Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 5.5e-130 467.6 233 100.0
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 5.6e-98 361.3 233 79.4
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 4.7e-97 358.2 232 78.9
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 6.2e-97 357.8 232 79.3
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 6.2e-97 357.8 232 78.9
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 2.3e-96 355.9 232 77.2
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 5.2e-96 354.8 232 78.4
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 8.9e-96 354.0 232 76.7
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 8.9e-96 354.0 230 78.7
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 2.6e-95 352.4 228 78.9
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 9.8e-95 350.5 232 76.7
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 3.7e-94 348.6 232 75.9
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 4.1e-93 345.1 233 74.2
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 7.0e-93 344.4 234 74.4
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 6.6e-91 337.8 233 73.4
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 1.9e-90 336.3 229 73.8
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 2.5e-90 335.9 233 73.0
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.3e-90 335.5 238 71.8
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 3.3e-90 335.5 234 72.2
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 3.3e-90 335.5 229 74.2
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 4.3e-90 335.1 233 73.8
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 4.3e-90 335.1 231 72.7
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 5.6e-90 334.7 232 74.1
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 5.6e-90 334.7 232 74.1
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 9.5e-90 334.0 233 72.1
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 9.5e-90 334.0 232 72.8
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 1.2e-89 333.6 231 74.0
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 1.2e-89 333.6 232 72.0
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 1.2e-89 333.6 232 73.3
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.6e-89 333.2 232 71.1
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 1.6e-89 333.2 229 73.4
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.1e-89 332.8 232 74.6
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 2.8e-89 332.4 236 71.2
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 8.1e-89 330.9 233 71.2
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 1.1e-88 330.5 229 71.6
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.4e-88 330.1 232 71.6
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 1.8e-88 329.7 233 74.2
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 2.3e-88 329.3 230 72.2
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 2.3e-88 329.3 236 72.5
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 3.1e-88 328.9 230 73.0
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 6.8e-88 327.8 232 72.8
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 8.9e-88 327.4 228 72.4
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 2.0e-87 326.2 230 71.7
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 2.0e-87 326.2 231 71.9
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 2.0e-87 326.2 231 71.9
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 2.0e-87 326.2 230 74.8
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 3.4e-87 325.5 230 73.9
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 3.4e-87 325.5 229 72.1
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 4.4e-87 325.1 233 71.2
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 4.4e-87 325.1 230 72.6
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 7.5e-87 324.3 229 71.6
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 9.8e-87 323.9 231 71.9
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 9.8e-87 323.9 233 70.0
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 1.3e-86 323.6 238 69.7
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 1.7e-86 323.2 232 70.7
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 2.2e-86 322.8 225 72.4
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 2.2e-86 322.8 233 69.5
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 2.9e-86 322.4 232 72.4
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 3.7e-86 322.0 233 70.8
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 4.9e-86 321.6 233 71.7
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 6.4e-86 321.2 232 69.8
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 1.6e-84 316.6 234 69.7
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.7e-84 315.8 239 69.0
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 3.5e-84 315.5 231 69.7
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 3.5e-84 315.5 226 72.6
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 3.5e-84 315.5 232 68.5
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 6.0e-84 314.7 231 69.7
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 6.0e-84 314.7 239 69.5
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 6.0e-84 314.7 255 66.3
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 7.8e-84 314.3 231 70.6
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 1.3e-83 313.5 229 71.6
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 1.7e-83 313.2 239 68.6
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 3.0e-83 312.4 233 67.4
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 3.0e-83 312.4 273 62.6
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 6.6e-83 311.2 183 80.3
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 4.3e-82 308.5 277 60.6
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 7.3e-82 307.8 227 67.8
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 7.3e-82 307.8 225 69.3
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 2.1e-81 306.2 175 81.7
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 1.1e-80 303.9 206 72.3
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 8.9e-80 300.8 240 65.8
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 3.4e-79 298.9 229 64.2
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.3e-78 297.0 300 55.7
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 1.3e-75 287.0 204 72.5
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 1.3e-75 287.0 291 56.4
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 6.6e-75 284.6 219 64.8
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 1.5e-74 283.5 228 63.6
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 4.7e-73 278.5 233 60.9
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 6.9e-72 274.6 193 75.1
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 8.9e-72 274.2 160 80.6
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 3.4e-71 272.3 232 62.9
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 1.9e-69 266.5 229 63.3
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 1.9e-69 266.5 246 58.9
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 1.2e-68 263.8 246 57.7
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 2.7e-68 262.7 233 59.2
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 2.3e-67 259.6 219 58.9
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 1.1e-66 257.3 385 43.1
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 1.8e-64 250.0 258 51.6
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.0e-63 246.5 192 65.6
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 6.7e-59 231.5 231 54.1
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 6.2e-57 224.9 195 55.9
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 6.7e-51 204.9 188 61.7
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.6e-49 200.3 158 70.3
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 3.4e-47 192.6 158 68.4
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 4.9e-46 188.7 236 45.3
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 1.1e-40 171.0 134 66.4
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 1.1e-40 171.0 134 66.4
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 1.3e-38 164.1 166 55.4
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 8.7e-35 151.4 226 38.9
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 1.3e-33 147.5 218 37.2
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 5.0e-30 135.6 142 54.9
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 8.5e-30 134.8 149 52.3
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 7.2e-29 131.7 149 51.7
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 5.9e-23 112.1 176 40.9
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 2.7e-20 103.2 108 60.2
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 1.8e-19 100.5 103 55.3
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 1.8e-19 100.5 79 63.3
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 2.3e-19 100.1 54 81.5
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 1.2e-15 87.8 103 49.5
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 8.5e-14 81.6 101 51.5
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.4e-11 74.3 53 64.2
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 1.4e-08 64.3 45 62.2


User provided reference genes

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