Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10015418m.g Citrus clementina HOM05D006699 ORTHO05D008399 9.2e-229 796.6 412 100.0
Dinv15443 Davidia involucrata HOM05D006699 ORTHO05D008399 3.5e-143 512.3 343 75.8
QL08p041638 Quercus lobata HOM05D006699 ORTHO05D008399 1.8e-139 500.0 342 75.4
Eucgr.A01914 Eucalyptus grandis HOM05D006699 ORTHO05D008399 3.0e-139 499.2 347 73.8
Thecc.01G150500 Theobroma cacao HOM05D006699 ORTHO05D008399 8.8e-139 497.7 346 74.0
QL08p041677 Quercus lobata HOM05D006699 ORTHO05D008399 1.5e-138 496.9 342 75.1
GSVIVG01020707001 Vitis vinifera HOM05D006699 ORTHO05D008399 5.7e-138 495.0 341 73.9
Cfa023335 Carpinus fangiana HOM05D006699 ORTHO05D008399 1.6e-135 486.9 342 72.8
COL.COLO4_33580 Corchorus olitorius HOM05D006699 ORTHO05D008399 2.6e-135 486.1 352 71.3
CiPaw.04G132200 Carya illinoinensis HOM05D006699 ORTHO05D008399 7.7e-135 484.6 342 72.8
PGR042G0843 Punica granatum HOM05D006699 ORTHO05D008399 7.7e-135 484.6 343 72.3
TWI59G0496 Tripterygium wilfordii HOM05D006699 ORTHO05D008399 5.0e-134 481.9 342 72.2
Gohir.A12G086400 Gossypium hirsutum HOM05D006699 ORTHO05D008399 1.9e-133 479.9 345 72.5
Haze_13371 Corylus avellana HOM05D006699 ORTHO05D008399 2.5e-133 479.6 342 71.3
Potri.014G142200 Populus trichocarpa HOM05D006699 ORTHO05D008399 3.2e-133 479.2 344 69.2
CSS0012388 Camellia sinensis var. sinensis HOM05D006699 ORTHO05D008399 7.2e-133 478.0 344 70.3
TAR626G0153 Trochodendron aralioides HOM05D006699 ORTHO05D008399 6.1e-132 474.9 371 67.1
Gorai.008G095400 Gossypium raimondii HOM05D006699 ORTHO05D008399 1.8e-131 473.4 345 71.3
Lj1A681T38 Lonicera japonica HOM05D006699 ORTHO05D008399 1.8e-131 473.4 343 70.0
Sp4g13510 Schrenkiella parvula HOM05D006699 ORTHO05D008399 6.8e-131 471.5 344 70.1
CANSAT64G2599 Cannabis sativa HOM05D006699 ORTHO05D008399 8.8e-131 471.1 341 69.2
MD17G1230900 Malus domestica HOM05D006699 ORTHO05D008399 8.8e-131 471.1 344 70.6
Prupe.3G118500 Prunus persica HOM05D006699 ORTHO05D008399 2.6e-130 469.5 344 70.9
Gohir.D12G085000 Gossypium hirsutum HOM05D006699 ORTHO05D008399 3.4e-130 469.2 345 71.0
MD09G1238000 Malus domestica HOM05D006699 ORTHO05D008399 5.7e-130 468.4 344 70.1
Thhalv10016897m.g Eutrema salsugineum HOM05D006699 ORTHO05D008399 2.8e-129 466.1 342 68.4
AT2G31040 Arabidopsis thaliana HOM05D006699 ORTHO05D008399 3.7e-129 465.7 349 68.2
AL4G26070 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 1.1e-128 464.2 353 67.7
AL4G26150 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 1.8e-128 463.4 353 67.7
C04p60180 Brassica napus HOM05D006699 ORTHO05D008399 1.8e-128 463.4 345 68.4
BolC4t27520H Brassica oleracea HOM05D006699 ORTHO05D008399 1.8e-128 463.4 345 68.4
Carub.0004s1225 Capsella rubella HOM05D006699 ORTHO05D008399 3.1e-128 462.6 349 67.9
BraA04t17899Z Brassica rapa HOM05D006699 ORTHO05D008399 7.0e-128 461.5 345 67.8
A04p23730 Brassica napus HOM05D006699 ORTHO05D008399 9.1e-128 461.1 345 67.5
arahy.Tifrunner.gnm1.ann1.0K2T49 Arachis hypogaea HOM05D006699 ORTHO05D008399 3.5e-127 459.1 343 68.8
RcHm_v2.0_Chr2g0129651 Rosa chinensis HOM05D006699 ORTHO05D008399 4.5e-127 458.8 345 69.9
ClCG02G017820 Citrullus lanatus HOM05D006699 ORTHO05D008399 7.7e-127 458.0 346 69.4
