Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10021462m.g Citrus clementina HOM05D004461 ORTHO05D005543 6.4e-176 620.5 292 100.0
Ciclev10018900m.g Citrus clementina HOM05D004461 ORTHO05D005543 4.4e-161 571.2 283 96.1
Dinv33221 Davidia involucrata HOM05D004461 ORTHO05D005543 3.5e-142 508.4 283 84.5
FvH4_1g00530 Fragaria vesca HOM05D004461 ORTHO05D005543 1.0e-141 506.9 283 83.4
Dinv13732 Davidia involucrata HOM05D004461 ORTHO05D005543 3.9e-141 505.0 283 83.7
Prupe.7G266700 Prunus persica HOM05D004461 ORTHO05D005543 3.9e-141 505.0 283 83.0
FAN28G0648 Fragaria x ananassa HOM05D004461 ORTHO05D005543 5.1e-141 504.6 283 83.0
FAN26G3123 Fragaria x ananassa HOM05D004461 ORTHO05D005543 1.1e-140 503.4 283 83.0
EL10Ac3g06109 Beta vulgaris HOM05D004461 ORTHO05D005543 2.5e-140 502.3 287 82.2
Sc25g0002880 Simmondsia chinensis HOM05D004461 ORTHO05D005543 4.3e-140 501.5 287 81.9
RcHm_v2.0_Chr2g0085161 Rosa chinensis HOM05D004461 ORTHO05D005543 5.6e-140 501.1 283 83.0
COL.COLO4_08073 Corchorus olitorius HOM05D004461 ORTHO05D005543 7.4e-140 500.7 283 82.7
Cpa.g.sc343.6 Carica papaya HOM05D004461 ORTHO05D005543 9.6e-140 500.4 283 83.0
Atru.chr4.1475 Acer truncatum HOM05D004461 ORTHO05D005543 6.2e-139 497.7 283 82.7
Actinidia18410 Actinidia chinensis HOM05D004461 ORTHO05D005543 1.4e-138 496.5 283 82.0
BcaC08g45004 Brassica carinata HOM05D004461 ORTHO05D005543 1.8e-138 496.1 283 81.3
BolC6t37801H Brassica oleracea HOM05D004461 ORTHO05D005543 1.8e-138 496.1 283 81.3
Ca_18625_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 2.4e-138 495.7 284 81.0
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 2.4e-138 495.7 284 81.0
Cc03_g14480 Coffea canephora HOM05D004461 ORTHO05D005543 3.1e-138 495.4 283 81.6
Sabra13G0107300 Salix brachista HOM05D004461 ORTHO05D005543 3.1e-138 495.4 283 82.3
C06p26390 Brassica napus HOM05D004461 ORTHO05D005543 4.0e-138 495.0 283 80.9
Manes.05G186753 Manihot esculenta HOM05D004461 ORTHO05D005543 5.3e-138 494.6 283 82.7
Hund22530 Selenicereus undatus HOM05D004461 ORTHO05D005543 5.3e-138 494.6 287 79.8
Duzib212G0381 Durio zibethinus HOM05D004461 ORTHO05D005543 6.9e-138 494.2 283 81.6
Glyma.07G206500 Glycine max HOM05D004461 ORTHO05D005543 9.0e-138 493.8 284 80.6
Potri.013G128500 Populus trichocarpa HOM05D004461 ORTHO05D005543 9.0e-138 493.8 283 82.0
MD15G1148100 Malus domestica HOM05D004461 ORTHO05D005543 1.5e-137 493.0 283 80.9
THA.LOC104802333 Tarenaya hassleriana HOM05D004461 ORTHO05D005543 1.5e-137 493.0 283 80.6
TAR623G0001 Trochodendron aralioides HOM05D004461 ORTHO05D005543 1.5e-137 493.0 283 81.6
Haze_00857 Corylus avellana HOM05D004461 ORTHO05D005543 2.0e-137 492.7 283 81.6
Thecc.04G163000 Theobroma cacao HOM05D004461 ORTHO05D005543 2.0e-137 492.7 283 82.0
