Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 1.6e-191 672.5 330 100.0
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 2.7e-162 575.5 329 84.8
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 5.9e-162 574.3 325 85.8
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 1.1e-160 570.1 329 84.8
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 1.9e-160 569.3 329 84.5
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 3.3e-160 568.5 327 84.7
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 9.5e-160 567.0 329 83.3
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 9.5e-160 567.0 326 83.4
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 2.1e-159 565.8 322 86.0
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.8e-159 565.5 329 83.6
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 6.1e-159 564.3 327 84.1
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 1.0e-158 563.5 324 84.3
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 4.0e-158 561.6 324 84.0
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 4.0e-158 561.6 329 84.2
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.3e-156 556.6 322 84.5
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 3.7e-156 555.1 329 82.7
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 8.3e-156 553.9 325 83.4
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 3.1e-155 552.0 328 81.1
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 1.2e-154 550.1 328 80.8
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 2.0e-154 549.3 325 81.5
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 2.7e-154 548.9 326 83.7
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 7.8e-154 547.4 371 74.4
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 7.8e-154 547.4 328 80.5
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 1.0e-153 547.0 331 81.6
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 1.3e-153 546.6 329 82.1
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.3e-153 546.6 327 81.0
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.3e-153 546.6 327 81.3
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.3e-153 545.8 370 74.6
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 3.9e-153 545.0 329 81.5
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 5.0e-153 544.7 329 80.5
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 6.6e-153 544.3 329 80.2
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 8.6e-153 543.9 329 81.2
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 8.6e-153 543.9 329 81.5
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 1.1e-152 543.5 329 80.2
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.5e-152 543.1 337 80.4
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 1.5e-152 543.1 341 80.1
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 4.3e-152 541.6 320 82.8
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 9.5e-152 540.4 337 80.4
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 9.5e-152 540.4 330 80.6
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 1.6e-151 539.7 330 80.3
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.6e-151 539.7 337 79.8
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 1.4e-150 536.6 325 81.2
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 1.8e-150 536.2 329 80.2
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 2.3e-150 535.8 302 84.8
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 2.3e-150 535.8 329 79.9
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 8.9e-150 533.9 320 82.2
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 8.9e-150 533.9 325 81.2
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 1.2e-149 533.5 317 82.0
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 2.0e-149 532.7 325 80.9
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 2.6e-149 532.3 329 77.8
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 7.5e-149 530.8 325 78.5
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 7.5e-149 530.8 329 79.0
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 1.3e-148 530.0 326 80.1
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.3e-148 530.0 316 82.0
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 1.3e-148 530.0 328 79.6
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 1.3e-148 530.0 305 85.6
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 1.7e-148 529.6 324 78.4
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 1.7e-148 529.6 305 85.9
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 1.7e-148 529.6 328 76.8
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.2e-148 529.3 360 75.0
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 3.7e-148 528.5 329 76.9
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 1.1e-147 526.9 326 79.4
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 4.1e-147 525.0 338 77.8
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 7.0e-147 524.2 338 77.5
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 7.0e-147 524.2 326 79.1
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 1.0e-145 520.4 324 78.1
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 2.3e-145 519.2 329 77.8
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 3.0e-145 518.8 325 77.5
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 6.6e-145 517.7 325 76.9
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 2.5e-144 515.8 325 76.9
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 1.2e-143 513.5 329 76.3
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 7.5e-141 504.2 305 81.3
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.2e-138 496.9 332 75.3
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 2.1e-138 496.1 363 70.2
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 1.3e-137 493.4 299 81.9
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 3.0e-137 492.3 329 76.3
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 6.6e-137 491.1 326 75.5
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.3e-136 488.4 363 69.7
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 9.5e-136 487.3 306 78.8
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 6.2e-135 484.6 291 81.8
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 1.8e-134 483.0 346 69.9
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 1.8e-134 483.0 346 69.9
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 3.1e-134 482.3 329 74.2
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 1.2e-133 480.3 306 79.7
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 1.3e-132 476.9 347 70.3
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 1.7e-132 476.5 284 82.4
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.4e-131 473.4 382 65.2
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 3.5e-130 468.8 331 71.0
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 3.5e-130 468.8 330 73.9
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 3.5e-130 468.8 314 72.3
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 2.3e-129 466.1 323 72.1
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 2.8e-127 459.1 290 79.7
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 1.2e-125 453.8 288 77.8
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.7e-124 449.9 267 80.1
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 2.9e-124 449.1 381 63.8
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 3.8e-124 448.7 302 73.2
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 3.9e-121 438.7 326 70.2
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 3.6e-119 432.2 285 77.2
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 6.2e-119 431.4 302 70.2
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 8.1e-119 431.0 263 81.7
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 9.9e-117 424.1 288 75.0
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 1.2e-109 400.6 323 59.4
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 1.2e-109 400.6 321 60.4
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 3.8e-108 395.6 294 67.7
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 8.4e-108 394.4 323 65.0
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.4e-107 393.7 233 84.1
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.0e-105 387.5 322 58.1
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 2.3e-105 386.3 277 70.8
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 1.8e-102 376.7 288 68.8
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 2.4e-102 376.3 319 59.2
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 4.3e-96 355.5 314 54.5
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 4.8e-95 352.1 221 77.4
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 1.7e-92 343.6 246 69.5
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 1.6e-87 327.0 234 66.2
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 5.0e-84 315.5 220 71.8
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 2.4e-78 296.6 225 68.0
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 2.1e-74 283.5 370 43.5
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.3e-60 237.7 181 68.5
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 6.8e-57 225.3 150 77.3
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 2.2e-52 210.3 327 38.5
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.2e-50 204.5 143 69.9
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 1.3e-44 184.5 129 69.8
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 1.9e-43 180.6 107 77.6
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 1.7e-39 167.5 282 37.9
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.1e-34 150.6 97 75.3
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 2.8e-18 97.1 97 52.6
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 8.9e-17 92.0 63 66.7
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 8.4e-15 85.5 39 94.9
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 3.5e-13 80.1 50 82.0


User provided reference genes

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