Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10020707m.g Citrus clementina HOM05D017588 ORTHO05D019396 1.7e-189 666.0 370 100.0
Atru.chr9.1223 Acer truncatum HOM05D017588 ORTHO05D019396 7.1e-71 271.9 385 47.5
Manes.01G087600 Manihot esculenta HOM05D017588 ORTHO05D019396 1.1e-36 158.3 493 31.4
Potri.003G082900 Populus trichocarpa HOM05D017588 ORTHO05D019396 6.5e-32 142.5 500 32.0
Sabra03G0053600 Salix brachista HOM05D017588 ORTHO05D019396 7.1e-31 139.0 506 30.4
Potri.001G151601 Populus trichocarpa HOM05D017588 ORTHO05D019396 9.3e-31 138.7 502 31.9
Thecc.03G242200 Theobroma cacao HOM05D024389 ORTHO05D017870 1.5e-25 121.3 440 33.0
COL.COLO4_07505 Corchorus olitorius HOM05D024389 ORTHO05D017870 2.7e-22 110.5 372 31.5
Dinv21695 Davidia involucrata HOM05D012601 ORTHO05D011059 1.8e-21 107.8 420 29.3
CiPaw.11G070200 Carya illinoinensis HOM05D016577 ORTHO05D013291 2.3e-21 107.5 404 28.0
Duzib068G0325 Durio zibethinus HOM05D024389 ORTHO05D017870 1.8e-18 97.8 361 29.6
CANSAT21G0374 Cannabis sativa HOM05D018673 ORTHO05D020268 2.0e-17 94.4 418 28.5
QL12p008970 Quercus lobata HOM05D016577 ORTHO05D013291 3.0e-13 80.5 394 26.1
Dinv28869 Davidia involucrata HOM05D012601 ORTHO05D011059 6.7e-13 79.3 410 27.6
Lalb_Chr20g0110081 Lupinus albus HOM05D034499 ORTHO05D014589 2.5e-12 77.4 262 31.7
Rhsim07G0119100 Rhododendron simsii HOM05D012601 ORTHO05D011059 9.7e-12 75.5 400 26.5
Cc08_g11440 Coffea canephora HOM05D009881 ORTHO05D011059 1.4e-10 71.6 215 29.8
Cfa008664 Carpinus fangiana HOM05D016577 ORTHO05D013291 1.2e-09 68.6 140 33.6
ClCG00G001050 Citrullus lanatus HOM05D020612 ORTHO05D013291 2.0e-09 67.8 196 30.1
ClCG04G011020 Citrullus lanatus HOM05D020612 ORTHO05D013291 2.0e-09 67.8 196 30.1
Nn6g33779 Nelumbo nucifera HOM05D020612 ORTHO05D013291 6.5e-08 62.8 407 26.0
Actinidia31496 Actinidia chinensis HOM05D012601 ORTHO05D011059 1.1e-07 62.0 393 27.2
TAR375G0689 Trochodendron aralioides HOM05D012601 ORTHO05D011059 1.4e-07 61.6 218 28.0
Actinidia10863 Actinidia chinensis HOM05D012601 ORTHO05D011059 2.1e-06 57.8 152 34.9
MELO3C002095.2 Cucumis melo HOM05D020612 ORTHO05D013291 2.1e-06 57.8 186 28.0


User provided reference genes

Program Settings