Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10018281m.g Citrus clementina HOM05D000045 ORTHO05D019418 9.5e-71 270.0 131 100.0
CSS0034723 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000611 9.0e-29 130.6 210 40.5
vmacro02839 Vaccinium macrocarpon HOM05D000045 ORTHO05D000611 9.0e-29 130.6 206 40.8
PSO832G2631 Papaver somniferum HOM05D000045 ORTHO05D000611 3.7e-22 108.6 207 34.3
MD05G1155300 Malus domestica HOM05D000045 ORTHO05D000611 8.1e-22 107.5 205 35.6
TAR362G1348 Trochodendron aralioides HOM05D000045 ORTHO05D000611 1.1e-21 107.1 196 35.2
PSO210G3678 Papaver somniferum HOM05D000045 ORTHO05D000611 5.3e-21 104.8 209 33.0
Nn1g09614 Nelumbo nucifera HOM05D000045 ORTHO05D000611 1.2e-20 103.6 198 35.9
Aqoxy2G04096 Aquilegia oxysepala HOM05D000045 ORTHO05D000611 4.9e-19 98.2 182 34.1
MD10G1149600 Malus domestica HOM05D000045 ORTHO05D000611 1.9e-18 96.3 204 34.3
Rhsim13G0054600 Rhododendron simsii HOM05D001360 ORTHO05D001231 1.1e-15 87.0 67 67.2
TAR636G3451 Trochodendron aralioides HOM05D000045 ORTHO05D000611 9.6e-15 84.0 211 29.9
QL09p047259 Quercus lobata HOM05D000045 ORTHO05D000611 6.3e-14 81.3 71 54.9
QL09p047543 Quercus lobata HOM05D000045 ORTHO05D000611 6.3e-14 81.3 71 54.9
Atru.chr6.3523 Acer truncatum HOM05D000001 ORTHO05D019418 8.2e-14 80.9 57 71.9
TAR362G0617 Trochodendron aralioides HOM05D000045 ORTHO05D000611 1.1e-13 80.5 202 29.2
Dinv28797 Davidia involucrata HOM05D001360 ORTHO05D001231 2.0e-12 76.3 57 61.4
TAR633G1868 Trochodendron aralioides HOM05D000045 ORTHO05D000611 2.6e-12 75.9 226 28.3
Aqoxy2G04123 Aquilegia oxysepala HOM05D000045 ORTHO05D000611 3.8e-11 72.0 201 26.4
TAR636G1785 Trochodendron aralioides HOM05D000045 ORTHO05D000611 2.5e-10 69.3 197 26.9
Dinv10450 Davidia involucrata HOM05D000045 ORTHO05D000611 4.2e-10 68.6 202 25.7
Potri.014G176500 Populus trichocarpa HOM05D000045 ORTHO05D000611 1.2e-09 67.0 206 25.7
GSVIVG01001896001 Vitis vinifera HOM05D000045 ORTHO05D000611 1.6e-09 66.6 202 24.8
QL10p049180 Quercus lobata HOM05D000045 ORTHO05D000611 2.1e-09 66.2 190 26.3
CiPaw.13G057700 Carya illinoinensis HOM05D000045 ORTHO05D000611 2.7e-09 65.9 204 24.5
Sabra14G0135100 Salix brachista HOM05D000045 ORTHO05D000611 3.5e-09 65.5 206 25.2
CSS0014841 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000611 4.6e-09 65.1 67 47.8
AT3G07500 Arabidopsis thaliana HOM05D000045 ORTHO05D000611 6.1e-09 64.7 201 25.9
MD10G1149900 Malus domestica HOM05D000045 ORTHO05D000611 1.0e-08 63.9 204 23.5
PSO675G2888 Papaver somniferum HOM05D000045 ORTHO05D000611 1.3e-08 63.5 203 24.1
Nn1g09619 Nelumbo nucifera HOM05D000045 ORTHO05D000611 2.3e-08 62.8 197 27.4