VMungo0251G2958 Vigna mungo HOM05D004461 ORTHO05D005543 2.0e-137 492.7 284 81.0
A07p24810 Brassica napus HOM05D004461 ORTHO05D005543 2.6e-137 492.3 283 80.9
Carub.0005s2648 Capsella rubella HOM05D004461 ORTHO05D005543 2.6e-137 492.3 283 80.6
Duzib268G0878 Durio zibethinus HOM05D004461 ORTHO05D005543 2.6e-137 492.3 283 81.3
QL10p057561 Quercus lobata HOM05D004461 ORTHO05D005543 2.6e-137 492.3 283 82.3
Phvul.003G059900 Phaseolus vulgaris HOM05D004461 ORTHO05D005543 3.4e-137 491.9 284 79.6
Thhalv10005739m.g Eutrema salsugineum HOM05D004461 ORTHO05D005543 5.8e-137 491.1 283 80.2
SalBow1G4521 Salvia bowleyana HOM05D004461 ORTHO05D005543 5.8e-137 491.1 283 80.2
SalBow1G6497 Salvia bowleyana HOM05D004461 ORTHO05D005543 5.8e-137 491.1 283 80.2
BraA07t30125Z Brassica rapa HOM05D004461 ORTHO05D005543 7.6e-137 490.7 283 80.6
Psat7g119400 Pisum sativum HOM05D004461 ORTHO05D005543 7.6e-137 490.7 284 80.6
MD02G1004400 Malus domestica HOM05D004461 ORTHO05D005543 1.0e-136 490.3 283 80.6
Nitab4.5_0000474g0010 Nicotiana tabacum HOM05D004461 ORTHO05D005543 2.2e-136 489.2 283 81.3
Sp5g03430 Schrenkiella parvula HOM05D004461 ORTHO05D005543 2.2e-136 489.2 283 79.9
AL5G41810 Arabidopsis lyrata HOM05D004461 ORTHO05D005543 2.9e-136 488.8 283 79.9
Gohir.D09G212800 Gossypium hirsutum HOM05D004461 ORTHO05D005543 3.8e-136 488.4 283 80.6
Gorai.006G232600 Gossypium raimondii HOM05D004461 ORTHO05D005543 3.8e-136 488.4 283 80.6
Nitab4.5_0002660g0030 Nicotiana tabacum HOM05D004461 ORTHO05D005543 3.8e-136 488.4 283 81.3
Glyma.02G138500 Glycine max HOM05D004461 ORTHO05D005543 4.9e-136 488.0 284 79.9
SGA_v2.0_scaffold90G27634 Striga asiatica HOM05D004461 ORTHO05D005543 4.9e-136 488.0 283 82.0
CSS0001430 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 8.4e-136 487.3 283 80.6
AT3G59770 Arabidopsis thaliana HOM05D004461 ORTHO05D005543 1.4e-135 486.5 283 79.5
Medtr4g087530 Medicago truncatula HOM05D004461 ORTHO05D005543 1.4e-135 486.5 284 80.3
Gohir.A09G213618 Gossypium hirsutum HOM05D004461 ORTHO05D005543 1.9e-135 486.1 283 80.2
Lalb_Chr16g0384381 Lupinus albus HOM05D004461 ORTHO05D005543 1.9e-135 486.1 284 80.3
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 2.5e-135 485.7 284 80.6
Aa31LG10G14020 Aethionema arabicum HOM05D004461 ORTHO05D005543 3.2e-135 485.3 283 79.5
Migut.A00584 Erythranthe guttata HOM05D004461 ORTHO05D005543 3.2e-135 485.3 283 80.6
Rhsim09G0007800 Rhododendron simsii HOM05D004461 ORTHO05D005543 3.2e-135 485.3 283 80.2
arahy.Tifrunner.gnm1.ann1.XYX0FU Arachis hypogaea HOM05D004461 ORTHO05D005543 4.2e-135 485.0 284 80.3
BcaC07g40444 Brassica carinata HOM05D004461 ORTHO05D005543 5.5e-135 484.6 283 79.2
vmacro00682 Vaccinium macrocarpon HOM05D004461 ORTHO05D005543 7.1e-135 484.2 283 80.6
