95.5 194 37.6
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 1.1e-17 94.4 162 43.8
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 1.1e-17 94.4 200 38.5
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 1.1e-17 94.4 149 46.3
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 2.4e-17 93.2 123 52.8
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 3.1e-17 92.8 194 37.6
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 1.6e-16 90.5 160 43.8
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 2.0e-16 90.1 193 37.3
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 3.5e-16 89.4 194 36.1
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 5.9e-16 88.6 212 33.0
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 5.0e-15 85.5 154 43.5
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 8.5e-15 84.7 155 49.0
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 5.5e-14 82.0 172 39.5
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 9.4e-14 81.3 164 38.4
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 1.2e-13 80.9 151 45.7
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 1.0e-12 77.8 115 47.8
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 1.8e-12 77.0 146 54.1
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 2.3e-12 76.6 146 53.4
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 4.4e-11 72.4 156 36.5
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 1.3e-10 70.9 66 60.6
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 1.3e-10 70.9 146 39.0
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 2.8e-10 69.7 56 66.1
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 3.7e-10 69.3 117 41.0
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 9.2e-09 64.7 123 40.7
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 1.7e-07 60.5 63 60.3
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 2.9e-07 59.7 168 36.9
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 3.3e-06 56.2 49 67.3


User provided reference genes

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