Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10020238m.g Citrus clementina HOM05D004497 ORTHO05D005539 1.4e-235 819.3 431 100.0
Atru.chr3.3406 Acer truncatum HOM05D004497 ORTHO05D005539 9.1e-179 630.6 397 78.1
Thecc.03G125300 Theobroma cacao HOM05D004497 ORTHO05D005539 1.0e-161 573.9 396 72.2
GSVIVG01013111001 Vitis vinifera HOM05D004497 ORTHO05D005539 1.8e-158 563.1 380 72.6
Potri.015G092400 Populus trichocarpa HOM05D004497 ORTHO05D005539 2.6e-157 559.3 393 72.5
Duzib205G0501 Durio zibethinus HOM05D004497 ORTHO05D005539 3.4e-157 558.9 396 70.5
TAR625G0069 Trochodendron aralioides HOM05D004497 ORTHO05D005539 1.7e-156 556.6 399 70.4
Cfa013402 Carpinus fangiana HOM05D004497 ORTHO05D005539 2.2e-156 556.2 393 70.0
COL.COLO4_28066 Corchorus olitorius HOM05D004497 ORTHO05D005539 4.9e-156 555.1 395 69.4
Potri.012G095100 Populus trichocarpa HOM05D004497 ORTHO05D005539 4.9e-156 555.1 393 72.3
RcHm_v2.0_Chr7g0190661 Rosa chinensis HOM05D004497 ORTHO05D005539 8.3e-156 554.3 400 69.8
CiPaw.08G116800 Carya illinoinensis HOM05D004497 ORTHO05D005539 1.8e-155 553.1 394 69.0
QL10p004476 Quercus lobata HOM05D004497 ORTHO05D005539 7.0e-155 551.2 401 68.8
Actinidia25597 Actinidia chinensis HOM05D004497 ORTHO05D005539 9.2e-155 550.8 402 69.2
Haze_07247 Corylus avellana HOM05D004497 ORTHO05D005539 1.2e-154 550.4 358 73.5
Sabra15G0114200 Salix brachista HOM05D004497 ORTHO05D005539 1.2e-154 550.4 397 71.0
FvH4_5g07760 Fragaria vesca HOM05D004497 ORTHO05D005539 1.6e-154 550.1 396 69.4
FAN18G2816 Fragaria x ananassa HOM05D004497 ORTHO05D005539 3.5e-154 548.9 396 69.2
Gohir.A09G246200 Gossypium hirsutum HOM05D004497 ORTHO05D005539 4.5e-154 548.5 399 68.7
FAN08G0052 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.0e-153 547.4 396 69.4
Rhsim08G0187300 Rhododendron simsii HOM05D004497 ORTHO05D005539 2.3e-153 546.2 413 66.8
TAR629G1275 Trochodendron aralioides HOM05D004497 ORTHO05D005539 2.9e-153 545.8 405 68.9
Gohir.D09G246800 Gossypium hirsutum HOM05D004497 ORTHO05D005539 6.6e-153 544.7 397 68.5
QL93p0225_0015 Quercus lobata HOM05D004497 ORTHO05D005539 8.6e-153 544.3 400 68.0
TWI14G0260 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 8.6e-153 544.3 401 67.6
FAN04G2053 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.5e-152 543.5 396 68.9
QL07p000007 Quercus lobata HOM05D004497 ORTHO05D005539 1.5e-152 543.5 400 68.0
Gorai.006G271300 Gossypium raimondii HOM05D004497 ORTHO05D005539 1.2e-151 540.4 399 68.2
QL04p081834 Quercus lobata HOM05D004497 ORTHO05D005539 8.0e-151 537.7 414 65.9
CSS0032894 Camellia sinensis var. sinensis HOM05D004497 ORTHO05D005539 1.0e-150 537.3 398 68.8
Eucgr.C01065 Eucalyptus grandis HOM05D004497 ORTHO05D005539 1.8e-150 536.6 395 67.6
HanXRQChr05g0153981 Helianthus annuus HOM05D004497 ORTHO05D005539 3.1e-150 535.8 384 69.3
Eucgr.K00186 Eucalyptus grandis HOM05D004497 ORTHO05D005539 5.2e-150 535.0 394 67.0
MD14G1161100 Malus domestica HOM05D004497 ORTHO05D005539 5.2e-150 535.0 397 67.3
Nn4g26409 Nelumbo nucifera HOM05D004497 ORTHO05D005539 4.4e-149 531.9 393 66.9
CsaV3_1G009480 Cucumis sativus L. HOM05D004497 ORTHO05D005539 2.2e-148 529.6 396 66.2
Nitab4.5_0002978g0150 Nicotiana tabacum HOM05D004497 ORTHO05D005539 2.2e-148 529.6 432 64.4
Gohir.A12G276900 Gossypium hirsutum HOM05D004497 ORTHO05D005539 2.9e-148 529.3 358 72.1
Hund03342 Selenicereus undatus HOM05D004497 ORTHO05D005539 2.9e-148 529.3 365 70.7