Sopen08g013610 Solanum pennellii HOM05D004461 ORTHO05D005543 1.2e-134 483.4 283 79.5
CSS0024115 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 1.6e-134 483.0 283 80.2
Solyc08g044400.3 Solanum lycopersicum HOM05D004461 ORTHO05D005543 1.6e-134 483.0 283 79.5
BcaB02g07448 Brassica carinata HOM05D004461 ORTHO05D005543 4.6e-134 481.5 283 79.2
CAN.G1190.30 Capsicum annuum HOM05D004461 ORTHO05D005543 4.6e-134 481.5 283 79.2
MSTRG.9726 Avicennia marina HOM05D004461 ORTHO05D005543 6.0e-134 481.1 283 78.8
CANSAT56G3181 Cannabis sativa HOM05D004461 ORTHO05D005543 1.0e-133 480.3 283 78.8
ClCG11G016890 Citrullus lanatus HOM05D004461 ORTHO05D005543 1.0e-133 480.3 283 80.9
ECA233G2329 Erigeron canadensis HOM05D004461 ORTHO05D005543 3.0e-133 478.8 283 79.5
Aqoxy1G02097 Aquilegia oxysepala HOM05D004461 ORTHO05D005543 3.9e-133 478.4 283 78.8
DCAR_005452 Daucus carota HOM05D004461 ORTHO05D005543 5.1e-133 478.0 283 79.5
TWI75G0299 Tripterygium wilfordii HOM05D004461 ORTHO05D005543 6.7e-133 477.6 283 78.8
A09p52040 Brassica napus HOM05D004461 ORTHO05D005543 1.5e-132 476.5 283 78.8
BraA09t40637Z Brassica rapa HOM05D004461 ORTHO05D005543 1.5e-132 476.5 283 78.8
FAN23G0135 Fragaria x ananassa HOM05D004461 ORTHO05D005543 1.5e-132 476.5 257 86.4
Lju470C15G3 Lonicera japonica HOM05D004461 ORTHO05D005543 1.5e-132 476.5 283 79.5
C08p34720 Brassica napus HOM05D004461 ORTHO05D005543 5.7e-132 474.6 283 78.4
BolC8t51074H Brassica oleracea HOM05D004461 ORTHO05D005543 5.7e-132 474.6 283 78.4
CSS0041950 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 1.6e-131 473.0 283 79.2
PSO541G3578 Papaver somniferum HOM05D004461 ORTHO05D005543 1.6e-131 473.0 283 78.4
BcaC07g40502 Brassica carinata HOM05D004461 ORTHO05D005543 2.1e-131 472.6 283 78.1
PSO675G1807 Papaver somniferum HOM05D004461 ORTHO05D005543 3.7e-131 471.9 283 78.4
unitig_736.g22475 Utricularia gibba HOM05D004461 ORTHO05D005543 2.4e-130 469.2 283 77.7
Nn1g07161 Nelumbo nucifera HOM05D004461 ORTHO05D005543 4.1e-130 468.4 283 78.1
HanXRQChr04g0109651 Helianthus annuus HOM05D004461 ORTHO05D005543 1.5e-129 466.5 283 78.8
Sed0020878 Sechium edule HOM05D004461 ORTHO05D005543 1.5e-129 466.5 283 78.1
Atru.chr4.1504 Acer truncatum HOM05D004461 ORTHO05D005543 2.6e-129 465.7 279 79.2
PGR042G2498 Punica granatum HOM05D004461 ORTHO05D005543 4.5e-129 464.9 283 76.3
Gorai.005G010100 Gossypium raimondii HOM05D004461 ORTHO05D005543 1.0e-128 463.8 283 77.4
AUR62002415 Chenopodium quinoa HOM05D004461 ORTHO05D005543 8.4e-128 460.7 283 77.0
CsaV3_4G032510 Cucumis sativus L. HOM05D004461 ORTHO05D005543 1.1e-127 460.3 283 76.7
Lsat_1_v5_gn_7_77561 Lactuca sativa HOM05D004461 ORTHO05D005543 1.1e-127 460.3 285 77.5
AUR62023774 Chenopodium quinoa HOM05D004461 ORTHO05D005543 1.9e-127 459.5 283 77.0
