Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 8.9e-123 443.7 242 100.0
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 2.7e-95 352.4 241 79.3
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 6.6e-94 347.8 243 77.0
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 1.1e-93 347.1 242 75.2
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 2.8e-92 342.4 243 76.1
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 8.1e-92 340.9 241 75.9
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 1.1e-91 340.5 241 75.9
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 3.1e-91 339.0 243 73.7
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 5.2e-91 338.2 242 77.3
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 6.8e-91 337.8 244 77.9
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 2.6e-90 335.9 242 75.6
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 3.4e-90 335.5 243 74.9
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 2.9e-89 332.4 243 74.5
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 4.9e-89 331.6 240 74.2
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 3.2e-88 328.9 245 75.5
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 3.2e-88 328.9 245 74.3
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 3.2e-88 328.9 242 73.6
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 5.4e-88 328.2 240 73.3
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 7.1e-88 327.8 242 73.6
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 7.1e-88 327.8 242 73.6
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 9.3e-88 327.4 243 74.9
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 9.3e-88 327.4 242 73.1
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 2.7e-87 325.9 244 74.2
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 6.0e-87 324.7 244 71.7
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.3e-86 323.6 242 74.0
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 5.1e-86 321.6 251 71.7
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 2.5e-85 319.3 242 70.7
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 4.3e-85 318.5 240 69.2
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 7.3e-85 317.8 245 72.2
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 1.3e-84 317.0 235 72.8
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 1.3e-84 317.0 241 70.1
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 1.3e-84 317.0 243 72.0
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 2.8e-84 315.8 242 71.1
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 6.2e-84 314.7 220 76.8
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 4.0e-83 312.0 242 70.2
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 6.9e-83 311.2 242 70.7
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 9.0e-83 310.8 242 69.4
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 2.0e-82 309.7 241 68.5
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 2.0e-82 309.7 243 67.9
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 4.4e-82 308.5 242 68.6
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 9.9e-82 307.4 239 69.5
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 3.8e-81 305.4 242 67.8
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 4.9e-81 305.1 242 69.0
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 1.1e-80 303.9 206 77.7
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 1.4e-80 303.5 242 67.8
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 1.4e-80 303.5 242 66.9
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 1.9e-80 303.1 242 67.4
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 2.4e-80 302.8 242 67.8
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 2.4e-80 302.8 242 67.8
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 3.2e-80 302.4 240 67.5
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 3.2e-80 302.4 242 67.8
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 3.2e-80 302.4 242 67.4
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 5.4e-80 301.6 206 76.2
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 7.1e-80 301.2 242 67.4
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 9.3e-80 300.8 226 67.7
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.2e-79 300.4 241 66.4
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 2.1e-79 299.7 242 67.4
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 2.1e-79 299.7 242 69.0
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 2.7e-79 299.3 204 77.9
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 3.5e-79 298.9 226 67.7
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 3.5e-79 298.9 241 66.4
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 4.6e-79 298.5 242 64.9
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 7.9e-79 297.7 242 66.5
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 1.3e-78 297.0 241 65.1
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 2.3e-78 296.2 233 67.8
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 3.0e-78 295.8 225 71.1
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 8.7e-78 294.3 247 66.4
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 8.7e-78 294.3 249 64.7
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 8.7e-78 294.3 233 66.5
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 1.5e-77 293.5 247 66.4
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 1.5e-77 293.5 248 66.5
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.9e-77 293.1 209 71.3
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 2.5e-77 292.7 246 67.1
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 3.3e-77 292.4 252 65.9
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 9.6e-77 290.8 243 65.4
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 9.6e-77 290.8 241 64.7
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 2.1e-76 289.7 209 71.8
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 3.6e-76 288.9 209 71.3
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 4.8e-76 288.5 243 65.0
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 8.1e-76 287.7 209 70.8
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 5.3e-75 285.0 241 63.1
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 6.9e-75 284.6 248 62.5
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 3.4e-74 282.3 241 66.4
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 4.9e-73 278.5 224 64.3
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 4.2e-72 275.4 241 62.2
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 7.1e-72 274.6 236 62.7
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 2.3e-70 269.6 229 60.3
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 3.0e-70 269.2 236 62.7
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 3.0e-70 269.2 223 62.3
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 3.9e-70 268.9 242 62.8
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 1.9e-69 266.5 189 76.2
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 3.3e-69 265.8 233 63.9
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 3.4e-66 255.8 246 58.5
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 1.5e-61 240.4 220 57.3
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 1.6e-60 236.9 212 60.4
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 5.8e-58 228.4 173 72.3
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 1.4e-56 223.8 244 56.1
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 4.2e-56 222.2 225 52.4
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 2.1e-55 219.9 206 56.8
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 4.6e-47 192.2 227 46.7
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 3.1e-43 179.5 154 64.9
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 7.7e-42 174.9 157 65.0
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 5.1e-38 162.2 233 44.2
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 2.0e-37 160.2 118 70.3
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 3.8e-33 146.0 99 80.8
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 4.1e-27 125.9 122 61.5
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 5.3e-27 125.6 222 39.6
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 8.0e-23 111.7 79 73.4
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 1.0e-17 94.7 207 33.3
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 4.9e-12 75.9 210 26.7
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 3.1e-11 73.2 52 73.1
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 5.0e-09 65.9 59 59.3
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 7.3e-08 62.0 46 69.6


User provided reference genes

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