Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 5.0e-207 724.2 355 100.0
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 3.8e-146 521.9 354 74.3
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 2.7e-144 515.8 351 73.5
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 4.6e-144 515.0 312 81.1
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 1.5e-142 510.0 303 83.2
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 1.1e-140 503.8 315 78.7
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 1.2e-139 500.4 395 66.1
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 1.3e-138 496.9 322 75.5
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 3.8e-138 495.4 327 74.3
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 3.5e-136 488.8 333 73.6
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 3.0e-135 485.7 326 73.0
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 3.9e-135 485.3 313 77.6
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 5.1e-135 485.0 309 77.7
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.1e-134 483.8 313 77.3
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 1.9e-134 483.0 300 78.0
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 5.6e-134 481.5 353 70.0
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 7.3e-134 481.1 308 75.0
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 9.6e-134 480.7 327 70.9
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 1.6e-133 479.9 308 75.6
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 1.1e-132 477.2 297 77.4
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 1.4e-132 476.9 323 72.1
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 9.0e-132 474.2 329 71.7
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 1.2e-131 473.8 350 69.1
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 1.5e-131 473.4 321 73.8
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 2.6e-131 472.6 321 72.0
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 3.4e-131 472.2 301 77.4
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 7.6e-131 471.1 338 70.1
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 1.3e-130 470.3 300 79.0
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 3.8e-130 468.8 339 69.3
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 2.4e-129 466.1 290 74.8
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 3.2e-129 465.7 288 77.8
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 1.6e-128 463.4 307 73.6
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 1.6e-128 463.4 287 78.0
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 3.5e-128 462.2 342 66.4
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 3.5e-128 462.2 339 70.2
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 4.6e-128 461.8 288 77.8
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 7.9e-128 461.1 293 74.4
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 2.3e-127 459.5 357 66.7
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 5.1e-127 458.4 287 76.0
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 8.7e-127 457.6 321 72.0
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 2.5e-126 456.1 321 69.8
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 3.3e-126 455.7 311 72.3
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 9.6e-126 454.1 341 67.2
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 6.2e-125 451.4 286 76.6
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 6.2e-125 451.4 287 76.3
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 3.1e-124 449.1 297 74.1
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 2.0e-123 446.4 296 74.0
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 3.4e-123 445.7 271 78.2
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 7.6e-123 444.5 313 71.2
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 7.6e-123 444.5 319 69.0
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 2.2e-122 443.0 339 66.4
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 2.2e-122 443.0 358 63.7
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 3.8e-122 442.2 332 66.6
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 1.1e-121 440.7 324 67.3
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 1.1e-121 440.7 288 74.0
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 1.9e-121 439.9 307 71.0
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 1.9e-121 439.9 297 71.4
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 1.9e-121 439.9 314 69.1
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 3.2e-121 439.1 304 71.4
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 3.2e-121 439.1 301 70.1
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 7.1e-121 438.0 287 72.5
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 1.2e-120 437.2 285 74.7
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 1.6e-120 436.8 286 74.8
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 4.6e-120 435.3 349 62.5
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 4.6e-120 435.3 322 66.8
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 7.9e-120 434.5 324 67.0
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 1.0e-119 434.1 285 74.7
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 1.3e-119 433.7 304 69.4
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.3e-119 433.7 347 64.8
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 5.1e-119 431.8 345 61.7
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 6.7e-119 431.4 339 64.6
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 6.7e-119 431.4 303 68.0
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 1.9e-118 429.9 271 73.1
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 1.9e-118 429.9 290 70.3
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 5.6e-118 428.3 300 69.7
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 7.4e-118 427.9 290 70.7
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 4.5e-115 418.7 328 63.7
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 2.2e-114 416.4 312 66.0
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 7.1e-113 411.4 307 68.1
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 3.4e-107 392.5 306 64.7
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 1.0e-106 391.0 293 66.6
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 1.3e-106 390.6 268 72.0
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.0e-103 379.4 281 67.3
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.0e-103 379.4 273 69.2
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 3.0e-103 379.4 268 68.7
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 3.3e-102 375.9 315 60.3
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 3.3e-102 375.9 286 63.6
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 3.1e-100 369.4 217 80.6
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.0e-98 364.4 298 63.8
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.1e-97 360.9 275 66.2
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 4.2e-97 359.0 310 57.7
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 3.0e-95 352.8 266 62.8
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 1.0e-90 337.8 290 60.7
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 5.9e-83 312.0 208 71.2
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 6.5e-82 308.5 251 63.7
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 3.1e-76 289.7 389 41.9
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.3e-74 284.3 235 61.7
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 1.0e-66 258.1 158 77.8
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.5e-65 254.2 160 76.9
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.2e-64 251.1 313 49.2
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 4.9e-61 239.2 170 68.2
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 9.2e-60 235.0 142 81.0
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 4.3e-49 199.5 195 56.4
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.7e-48 196.1 251 45.8
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 6.4e-45 185.7 107 77.6
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 4.1e-44 183.0 107 80.4
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.8e-39 167.5 99 79.8
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.2e-37 160.6 181 50.3
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.9e-37 160.2 181 50.3
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 3.9e-34 149.8 89 79.8
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 1.9e-33 147.5 82 84.1
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 7.3e-25 119.0 66 78.8
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 7.6e-22 109.0 144 47.2
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 7.1e-20 102.4 57 84.2
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.5e-19 100.1 85 64.7
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 3.1e-15 87.0 60 70.0
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.0e-15 85.5 88 56.8
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 2.7e-11 73.9 41 82.9
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 2.3e-10 70.9 45 75.6
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 1.1e-09 68.6 81 44.4
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.2e-06 58.5 41 65.9
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.2e-06 58.5 42 66.7


User provided reference genes

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