MD06G1147200 Malus domestica HOM05D004497 ORTHO05D005539 3.7e-148 528.9 398 67.1
Sc10g0010400 Simmondsia chinensis HOM05D004497 ORTHO05D005539 2.4e-147 526.2 357 69.7
Nitab4.5_0000903g0080 Nicotiana tabacum HOM05D004497 ORTHO05D005539 5.4e-147 525.0 359 71.3
CANSAT56G3508 Cannabis sativa HOM05D004497 ORTHO05D005539 7.0e-147 524.6 392 66.8
Lalb_Chr03g0040831 Lupinus albus HOM05D004497 ORTHO05D005539 7.0e-147 524.6 398 64.6
Lsat_1_v5_gn_5_13520 Lactuca sativa HOM05D004497 ORTHO05D005539 6.0e-146 521.5 371 69.3
Manes.14G053800 Manihot esculenta HOM05D004497 ORTHO05D005539 1.1e-144 517.3 345 72.8
Dinv11148 Davidia involucrata HOM05D004497 ORTHO05D005539 2.5e-144 516.2 372 70.2
ECA246G4485 Erigeron canadensis HOM05D004497 ORTHO05D005539 3.3e-144 515.8 403 66.0
Sed0020059 Sechium edule HOM05D004497 ORTHO05D005539 5.6e-144 515.0 395 65.1
Glyma.16G034400 Glycine max HOM05D004497 ORTHO05D005539 1.6e-143 513.5 398 64.6
Psat3g028160 Pisum sativum HOM05D004497 ORTHO05D005539 4.7e-143 511.9 398 64.8
vmacro20468 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 6.2e-143 511.5 436 59.2
EL10As4g23444 Beta vulgaris HOM05D004497 ORTHO05D005539 8.0e-143 511.1 410 64.1
Lj9A476T57 Lonicera japonica HOM05D004497 ORTHO05D005539 1.4e-142 510.4 340 72.4
ClCG03G003620 Citrullus lanatus HOM05D004497 ORTHO05D005539 2.3e-142 509.6 398 65.3
VMungo0331G1674 Vigna mungo HOM05D004497 ORTHO05D005539 1.5e-141 506.9 393 63.9
Solyc08g008160.4 Solanum lycopersicum HOM05D004497 ORTHO05D005539 3.4e-141 505.8 359 68.8
Glyma.07G068400 Glycine max HOM05D004497 ORTHO05D005539 4.4e-141 505.4 354 69.2
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea HOM05D004497 ORTHO05D005539 5.8e-141 505.0 397 65.0
Migut.I00519 Erythranthe guttata HOM05D004497 ORTHO05D005539 5.8e-141 505.0 378 68.5
FAN13G1359 Fragaria x ananassa HOM05D004497 ORTHO05D005539 5.8e-141 505.0 401 64.1
THA.LOC104820611 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 5.8e-141 505.0 369 67.2
PGSC0003DMG400005828 Solanum tuberosum HOM05D004497 ORTHO05D005539 7.5e-141 504.6 359 68.8
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea HOM05D004497 ORTHO05D005539 1.3e-140 503.8 397 64.7
Lj1g0020744 Lotus japonicus HOM05D004497 ORTHO05D005539 2.2e-140 503.1 401 64.1
SGA_v2.0_scaffold215G42316 Striga asiatica HOM05D004497 ORTHO05D005539 2.2e-140 503.1 399 64.9
Ca_09070_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 3.7e-140 502.3 398 63.8
PGR083G2085 Punica granatum HOM05D004497 ORTHO05D005539 4.9e-140 501.9 404 63.6
Ah.08g212900 Amaranthus hybridus HOM05D004497 ORTHO05D005539 8.3e-140 501.1 403 63.0
MBI11_g15865_MAGBIO Magnolia biondii HOM05D004497 ORTHO05D005539 1.1e-139 500.7 399 62.9
Sopen08g004010 Solanum pennellii HOM05D004497 ORTHO05D005539 2.4e-139 499.6 359 68.2
Ca_04603_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 4.1e-139 498.8 398 63.8
MSTRG.22910 Avicennia marina HOM05D004497 ORTHO05D005539 1.2e-138 497.3 396 64.1
MELO3C002347.2 Cucumis melo HOM05D004497 ORTHO05D005539 1.2e-138 497.3 340 71.2
TPR.G34454 Trifolium pratense HOM05D004497 ORTHO05D005539 2.1e-138 496.5 371 66.3
SalBow8G1477 Salvia bowleyana HOM05D004497 ORTHO05D005539 3.5e-138 495.7 397 64.0
Medtr7g106650 Medicago truncatula HOM05D004497 ORTHO05D005539 4.6e-138 495.4 398 62.1
THA.LOC104814264 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 4.6e-138 495.4 366 65.6
