Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10018265m.g Citrus clementina HOM05D003064 ORTHO05D001733 2.8e-67 258.5 129 100.0
Ciclev10017225m.g Citrus clementina HOM05D003064 ORTHO05D001733 2.1e-30 136.0 90 75.6
Potri.003G216000 Populus trichocarpa HOM05D003064 ORTHO05D001733 4.4e-28 128.3 87 70.1
Sabra03G0161100 Salix brachista HOM05D000664 ORTHO05D001733 3.7e-27 125.2 86 68.6
QL01p010317 Quercus lobata HOM05D003064 ORTHO05D001733 1.4e-26 123.2 88 63.6
Atru.chr3.2225 Acer truncatum HOM05D003064 ORTHO05D001733 2.4e-26 122.5 91 64.8
Potri.001G009300 Populus trichocarpa HOM05D003064 ORTHO05D001733 3.1e-26 122.1 87 67.8
Thecc.09G214600 Theobroma cacao HOM05D003064 ORTHO05D001733 4.1e-26 121.7 95 61.1
Cfa009621 Carpinus fangiana HOM05D003064 ORTHO05D001733 1.2e-25 120.2 88 63.6
COL.COLO4_10451 Corchorus olitorius HOM05D003064 ORTHO05D001733 1.6e-25 119.8 88 61.4
Sabra01G0007200 Salix brachista HOM05D003064 ORTHO05D000001 2.7e-25 119.0 88 69.3
Haze_22990 Corylus avellana HOM05D003064 ORTHO05D001733 1.0e-24 117.1 84 65.5
arahy.Tifrunner.gnm1.ann1.0YUQ4V Arachis hypogaea HOM05D003064 ORTHO05D001733 1.7e-24 116.3 80 67.5
arahy.Tifrunner.gnm1.ann1.MW6VFJ Arachis hypogaea HOM05D003064 ORTHO05D001733 1.7e-24 116.3 80 67.5
Eucgr.B03629 Eucalyptus grandis HOM05D003064 ORTHO05D001733 2.3e-24 115.9 91 62.6
Phvul.002G181000 Phaseolus vulgaris HOM05D003064 ORTHO05D001733 2.9e-24 115.5 95 63.2
PGR102G1745 Punica granatum HOM05D003064 ORTHO05D001733 2.9e-24 115.5 81 69.1
Prupe.6G010800 Prunus persica HOM05D003064 ORTHO05D001733 3.8e-24 115.2 81 66.7
CiPaw.13G171900 Carya illinoinensis HOM05D003064 ORTHO05D001733 5.0e-24 114.8 89 61.8
Ca_18172_v3 Cicer arietinum L. HOM05D003064 ORTHO05D001733 3.3e-23 112.1 84 61.9
Glyma.05G141600 Glycine max HOM05D003064 ORTHO05D001733 3.3e-23 112.1 80 67.5
Psat7g081160 Pisum sativum HOM05D003064 ORTHO05D001733 3.3e-23 112.1 80 67.5
MD03G1010900 Malus domestica HOM05D003064 ORTHO05D001733 4.3e-23 111.7 92 59.8
FvH4_3g44720 Fragaria vesca HOM05D003064 ORTHO05D001733 5.6e-23 111.3 81 65.4
MD11G1012700 Malus domestica HOM05D003064 ORTHO05D001733 5.6e-23 111.3 81 66.7
TPR.G9574 Trifolium pratense HOM05D003064 ORTHO05D001733 5.6e-23 111.3 80 66.2
Duzib168G1091 Durio zibethinus HOM05D003064 ORTHO05D001733 7.3e-23 110.9 86 61.6
Glyma.08G097000 Glycine max HOM05D003064 ORTHO05D001733 2.8e-22 109.0 80 65.0
VMungo0251G1179 Vigna mungo HOM05D003064 ORTHO05D001733 1.0e-21 107.1 83 60.2
Manes.15G104400 Manihot esculenta HOM05D003064 ORTHO05D001733 3.0e-21 105.5 85 62.4
RcHm_v2.0_Chr5g0081381 Rosa chinensis HOM05D003064 ORTHO05D001733 3.0e-21 105.5 81 63.0
TAR633G2572 Trochodendron aralioides HOM05D003064 ORTHO05D001733 1.5e-20 103.2 94 53.2
Lalb_Chr07g0187611 Lupinus albus HOM05D003064 ORTHO05D001733 1.3e-19 100.1 80 60.0
CiPaw.12G019000 Carya illinoinensis HOM05D003064 ORTHO05D001733 2.2e-19 99.4 88 53.4
AUR62019204 Chenopodium quinoa HOM05D003064 ORTHO05D001733 6.4e-19 97.8 94 53.2
Actinidia06296 Actinidia chinensis HOM05D003064 ORTHO05D001733 1.1e-18 97.1 91 53.8
EL10Ac4g10343 Beta vulgaris HOM05D003064 ORTHO05D001733 1.4e-18 96.7 94 52.1
AUR62000034 Chenopodium quinoa HOM05D003064 ORTHO05D001733 1.8e-18 96.3 94 52.1
DCAR_024359 Daucus carota HOM05D003064 ORTHO05D001733 1.8e-18 96.3 91 54.9
CSS0011912 Camellia sinensis var. sinensis HOM05D003064 ORTHO05D001733 2.4e-18 95.9 91 52.7
FAN16G2075 Fragaria x ananassa HOM05D003064 ORTHO05D001733 2.4e-18 95.9 72 68.1
Ah.06g193080 Amaranthus hybridus HOM05D003064 ORTHO05D001733 4.1e-18 95.1 94 51.1
FAN11G2614 Fragaria x ananassa HOM05D003064 ORTHO05D001733 5.4e-18 94.7 62 72.6
FAN21G0865 Fragaria x ananassa HOM05D000001 ORTHO05D010412 9.2e-18 94.0 83 56.6
Lsat_1_v5_gn_2_101540 Lactuca sativa HOM05D003064 ORTHO05D001733 1.2e-17 93.6 87 48.3
FAN25G0198 Fragaria x ananassa HOM05D000001 ORTHO05D010412 4.6e-17 91.7 83 56.6
MBI13_g29645_MAGBIO Magnolia biondii HOM05D003064 ORTHO05D001733 3.3e-15 85.5 94 48.9
RcHm_v2.0_Chr5g0081421 Rosa chinensis HOM05D003064 ORTHO05D001733 1.1e-13 80.5 55 72.7
MELO3C000306.2 Cucumis melo HOM05D003064 ORTHO05D001733 2.9e-11 72.4 90 40.0
CsaV3_1G042240 Cucumis sativus L. HOM05D003064 ORTHO05D001733 2.9e-11 72.4 90 40.0
ClCG03G013980 Citrullus lanatus HOM05D003064 ORTHO05D001733 2.4e-10 69.3 87 36.8
Sed0020809 Sechium edule HOM05D003064 ORTHO05D001733 3.2e-10 68.9 85 40.0
Sed0021387 Sechium edule HOM05D003064 ORTHO05D001733 1.7e-08 63.2 54 48.1
PSO339G2776 Papaver somniferum HOM05D003064 ORTHO05D001733 3.3e-07 58.9 80 42.5
TAR369G0713 Trochodendron aralioides HOM05D003064 ORTHO05D001733 8.1e-06 54.3 75 37.3


User provided reference genes

Program Settings