Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 9.9e-165 583.6 334 100.0
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 7.3e-59 231.9 318 51.9
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 1.8e-41 174.1 375 42.1
Potri.011G077700 Populus trichocarpa HOM05D009852 ORTHO05D009761 5.3e-41 172.6 376 40.4
Thecc.06G158200 Theobroma cacao HOM05D009852 ORTHO05D009761 1.2e-40 171.4 350 47.1
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 2.0e-40 170.6 363 37.7
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 2.0e-40 170.6 369 40.4
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 6.4e-39 165.6 384 37.0
Potri.001G354600 Populus trichocarpa HOM05D009852 ORTHO05D009761 2.3e-36 157.1 357 44.3
Duzib192G0106 Durio zibethinus HOM05D009852 ORTHO05D009761 1.5e-35 154.5 351 46.4
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 5.6e-35 152.5 383 38.4
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 1.6e-34 151.0 347 42.9
Duzib160G0535 Durio zibethinus HOM05D009852 ORTHO05D009761 2.8e-34 150.2 345 43.5
Cfa001036 Carpinus fangiana HOM05D009013 ORTHO05D009761 3.6e-34 149.8 381 37.5
Gohir.D06G140600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 8.1e-34 148.7 347 42.4
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 3.1e-33 146.7 320 36.6
Manes.15G116600 Manihot esculenta HOM05D009852 ORTHO05D009761 5.3e-33 146.0 395 40.0
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 4.5e-32 142.9 350 36.0
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 2.1e-29 134.0 376 34.6
Duzib235G1088 Durio zibethinus HOM05D009852 ORTHO05D009761 2.7e-29 133.7 412 36.9
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 7.9e-29 132.1 376 34.3
Gorai.009G158300 Gossypium raimondii HOM05D009852 ORTHO05D009761 1.3e-28 131.3 323 39.6
COL.COLO4_22804 Corchorus olitorius HOM05D009852 ORTHO05D009761 3.0e-28 130.2 304 39.1
Gohir.D05G154000 Gossypium hirsutum HOM05D009852 ORTHO05D009761 3.9e-28 129.8 323 39.3
Manes.17G064400 Manihot esculenta HOM05D009852 ORTHO05D009761 5.3e-25 119.4 377 34.0
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 1.5e-24 117.9 351 34.5
Gohir.A06G135400 Gossypium hirsutum HOM05D009852 ORTHO05D009761 2.0e-24 117.5 307 38.8
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 4.5e-24 116.3 535 26.9
CSS0047309 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 6.5e-23 112.5 442 34.4
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 8.4e-23 112.1 340 34.1
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 7.1e-22 109.0 328 30.8
Gohir.A05G151600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 2.7e-21 107.1 318 34.3
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 3.5e-21 106.7 349 33.5
Sabra16G0233200 Salix brachista HOM05D009852 ORTHO05D009761 3.5e-21 106.7 327 34.6
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 6.0e-21 105.9 347 32.9
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 3.0e-20 103.6 313 32.6
Lalb_Chr23g0275971 Lupinus albus HOM05D009013 ORTHO05D009761 5.1e-20 102.8 345 30.1
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 8.7e-20 102.1 357 32.5