Prupe.8G188300 Prunus persica HOM05D000045 ORTHO05D000611 2.3e-08 62.8 204 23.5
TWI75G1823 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 2.3e-08 62.8 207 24.6
C05p59820 Brassica napus HOM05D000045 ORTHO05D000611 3.0e-08 62.4 188 27.1
BolC5t34636H Brassica oleracea HOM05D000045 ORTHO05D000611 3.0e-08 62.4 188 27.1
PSO017G5253 Papaver somniferum HOM05D000045 ORTHO05D000611 3.0e-08 62.4 203 24.1
Manes.13G055700 Manihot esculenta HOM05D000045 ORTHO05D000611 5.1e-08 61.6 207 24.2
TAR636G2070 Trochodendron aralioides HOM05D000045 ORTHO05D000611 5.1e-08 61.6 65 41.5
EL10Ac5g10594 Beta vulgaris HOM05D000045 ORTHO05D000611 6.7e-08 61.2 204 26.5
Manes.04G043400 Manihot esculenta HOM05D000045 ORTHO05D000611 6.7e-08 61.2 209 25.4
Thecc.04G178600 Theobroma cacao HOM05D000045 ORTHO05D000611 6.7e-08 61.2 200 25.0
Nn1g09620 Nelumbo nucifera HOM05D000045 ORTHO05D000611 8.7e-08 60.8 172 25.6
TAR636G0656 Trochodendron aralioides HOM05D000045 ORTHO05D000611 8.7e-08 60.8 71 40.8
Cpa.g.sc8.53 Carica papaya HOM05D000045 ORTHO05D000611 1.5e-07 60.1 204 25.5
Duzib138G0278 Durio zibethinus HOM05D000045 ORTHO05D000611 1.5e-07 60.1 199 24.1
Nn1g09610 Nelumbo nucifera HOM05D000045 ORTHO05D000611 1.5e-07 60.1 190 26.8
Nn5g31065 Nelumbo nucifera HOM05D000045 ORTHO05D000067 1.9e-07 59.7 66 50.0
Thecc.01G209100 Theobroma cacao HOM05D000045 ORTHO05D000611 1.9e-07 59.7 199 24.6
TWI18G1009 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 1.9e-07 59.7 198 24.2
BcaC05g29542 Brassica carinata HOM05D000045 ORTHO05D000611 2.5e-07 59.3 188 26.1
QL10p049133 Quercus lobata HOM05D000045 ORTHO05D000611 3.3e-07 58.9 201 23.4
Atru.chr4.1197 Acer truncatum HOM05D000045 ORTHO05D000611 4.3e-07 58.5 181 24.9
arahy.Tifrunner.gnm1.ann1.SFNX64 Arachis hypogaea HOM05D000045 ORTHO05D000611 4.3e-07 58.5 104 33.7
Gohir.A03G123700 Gossypium hirsutum HOM05D000045 ORTHO05D000611 4.3e-07 58.5 200 25.0
Nn5g31066 Nelumbo nucifera HOM05D000045 ORTHO05D000067 4.3e-07 58.5 66 50.0
Prupe.1G196000 Prunus persica HOM05D000045 ORTHO05D000611 4.3e-07 58.5 200 24.0
TAR636G2452 Trochodendron aralioides HOM05D000045 ORTHO05D000611 4.3e-07 58.5 189 26.5
GSVIVG01010761001 Vitis vinifera HOM05D000045 ORTHO05D000611 4.3e-07 58.5 61 36.1
Dinv35451 Davidia involucrata HOM05D000045 ORTHO05D000611 5.7e-07 58.2 84 41.7
MD05G1156200 Malus domestica HOM05D000045 ORTHO05D000611 5.7e-07 58.2 204 23.0
Sed0011457 Sechium edule HOM05D000045 ORTHO05D000611 5.7e-07 58.2 190 24.7
GSVIVG01010768001 Vitis vinifera HOM05D000045 ORTHO05D000611 5.7e-07 58.2 187 27.3
Atru.chr4.1222 Acer truncatum HOM05D000045 ORTHO05D000611 7.4e-07 57.8 199 25.1
CARHR082150 Cardamine hirsuta HOM05D000045 ORTHO05D000611 7.4e-07 57.8 198 25.3