Peaxi162Scf00078g00424 Petunia axillaris HOM05D004497 ORTHO05D005539 7.8e-138 494.6 339 71.1
Cc05_g04600 Coffea canephora HOM05D004497 ORTHO05D005539 2.3e-137 493.0 394 64.2
Phvul.003G017500 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 3.0e-137 492.7 392 63.0
Dinv04858 Davidia involucrata HOM05D004497 ORTHO05D005539 1.2e-135 487.3 321 74.1
Oeu005018.3 Olea europaea HOM05D004497 ORTHO05D005539 1.2e-135 487.3 429 60.8
SalBow5G0098 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.8e-134 483.4 423 60.3
SalBow5G4825 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.8e-134 483.4 423 60.3
AT1G29320 Arabidopsis thaliana HOM05D004497 ORTHO05D005539 2.3e-134 483.0 399 60.9
CDE08G0729 Ceratophyllum demersum HOM05D004497 ORTHO05D005539 6.8e-134 481.5 361 65.4
AL1G43130 Arabidopsis lyrata HOM05D004497 ORTHO05D005539 1.7e-132 476.9 399 60.4
C03p75750 Brassica napus HOM05D004497 ORTHO05D005539 1.7e-132 476.9 363 62.8
BolC3t19835H Brassica oleracea HOM05D004497 ORTHO05D005539 1.7e-132 476.9 389 59.6
Sp1g25270 Schrenkiella parvula HOM05D004497 ORTHO05D005539 2.2e-132 476.5 363 63.4
Thhalv10007651m.g Eutrema salsugineum HOM05D004497 ORTHO05D005539 3.7e-132 475.7 399 60.7
BcaC01g00099 Brassica carinata HOM05D004497 ORTHO05D005539 4.9e-132 475.3 363 62.5
Aqoxy5G03475 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 6.4e-132 474.9 370 62.2
A08p25140 Brassica napus HOM05D004497 ORTHO05D005539 1.4e-131 473.8 363 62.8
Carub.0001s2754 Capsella rubella HOM05D004497 ORTHO05D005539 1.9e-131 473.4 400 60.0
PSO782G0077 Papaver somniferum HOM05D004497 ORTHO05D005539 2.4e-131 473.0 376 63.6
PSO063G4711 Papaver somniferum HOM05D004497 ORTHO05D005539 9.2e-131 471.1 376 63.3
BraA09t39216Z Brassica rapa HOM05D004497 ORTHO05D005539 1.6e-130 470.3 368 61.7
CARHR028640 Cardamine hirsuta HOM05D004497 ORTHO05D005539 2.1e-130 469.9 397 59.9
BcaB03g12154 Brassica carinata HOM05D004497 ORTHO05D005539 5.1e-129 465.3 364 61.8
BcaB07g32523 Brassica carinata HOM05D004497 ORTHO05D005539 6.6e-129 464.9 371 62.3
Prupe.1G584300 Prunus persica HOM05D004497 ORTHO05D005539 9.5e-128 461.1 400 60.5
BolC5t31537H Brassica oleracea HOM05D004497 ORTHO05D005539 4.7e-127 458.8 367 61.0
A09p36980 Brassica napus HOM05D004497 ORTHO05D005539 6.2e-127 458.4 367 59.9
BcaC05g26958 Brassica carinata HOM05D004497 ORTHO05D005539 1.8e-126 456.8 363 61.4
C05p28100 Brassica napus HOM05D004497 ORTHO05D005539 1.8e-126 456.8 363 61.4
TWI39G1139 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 1.8e-126 456.8 425 59.5
BraA08t34469Z Brassica rapa HOM05D004497 ORTHO05D005539 2.4e-126 456.4 430 54.4
AUR62025903 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.9e-123 446.8 398 59.8
Aa31LG6G6220 Aethionema arabicum HOM05D004497 ORTHO05D005539 7.8e-122 441.4 408 55.9
Cfa014010 Carpinus fangiana HOM05D004497 ORTHO05D005539 2.4e-118 429.9 400 57.8
CiPaw.11G010200 Carya illinoinensis HOM05D004497 ORTHO05D005539 5.3e-118 428.7 327 65.7
DCAR_012679 Daucus carota HOM05D004497 ORTHO05D005539 6.9e-118 428.3 366 60.7
Duzib068G0683 Durio zibethinus HOM05D004497 ORTHO05D005539 4.4e-117 425.6 290 72.4
Zm00001eb105680 Zea mays HOM05D004497 ORTHO05D005539 9.9e-117 424.5 362 59.1
Cpa.g.sc166.23 Carica papaya HOM05D004497 ORTHO05D005539 1.6e-114 417.2 291 70.1
HPP92_023861 Vanilla planifolia HOM05D004497 ORTHO05D005539 4.6e-114 415.6 399 53.4