Glyma.08G121600 Glycine max HOM05D009013 ORTHO05D009761 2.5e-19 100.5 341 35.5
Sabra11G0072300 Salix brachista HOM05D009852 ORTHO05D009761 1.6e-18 97.8 199 43.7
Oeu046855.1 Olea europaea HOM05D012266 ORTHO05D011876 3.7e-18 96.7 370 33.2
Rhsim02G0193600 Rhododendron simsii HOM05D014645 ORTHO05D009761 4.8e-18 96.3 373 28.7
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 8.2e-18 95.5 335 30.7
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 1.4e-17 94.7 474 27.0
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 9.0e-17 92.0 348 33.0
Gohir.A10G031700 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.5e-16 91.3 334 36.5
VMungo0251G0903 Vigna mungo HOM05D009013 ORTHO05D009761 7.6e-16 89.0 336 28.0
Dinv32301 Davidia involucrata HOM05D009013 ORTHO05D009761 1.3e-15 88.2 268 37.3
FvH4_3g06440 Fragaria vesca HOM05D014736 ORTHO05D009761 2.2e-15 87.4 136 37.5
Lj6g0000102 Lotus japonicus HOM05D009013 ORTHO05D009761 6.5e-15 85.9 360 29.7
MD10G1268000 Malus domestica HOM05D014736 ORTHO05D009761 8.5e-15 85.5 155 35.5
Phvul.002G244200 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 1.1e-14 85.1 337 27.6
FAN11G2258 Fragaria x ananassa HOM05D014736 ORTHO05D009761 1.4e-14 84.7 136 36.8
FAN25G1841 Fragaria x ananassa HOM05D014736 ORTHO05D009761 1.9e-14 84.3 136 36.8
CsaV3_6G051330 Cucumis sativus L. HOM05D022667 ORTHO05D009761 2.5e-14 84.0 335 29.9
Lalb_Chr13g0295461 Lupinus albus HOM05D009013 ORTHO05D009761 2.5e-14 84.0 349 30.1
MELO3C007172.2 Cucumis melo HOM05D022667 ORTHO05D009761 5.5e-14 82.8 338 30.5
MD05G1292200 Malus domestica HOM05D014736 ORTHO05D009761 2.1e-13 80.9 236 31.4
Sed0006555 Sechium edule HOM05D022667 ORTHO05D009761 3.6e-13 80.1 337 31.2
Cc00_g03210 Coffea canephora HOM05D012094 ORTHO05D009761 3.0e-12 77.0 399 31.6
FAN21G2246 Fragaria x ananassa HOM05D014736 ORTHO05D009761 3.0e-12 77.0 130 35.4
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 3.0e-12 77.0 335 27.8
arahy.Tifrunner.gnm1.ann1.3YWF5K Arachis hypogaea HOM05D009013 ORTHO05D009761 5.1e-12 76.3 351 31.1
Psat1g018200 Pisum sativum HOM05D009013 ORTHO05D009761 5.1e-12 76.3 344 27.3
Actinidia07666 Actinidia chinensis HOM05D014645 ORTHO05D009761 6.7e-12 75.9 155 34.8
Oeu021526.1 Olea europaea HOM05D012266 ORTHO05D011876 8.7e-12 75.5 368 32.3
Nitab4.5_0003714g0090 Nicotiana tabacum HOM05D012094 ORTHO05D011876 1.1e-11 75.1 360 29.4
TPR.G22001 Trifolium pratense HOM05D009013 ORTHO05D009761 1.1e-11 75.1 306 28.4
RcHm_v2.0_Chr5g0012861 Rosa chinensis HOM05D014736 ORTHO05D009761 1.5e-11 74.7 128 37.5
arahy.Tifrunner.gnm1.ann1.5V604V Arachis hypogaea HOM05D009013 ORTHO05D009761 1.9e-11 74.3 347 30.0
ClCG01G024180 Citrullus lanatus HOM05D022667 ORTHO05D009761 2.5e-11 73.9 334 29.0
TAR624G0539 Trochodendron aralioides HOM05D041535 ORTHO05D009761 4.3e-11 73.2 264 31.4
Eucgr.D00345 Eucalyptus grandis HOM05D014736 ORTHO05D009761 5.7e-11 72.8 256 29.7
Thhalv10017155m.g Eutrema salsugineum HOM05D008719 ORTHO05D010898 1.3e-10 71.6 337 27.0
DCAR_003953 Daucus carota HOM05D009013 ORTHO05D009761 2.8e-10 70.5 379 28.2