arahy.Tifrunner.gnm1.ann1.GAG0UF Arachis hypogaea HOM05D006699 ORTHO05D008399 1.0e-126 457.6 343 68.5
HanXRQChr17g0557951 Helianthus annuus HOM05D006699 ORTHO05D008399 1.7e-126 456.8 335 68.7
FvH4_6g27380 Fragaria vesca HOM05D006699 ORTHO05D008399 2.2e-126 456.4 348 69.8
AUR62039018 Chenopodium quinoa HOM05D006699 ORTHO05D008399 1.5e-125 453.8 354 67.5
Lj3g0015335 Lotus japonicus HOM05D006699 ORTHO05D008399 1.5e-125 453.8 343 67.1
Manes.02G091200 Manihot esculenta HOM05D006699 ORTHO05D008399 1.9e-125 453.4 345 70.4
CARHR124570 Cardamine hirsuta HOM05D006699 ORTHO05D008399 4.2e-125 452.2 341 67.4
CsaV3_6G018450 Cucumis sativus L. HOM05D006699 ORTHO05D008399 1.6e-124 450.3 342 67.8
Lsat_1_v5_gn_8_140640 Lactuca sativa HOM05D006699 ORTHO05D008399 2.1e-124 449.9 378 63.5
Rhsim06G0131200 Rhododendron simsii HOM05D006699 ORTHO05D008399 4.7e-124 448.7 310 71.3
MSTRG.15092 Avicennia marina HOM05D006699 ORTHO05D008399 8.0e-124 448.0 350 66.9
EL10Ac2g03349 Beta vulgaris HOM05D006699 ORTHO05D008399 5.2e-123 445.3 345 67.2
Psat7g165360 Pisum sativum HOM05D006699 ORTHO05D008399 6.8e-123 444.9 348 66.1
CDE10G1046 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 1.2e-122 444.1 324 67.6
ECA233G1148 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.3e-121 440.7 366 63.1
Sabra14G0107300 Salix brachista HOM05D006699 ORTHO05D008399 2.2e-121 439.9 363 64.7
Lalb_Chr01g0006001 Lupinus albus HOM05D006699 ORTHO05D008399 2.8e-121 439.5 366 64.5
FAN14G2123 Fragaria x ananassa HOM05D006699 ORTHO05D008399 3.7e-121 439.1 360 66.9
Medtr4g079850 Medicago truncatula HOM05D006699 ORTHO05D008399 4.9e-121 438.7 348 66.4
PGSC0003DMG400007857 Solanum tuberosum HOM05D006699 ORTHO05D008399 8.3e-121 438.0 345 67.8
Glyma.06G277600 Glycine max HOM05D006699 ORTHO05D008399 3.1e-120 436.0 343 65.9
Migut.M00261 Erythranthe guttata HOM05D006699 ORTHO05D008399 5.4e-120 435.3 345 65.5
VMungo1127G1340 Vigna mungo HOM05D006699 ORTHO05D008399 5.4e-120 435.3 343 65.6
Peaxi162Scf00384g00423 Petunia axillaris HOM05D006699 ORTHO05D008399 7.0e-120 434.9 338 68.0
Ca_18111_v3 Cicer arietinum L. HOM05D006699 ORTHO05D008399 1.2e-119 434.1 333 65.8
Phvul.011G130500 Phaseolus vulgaris HOM05D006699 ORTHO05D008399 1.2e-119 434.1 343 64.7
FAN09G4348 Fragaria x ananassa HOM05D006699 ORTHO05D008399 2.9e-118 429.5 379 63.9
Actinidia11153 Actinidia chinensis HOM05D006699 ORTHO05D008399 1.1e-117 427.6 349 65.3
CAN.G1049.6 Capsicum annuum HOM05D006699 ORTHO05D008399 1.1e-117 427.6 346 65.3
unitig_0.g2026 Utricularia gibba HOM05D006699 ORTHO05D008399 1.9e-117 426.8 356 62.4
SGA_v2.0_scaffold9G04816 Striga asiatica HOM05D006699 ORTHO05D008399 5.6e-117 425.2 337 65.0
PSO675G3944 Papaver somniferum HOM05D006699 ORTHO05D008399 8.0e-116 421.4 355 60.8
PSO229G0039 Papaver somniferum HOM05D006699 ORTHO05D008399 2.3e-115 419.9 355 60.6
Nitab4.5_0001095g0100 Nicotiana tabacum HOM05D006699 ORTHO05D008399 8.9e-115 417.9 345 65.5
ATR0602G053 Amborella trichopoda HOM05D006699 ORTHO05D008399 3.7e-113 412.5 320 66.6
DCAR_017060 Daucus carota HOM05D006699 ORTHO05D008399 3.2e-112 409.5 344 61.6
PGSC0003DMG400020443 Solanum tuberosum HOM05D006699 ORTHO05D008399 4.1e-112 409.1 348 65.2
Sopen12g006230 Solanum pennellii HOM05D006699 ORTHO05D008399 2.7e-111 406.4 302 69.9
