Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 1.4e-204 716.1 364 100.0
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 4.5e-171 604.7 362 83.7
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 2.7e-163 578.9 364 78.6
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 1.3e-162 576.6 364 78.6
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 4.7e-160 568.2 364 77.5
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 1.0e-159 567.0 364 78.0
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 1.0e-159 567.0 362 76.2
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 4.0e-159 565.1 362 77.3
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 4.0e-159 565.1 364 77.7
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 5.2e-159 564.7 364 76.9
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 4.4e-158 561.6 364 76.6
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 5.7e-158 561.2 364 75.5
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 5.7e-158 561.2 364 76.6
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 5.7e-158 561.2 363 76.0
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 7.5e-158 560.8 364 76.1
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 1.3e-157 560.1 361 75.9
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 1.1e-156 557.0 364 75.3
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 1.8e-156 556.2 364 76.4
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.6e-155 553.1 364 75.5
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 2.0e-155 552.7 362 74.6
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 7.7e-155 550.8 365 75.6
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 3.8e-154 548.5 361 73.7
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 1.5e-153 546.6 367 73.0
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 1.9e-153 546.2 364 74.5
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 1.6e-152 543.1 366 73.8
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 1.4e-151 540.0 362 73.2
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.3e-151 539.3 368 72.8
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.3e-151 539.3 368 72.8
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 6.8e-151 537.7 367 73.6
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 1.2e-150 537.0 355 72.7
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 3.4e-150 535.4 381 71.4
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 4.4e-150 535.0 366 73.0
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 5.7e-150 534.6 366 73.0
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 3.7e-149 531.9 339 79.9
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 3.7e-149 531.9 355 72.1
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 4.9e-149 531.6 365 71.5
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 8.3e-149 530.8 367 73.0
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.8e-148 529.6 367 71.7
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 3.1e-148 528.9 369 71.3
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 7.0e-148 527.7 364 71.4
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 1.2e-147 526.9 364 71.4
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 1.7e-146 523.1 364 70.6
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 3.8e-146 521.9 342 74.3
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 5.0e-146 521.5 364 72.0
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 1.9e-145 519.6 361 68.4
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 2.5e-145 519.2 365 71.2
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 4.3e-145 518.5 357 72.8
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 9.5e-145 517.3 355 73.5
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 1.6e-144 516.5 351 71.5
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 1.6e-144 516.5 361 70.6
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 1.6e-144 516.5 381 68.8
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 2.8e-144 515.8 328 76.2
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 2.8e-144 515.8 348 74.4
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 6.1e-144 514.6 357 70.6
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 6.1e-144 514.6 340 75.6
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 1.0e-143 513.8 366 70.5
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 1.4e-143 513.5 357 70.6
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 1.8e-143 513.1 360 69.4
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 2.3e-143 512.7 355 70.7
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 3.1e-143 512.3 365 70.4
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 6.8e-143 511.1 363 69.4
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 6.8e-143 511.1 361 69.8
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 8.9e-143 510.8 360 68.6
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 1.5e-142 510.0 439 60.8
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 2.0e-142 509.6 357 70.0
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 5.8e-142 508.1 357 70.9
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 5.8e-142 508.1 360 70.0
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 7.5e-142 507.7 357 69.5
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 7.5e-142 507.7 364 69.8
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 9.8e-142 507.3 355 71.3
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 1.3e-141 506.9 367 70.6
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 1.1e-140 503.8 357 69.2
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 1.1e-140 503.8 357 69.2
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 1.9e-140 503.1 358 70.1
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 2.4e-140 502.7 360 68.6
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 5.4e-140 501.5 357 69.7
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 1.6e-139 500.0 364 67.3
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 4.6e-139 498.4 362 69.1
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 1.7e-138 496.5 314 77.4
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 2.3e-138 496.1 369 69.1
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 5.0e-138 495.0 361 69.0
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 8.6e-138 494.2 364 70.3
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.1e-137 493.8 357 68.1
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 7.3e-137 491.1 355 68.5
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 6.2e-136 488.0 369 66.1
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 8.0e-136 487.6 365 67.9
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 8.0e-136 487.6 365 67.4
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 3.1e-135 485.7 364 67.6
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 7.5e-134 481.1 339 71.1
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 9.8e-134 480.7 365 66.8
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 5.4e-132 474.9 324 71.0
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 9.2e-132 474.2 337 69.1
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 2.1e-131 473.0 423 58.9
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 2.1e-131 473.0 360 63.9
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 4.6e-131 471.9 358 63.4
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 5.1e-130 468.4 407 61.4
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 9.5e-129 464.2 361 63.4
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 2.6e-126 456.1 363 61.7
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 5.8e-126 454.9 289 77.9
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 2.2e-125 453.0 287 77.0
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 9.2e-124 447.6 312 69.9
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 2.1e-120 436.4 288 74.0
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 1.1e-119 434.1 274 78.1
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 1.7e-117 426.8 274 75.9
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 8.1e-112 407.9 303 71.3
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 3.8e-109 399.1 328 60.7
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 2.5e-105 386.3 363 55.9
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 1.4e-103 380.6 351 55.6
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 2.4e-103 379.8 328 62.2
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 2.9e-101 372.9 355 54.1
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 8.4e-101 371.3 258 72.9
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 1.0e-98 364.4 268 68.3
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.1e-95 354.4 268 68.3
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 2.4e-87 326.6 355 48.7
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 5.8e-86 322.0 312 52.2
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 5.7e-73 278.9 450 37.3
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 9.4e-68 261.5 361 45.7
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 6.1e-59 232.3 358 39.4
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 8.8e-58 228.4 361 39.9
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 3.3e-57 226.5 175 68.6
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-56 224.6 271 51.7
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.2e-51 208.0 240 52.5
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 1.5e-49 201.1 210 55.7
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 4.1e-47 193.0 180 60.6
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.0e-45 188.3 180 58.9
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 6.1e-43 179.1 244 47.5
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 4.5e-38 162.9 114 69.3
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 1.7e-24 117.9 126 52.4
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 1.6e-22 111.3 204 39.2
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 1.4e-18 98.2 70 68.6
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 1.5e-17 94.7 71 62.0
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 7.1e-15 85.9 49 81.6
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 4.7e-11 73.2 203 28.1
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 4.4e-09 66.6 35 85.7
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 2.2e-08 64.3 83 43.4


User provided reference genes

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