MELO3C026365.2 Cucumis melo HOM05D004461 ORTHO05D005543 2.5e-127 459.1 283 77.4
Lj4g0007039 Lotus japonicus HOM05D004461 ORTHO05D005543 9.3e-127 457.2 255 83.5
Peaxi162Scf00883g00910 Petunia axillaris HOM05D004461 ORTHO05D005543 2.7e-126 455.7 262 80.5
Nn1g03495 Nelumbo nucifera HOM05D004461 ORTHO05D005543 4.6e-126 454.9 283 76.0
Eucgr.L00012 Eucalyptus grandis HOM05D004461 ORTHO05D005543 8.7e-125 450.7 283 75.6
Ah.13g073400 Amaranthus hybridus HOM05D004461 ORTHO05D005543 9.7e-124 447.2 287 75.3
SHI26120 Sapria himalayana HOM05D004461 ORTHO05D005543 6.3e-123 444.5 283 74.6
Sed0010516 Sechium edule HOM05D004461 ORTHO05D005543 1.3e-115 420.2 283 70.7
HPP92_017806 Vanilla planifolia HOM05D004461 ORTHO05D005543 1.0e-112 410.6 289 68.2
ATR0796G101 Amborella trichopoda HOM05D004461 ORTHO05D005543 1.7e-107 393.3 289 65.4
Zm00001eb208570 Zea mays HOM05D004461 ORTHO05D005543 1.3e-104 383.6 288 64.6
ECA248G0881 Erigeron canadensis HOM05D004461 ORTHO05D005543 6.1e-102 374.8 283 65.7
Gohir.D02G008466 Gossypium hirsutum HOM05D004461 ORTHO05D005543 9.7e-100 367.5 215 79.5
CDE09G0162 Ceratophyllum demersum HOM05D004461 ORTHO05D005543 1.4e-98 363.6 297 60.6
HanXRQChr01g0023421 Helianthus annuus HOM05D004461 ORTHO05D005543 2.0e-92 343.2 285 63.2
SEGI_09597 Sequoiadendron giganteum HOM05D004461 ORTHO05D005543 1.3e-88 330.5 287 56.4
FAN23G0644 Fragaria x ananassa HOM05D004461 ORTHO05D005543 2.2e-88 329.7 192 81.2
Lsat_1_v5_gn_1_74200 Lactuca sativa HOM05D004461 ORTHO05D005543 1.6e-86 323.6 283 58.3
Pp3c2_24100 Physcomitrium patens HOM05D004461 ORTHO05D005543 1.1e-79 300.8 296 52.7
GSVIVG01038186001 Vitis vinifera HOM05D004461 ORTHO05D005543 3.3e-79 299.3 279 57.3
AagrBONN_evm.TU.Sc2ySwM_362.1413 Anthoceros agrestis HOM05D004461 ORTHO05D005543 1.6e-78 297.0 278 55.8
Mapoly0056s0107 Marchantia polymorpha HOM05D004461 ORTHO05D005543 1.8e-77 293.5 294 51.0
SMO165G0142 Selaginella moellendorffii HOM05D004461 ORTHO05D005543 6.8e-77 291.6 264 53.8
CBR_g55037 Chara braunii HOM05D004461 ORTHO05D005543 4.4e-44 182.6 403 31.5
MCO04G405 Micromonas commoda HOM05D004461 ORTHO05D005543 4.2e-42 176.0 325 33.2
PRCOL_00002927 Prasinoderma coloniale HOM05D004461 ORTHO05D005543 2.1e-33 147.1 295 31.5
Cre01.g009300 Chlamydomonas reinhardtii HOM05D004461 ORTHO05D005543 1.0e-16 91.7 186 33.3
BcaC07g40445 Brassica carinata HOM05D004461 ORTHO05D005543 4.8e-14 82.8 47 80.9
Os01g0355600 Oryza sativa ssp. japonica HOM05D004461 ORTHO05D005543 2.1e-09 67.4 39 76.9
Oeu015476.1 Olea europaea HOM05D001035 ORTHO05D003495 5.7e-07 59.3 236 26.7
Manes.11G014300 Manihot esculenta HOM05D001035 ORTHO05D001045 1.6e-06 57.8 207 26.1


User provided reference genes

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