Gohir.D10G032500 Gossypium hirsutum HOM05D009852 ORTHO05D009761 4.8e-10 69.7 86 47.7
Gorai.011G034400 Gossypium raimondii HOM05D009852 ORTHO05D009761 4.8e-10 69.7 86 47.7
Actinidia19483 Actinidia chinensis HOM05D014645 ORTHO05D009761 6.3e-10 69.3 361 27.1
CsaV3_1G032810 Cucumis sativus L. HOM05D025335 ORTHO05D025087 8.2e-10 68.9 367 28.3
ClCG03G007220 Citrullus lanatus HOM05D025335 ORTHO05D025087 1.4e-09 68.2 380 28.2
DCAR_007913 Daucus carota HOM05D009013 ORTHO05D009761 1.4e-09 68.2 310 31.0
TPR.G31355 Trifolium pratense HOM05D009013 ORTHO05D009761 1.4e-09 68.2 344 28.2
Glyma.13G051300 Glycine max HOM05D009013 ORTHO05D009761 2.4e-09 67.4 52 55.8
Oeu001056.1 Olea europaea HOM05D012266 ORTHO05D011876 2.4e-09 67.4 356 31.7
MELO3C002700.2 Cucumis melo HOM05D025335 ORTHO05D025087 9.1e-09 65.5 361 28.0
AL4G30240 Arabidopsis lyrata HOM05D008719 ORTHO05D010898 1.5e-08 64.7 336 26.8
SalBow8G3146 Salvia bowleyana HOM05D012266 ORTHO05D011876 1.5e-08 64.7 343 25.9
Ca_25278_v3 Cicer arietinum L. HOM05D009013 ORTHO05D009761 2.0e-08 64.3 339 27.1
PSO541G1916 Papaver somniferum HOM05D022831 ORTHO05D023597 2.0e-08 64.3 107 39.3
AT1G29530 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 2.6e-08 63.9 152 34.9
EL10Ac8g19799 Beta vulgaris HOM05D018558 ORTHO05D018254 1.0e-07 62.0 338 27.2
PSO675G7770 Papaver somniferum HOM05D022831 ORTHO05D023597 1.7e-07 61.2 107 38.3
Sed0003972 Sechium edule HOM05D025335 ORTHO05D025087 1.7e-07 61.2 330 28.5
SalBow7G2103 Salvia bowleyana HOM05D012266 ORTHO05D011876 3.8e-07 60.1 336 28.0
Nitab4.5_0001283g0020 Nicotiana tabacum HOM05D012094 ORTHO05D011876 5.0e-07 59.7 400 27.2
Sp4g16580 Schrenkiella parvula HOM05D008719 ORTHO05D010898 5.0e-07 59.7 172 30.8
Sed0023686 Sechium edule HOM05D022667 ORTHO05D009761 1.1e-06 58.5 337 27.6
Actinidia32517 Actinidia chinensis HOM05D021637 ORTHO05D023291 1.4e-06 58.2 90 41.1
BcaC02g11497 Brassica carinata HOM05D008719 ORTHO05D010898 1.4e-06 58.2 65 49.2
CARHR028920 Cardamine hirsuta HOM05D008719 ORTHO05D010898 2.5e-06 57.4 130 36.9
THA.LOC104812838 Tarenaya hassleriana HOM05D010784 ORTHO05D012957 2.5e-06 57.4 335 30.4
THA.LOC104814270 Tarenaya hassleriana HOM05D008719 ORTHO05D010898 2.5e-06 57.4 60 46.7
Psat1g020440 Pisum sativum HOM05D009013 ORTHO05D009761 3.2e-06 57.0 481 23.7
AL1G43370 Arabidopsis lyrata HOM05D008719 ORTHO05D010898 4.2e-06 56.6 152 34.2
MSTRG.16199 Avicennia marina HOM05D012266 ORTHO05D011876 4.2e-06 56.6 362 28.2
Medtr6g068870 Medicago truncatula HOM05D009013 ORTHO05D009761 4.2e-06 56.6 330 24.5
Sed0021783 Sechium edule HOM05D025335 ORTHO05D025087 4.2e-06 56.6 361 28.3
BcaB02g09560 Brassica carinata HOM05D008719 ORTHO05D010898 5.5e-06 56.2 316 25.9
Thhalv10008596m.g Eutrema salsugineum HOM05D008719 ORTHO05D010898 5.5e-06 56.2 335 26.3
Medtr2g049330 Medicago truncatula HOM05D009013 ORTHO05D009761 5.5e-06 56.2 338 33.1
Dinv00978 Davidia involucrata HOM05D021637 ORTHO05D023291 7.2e-06 55.8 187 31.0
Actinidia11203 Actinidia chinensis HOM05D021637 ORTHO05D023291 9.4e-06 55.5 81 40.7


User provided reference genes

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