ATR0171G018 Amborella trichopoda HOM05D004497 ORTHO05D005539 1.7e-113 413.7 373 54.7
AUR62025086 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.1e-110 404.4 344 61.0
AUR62032705 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.5e-106 389.4 410 52.7
SEGI_30468 Sequoiadendron giganteum HOM05D004497 ORTHO05D005539 1.3e-105 387.5 414 47.3
Sabra12G0069700 Salix brachista HOM05D004497 ORTHO05D005539 5.3e-102 375.6 291 64.3
Sed0003097 Sechium edule HOM05D004497 ORTHO05D005539 6.9e-102 375.2 288 65.6
SHI10599 Sapria himalayana HOM05D004497 ORTHO05D005539 4.5e-101 372.5 322 58.1
unitig_699.g19657 Utricularia gibba HOM05D004497 ORTHO05D005539 4.8e-95 352.4 400 49.2
Aqoxy5G03495 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 3.2e-91 339.7 293 57.3
Mapoly0079s0016 Marchantia polymorpha HOM05D004497 ORTHO05D005539 5.1e-89 332.4 374 46.8
Os07g0506700 Oryza sativa ssp. japonica HOM05D004497 ORTHO05D005539 2.5e-88 330.1 294 55.8
AUR62025094 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.4e-85 319.7 299 55.9
Pp3c13_24500 Physcomitrium patens HOM05D004497 ORTHO05D005539 7.7e-85 318.5 424 43.6
SMO165G0173 Selaginella moellendorffii HOM05D004497 ORTHO05D005539 1.0e-84 318.2 358 48.0
Nitab4.5_0003013g0030 Nicotiana tabacum HOM05D004497 ORTHO05D005539 7.7e-77 292.0 396 48.0
Zm00001eb322320 Zea mays HOM05D004497 ORTHO05D005539 1.4e-70 271.2 181 68.5
vmacro19222 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 3.8e-68 263.1 343 44.6
Actinidia19491 Actinidia chinensis HOM05D004497 ORTHO05D005539 4.8e-63 246.1 396 40.9
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 3.0e-57 226.9 301 42.9
AUR62029644 Chenopodium quinoa HOM05D004497 ORTHO05D005539 5.2e-57 226.1 228 54.4
SalBow8G1815 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.1e-51 208.4 185 61.6
AUR62025088 Chenopodium quinoa HOM05D004497 ORTHO05D005539 5.5e-51 206.1 236 47.5
RcHm_v2.0_Chr0c30g0501231 Rosa chinensis HOM05D004497 ORTHO05D005539 1.0e-49 201.8 365 37.5
RcHm_v2.0_Chr3g0452771 Rosa chinensis HOM05D004497 ORTHO05D005539 1.0e-49 201.8 365 37.5
CBR_g31949 Chara braunii HOM05D004497 ORTHO05D005539 3.7e-47 193.4 402 35.3
Ca_16680_v3 Cicer arietinum L. HOM05D000160 ORTHO05D000496 1.1e-46 191.8 134 67.9
RcHm_v2.0_Chr5g0041021 Rosa chinensis HOM05D004497 ORTHO05D005539 4.5e-45 186.4 366 36.3
AUR62025079 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.3e-31 141.7 157 49.7
Gohir.D13G181701 Gossypium hirsutum HOM05D004497 ORTHO05D005539 7.3e-27 125.9 104 58.7
Cre17.g718650 Chlamydomonas reinhardtii HOM05D004497 ORTHO05D005539 2.2e-23 114.4 381 25.2
MCO03G018 Micromonas commoda HOM05D004497 ORTHO05D005539 1.6e-21 108.2 185 33.5
PRCOL_00003967 Prasinoderma coloniale HOM05D004497 ORTHO05D005539 1.7e-20 104.8 181 34.8
TAR371G1248 Trochodendron aralioides HOM05D004497 ORTHO05D005539 2.8e-18 97.4 124 47.6
Oeu006698.1 Olea europaea HOM05D004497 ORTHO05D005539 1.1e-17 95.5 71 67.6
AUR62025092 Chenopodium quinoa HOM05D004497 ORTHO05D005539 8.4e-15 85.9 53 75.5
C04p39580 Brassica napus HOM05D004497 ORTHO05D005539 4.1e-14 83.6 82 53.7
BolC4t25523H Brassica oleracea HOM05D004497 ORTHO05D005539 4.1e-14 83.6 82 53.7
Phvul.003G017700 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 6.6e-12 76.3 75 53.3
COL.COLO4_36170 Corchorus olitorius HOM05D021494 ORTHO05D022415 2.5e-11 74.3 41 82.9


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