Haze_01488 Corylus avellana HOM05D000045 ORTHO05D000611 7.4e-07 57.8 106 35.8
Haze_01486 Corylus avellana HOM05D000045 ORTHO05D000611 9.7e-07 57.4 66 47.0
Duzib133G0982 Durio zibethinus HOM05D000045 ORTHO05D000611 9.7e-07 57.4 197 24.4
Atru.chr3.4237 Acer truncatum HOM05D000045 ORTHO05D000611 1.3e-06 57.0 199 25.1
Ca_20964_v3 Cicer arietinum L. HOM05D000045 ORTHO05D000611 1.3e-06 57.0 201 26.4
Gohir.D07G167500 Gossypium hirsutum HOM05D000045 ORTHO05D000611 1.3e-06 57.0 198 24.2
MD05G1155500 Malus domestica HOM05D000045 ORTHO05D000611 1.3e-06 57.0 204 23.0
AL3G18820 Arabidopsis lyrata HOM05D000045 ORTHO05D000611 1.6e-06 56.6 201 24.9
BraA05t22802Z Brassica rapa HOM05D000045 ORTHO05D000611 1.6e-06 56.6 187 26.7
Haze_03583 Corylus avellana HOM05D000045 ORTHO05D000611 1.6e-06 56.6 66 45.5
FvH4_2g17601 Fragaria vesca HOM05D000045 ORTHO05D000611 1.6e-06 56.6 198 23.7
Gohir.A07G158900 Gossypium hirsutum HOM05D000045 ORTHO05D000611 1.6e-06 56.6 198 24.2
RcHm_v2.0_Chr1g0331031 Rosa chinensis HOM05D000045 ORTHO05D000067 1.6e-06 56.6 44 56.8
RcHm_v2.0_Chr6g0282551 Rosa chinensis HOM05D000045 ORTHO05D000611 1.6e-06 56.6 198 23.7
BcaC05g29540 Brassica carinata HOM05D000135 ORTHO05D000611 2.2e-06 56.2 200 23.5
A05p40710 Brassica napus HOM05D000045 ORTHO05D000611 2.2e-06 56.2 187 26.2
Manes.11G121700 Manihot esculenta HOM05D000045 ORTHO05D000611 2.2e-06 56.2 205 24.4
QL05p019493 Quercus lobata HOM05D000045 ORTHO05D000611 2.2e-06 56.2 66 43.9
Sabra02G0182400 Salix brachista HOM05D000001 ORTHO05D000003 2.2e-06 56.2 55 50.9
CiPaw.02G054500 Carya illinoinensis HOM05D000045 ORTHO05D000611 3.7e-06 55.5 199 25.6
PGR142G2342 Punica granatum HOM05D000045 ORTHO05D000611 3.7e-06 55.5 186 26.3
CDE08G0063 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 4.8e-06 55.1 87 37.9
PSO017G4008 Papaver somniferum HOM05D000045 ORTHO05D000067 4.8e-06 55.1 66 47.0
PSO170G0991 Papaver somniferum HOM05D000045 ORTHO05D000067 4.8e-06 55.1 66 47.0
vmacro02833 Vaccinium macrocarpon HOM05D000045 ORTHO05D000611 4.8e-06 55.1 202 23.8
Actinidia34597 Actinidia chinensis HOM05D000045 ORTHO05D000611 6.3e-06 54.7 200 26.5
FvH4_7g04941 Fragaria vesca HOM05D000045 ORTHO05D000067 6.3e-06 54.7 44 54.5
Solyc06g073210.4 Solanum lycopersicum HOM05D000045 ORTHO05D000611 6.3e-06 54.7 185 26.5
ClCG10G017250 Citrullus lanatus HOM05D000045 ORTHO05D000611 8.2e-06 54.3 190 24.2
Nn7g36622 Nelumbo nucifera HOM05D000045 ORTHO05D000611 8.2e-06 54.3 198 23.7
PSO832G2638 Papaver somniferum HOM05D000045 ORTHO05D000611 8.2e-06 54.3 63 41.3


User provided reference genes

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