Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 3.8e-249 864.4 442 100.0
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 2.5e-168 595.9 373 79.1
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 2.2e-167 592.8 374 79.4
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 2.9e-164 582.4 370 79.2
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 1.6e-162 576.6 372 77.2
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 2.7e-162 575.9 375 77.9
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 3.0e-161 572.4 372 77.2
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 3.9e-161 572.0 373 76.4
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 3.9e-161 572.0 376 77.4
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 6.7e-161 571.2 374 76.7
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 6.7e-161 571.2 372 77.2
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 8.8e-161 570.9 372 77.4
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 8.8e-161 570.9 372 77.4
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 8.8e-161 570.9 372 77.2
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 1.1e-160 570.5 372 77.2
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 1.3e-159 567.0 374 77.8
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 4.8e-159 565.1 370 75.9
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 8.2e-159 564.3 373 75.9
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 8.2e-159 564.3 373 75.9
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 1.1e-158 563.9 364 78.0
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 1.2e-157 560.5 372 75.8
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 2.0e-157 559.7 340 80.9
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 2.6e-157 559.3 378 74.6
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 8.5e-156 554.3 372 76.3
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 1.9e-155 553.1 383 74.2
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 3.2e-155 552.4 374 75.4
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 4.2e-155 552.0 370 74.6
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 1.2e-154 550.4 377 72.7
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 1.2e-154 550.4 374 74.3
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 1.6e-154 550.1 380 73.9
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 2.1e-154 549.7 378 73.3
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 3.6e-154 548.9 373 74.8
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 4.7e-154 548.5 377 72.7
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 5.2e-153 545.0 373 75.3
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 5.2e-153 545.0 373 73.2
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 7.4e-152 541.2 425 66.4
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 7.4e-152 541.2 376 73.1
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 4.1e-150 535.4 376 72.1
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 5.3e-150 535.0 373 72.9
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 7.0e-150 534.6 376 72.3
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 9.1e-150 534.3 373 73.2
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 3.5e-149 532.3 311 81.7
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 5.9e-149 531.6 317 81.1
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 5.9e-149 531.6 373 71.0
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 1.7e-148 530.0 373 72.4
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 2.2e-148 529.6 317 80.8
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 2.9e-148 529.3 374 73.3
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 2.9e-148 529.3 373 72.1
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 3.8e-148 528.9 373 72.1
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 5.0e-148 528.5 372 71.0
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 1.5e-147 526.9 373 71.6
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 5.5e-147 525.0 373 71.3
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 7.2e-147 524.6 374 71.9
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 7.2e-147 524.6 372 71.8
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 9.4e-147 524.2 372 71.8
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 9.4e-147 524.2 376 70.7
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 9.4e-147 524.2 376 70.5
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 2.1e-146 523.1 372 71.5
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 3.6e-146 522.3 373 70.0
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 8.0e-146 521.2 385 70.4
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 1.8e-145 520.0 340 74.1
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 1.8e-145 520.0 376 70.7
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 5.2e-145 518.5 370 71.9
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 5.2e-145 518.5 375 70.4
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 5.2e-145 518.5 314 80.3
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 5.7e-144 515.0 402 67.7
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 2.2e-143 513.1 373 71.3
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 2.8e-143 512.7 379 68.9
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 6.3e-143 511.5 356 71.9
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 1.1e-142 510.8 376 69.1
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 1.4e-142 510.4 380 68.9
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.1e-139 500.7 299 79.9
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 1.1e-139 500.7 322 74.2
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 1.5e-139 500.4 366 69.1
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 1.9e-139 500.0 376 68.1
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 6.1e-138 495.0 374 69.5
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 6.1e-138 495.0 384 66.1
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 2.3e-137 493.0 379 68.9
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 2.6e-136 489.6 299 79.9
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 2.8e-135 486.1 371 67.1
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.4e-134 483.0 284 82.0
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 1.7e-132 476.9 361 68.4
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 6.1e-130 468.4 371 62.0
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 1.8e-129 466.8 299 76.3
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 6.8e-129 464.9 282 79.4
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 3.7e-127 459.1 372 61.6
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 5.4e-126 455.3 329 69.3
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 3.5e-125 452.6 371 64.4
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 1.3e-116 424.1 454 52.0
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 1.5e-112 410.6 249 80.3
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 4.4e-112 409.1 377 58.1
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.0e-104 383.6 271 68.6
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 1.0e-100 371.3 232 79.3
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 1.6e-98 364.0 324 55.2
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 2.4e-97 360.1 377 53.1
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 2.4e-97 360.1 377 53.1
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 6.8e-97 358.6 261 65.9
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 5.1e-92 342.4 207 80.2
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 3.6e-90 336.3 252 65.9
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 1.5e-88 330.9 275 58.9
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.3e-63 248.1 189 63.5
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 1.6e-53 214.5 167 65.3
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 4.3e-51 206.5 167 64.1
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 9.7e-43 178.7 125 76.0
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 1.9e-38 164.5 168 46.4
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 7.2e-38 162.5 151 59.6
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 3.1e-33 147.1 96 75.0
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 9.8e-27 125.6 119 49.6
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 1.1e-25 122.1 85 71.8
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 1.5e-19 101.7 86 61.6
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 9.8e-19 99.0 133 43.6
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 1.7e-07 61.6 48 68.8
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 1.7e-07 61.6 48 68.8
Pp3c23_2190 Physcomitrium patens HOM05D004123 ORTHO05D004768 7.3e-06 56.2 47 59.6


User provided reference genes

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