Solyc12g010870.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 4.6e-111 405.6 337 65.6
Hund07812 Selenicereus undatus HOM05D006699 ORTHO05D008399 5.9e-111 405.2 352 61.1
Solyc07g055050.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 1.7e-110 403.7 348 64.1
Sopen07g027160 Solanum pennellii HOM05D006699 ORTHO05D008399 6.6e-110 401.7 348 64.4
Manes.01G133200 Manihot esculenta HOM05D006699 ORTHO05D008399 1.5e-109 400.6 279 74.9
Nitab4.5_0000537g0130 Nicotiana tabacum HOM05D006699 ORTHO05D008399 1.2e-108 397.5 350 63.7
Aa31LG1G7380 Aethionema arabicum HOM05D006699 ORTHO05D008399 1.4e-107 394.0 349 61.0
Sc06g0009080 Simmondsia chinensis HOM05D006699 ORTHO05D008399 8.9e-107 391.3 270 74.1
FAN02G3357 Fragaria x ananassa HOM05D006699 ORTHO05D008399 2.4e-104 383.3 308 68.2
Nitab4.5_0009754g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 3.3e-101 372.9 345 61.7
Os01g0673800 Oryza sativa ssp. japonica HOM05D006699 ORTHO05D008399 7.3e-101 371.7 363 55.6
Nitab4.5_0011277g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 2.1e-100 370.2 351 59.3
Lju1655A0G36 Lonicera japonica HOM05D006699 ORTHO05D008399 3.1e-99 366.3 407 51.6
Sed0000889 Sechium edule HOM05D006699 ORTHO05D008399 9.8e-98 361.3 282 68.4
Aqoxy1G02064 Aquilegia oxysepala HOM05D006699 ORTHO05D008399 1.2e-92 344.4 260 69.6
Sed0016519 Sechium edule HOM05D006699 ORTHO05D008399 4.7e-92 342.4 348 56.0
HPP92_009665 Vanilla planifolia HOM05D006699 ORTHO05D008399 4.9e-89 332.4 396 48.5
Peaxi162Scf00469g00217 Petunia axillaris HOM05D006699 ORTHO05D008399 1.9e-88 330.5 334 56.3
Oeu018752.1 Olea europaea HOM05D006699 ORTHO05D008399 1.2e-87 327.8 238 71.4
Eucgr.K01127 Eucalyptus grandis HOM05D006699 ORTHO05D008399 1.6e-87 327.4 339 55.5
TPR.G28306 Trifolium pratense HOM05D006699 ORTHO05D008399 1.3e-86 324.3 282 62.1
Cc05_g08340 Coffea canephora HOM05D006699 ORTHO05D008399 2.3e-86 323.6 252 67.9
MELO3C013567.2 Cucumis melo HOM05D006699 ORTHO05D008399 2.5e-85 320.1 233 70.8
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 3.3e-85 319.7 233 72.1
Atru.chr6.2796 Acer truncatum HOM05D006699 ORTHO05D008399 1.9e-77 293.9 184 77.2
Mapoly0038s0046 Marchantia polymorpha HOM05D006699 ORTHO05D008399 2.4e-75 287.0 348 48.3
vmacro12376 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 2.4e-75 287.0 335 48.4
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 1.3e-73 281.2 181 74.6
Pp3c8_13580 Physcomitrium patens HOM05D006699 ORTHO05D008399 1.3e-73 281.2 349 47.6
Cpa.g.sc52.174 Carica papaya HOM05D006699 ORTHO05D008399 2.8e-68 263.5 188 71.3
AagrBONN_evm.TU.Sc2ySwM_228.3020 Anthoceros agrestis HOM05D006699 ORTHO05D008399 4.6e-63 246.1 274 49.3
SEGI_23271 Sequoiadendron giganteum HOM05D006699 ORTHO05D008399 2.8e-60 236.9 263 49.8
SMO014G0045 Selaginella moellendorffii HOM05D006699 ORTHO05D008399 5.3e-59 232.6 321 43.9
Zm00001eb360100 Zea mays HOM05D006699 ORTHO05D008399 7.9e-55 218.8 249 51.8
Cc05_g08350 Coffea canephora HOM05D006699 ORTHO05D008399 9.7e-37 158.7 96 80.2
Ah.01g003520 Amaranthus hybridus HOM05D006699 ORTHO05D008399 2.5e-32 144.1 101 66.3
vmacro12375 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 1.3e-28 131.7 88 70.5
Atru.chr6.2795 Acer truncatum HOM05D006699 ORTHO05D008399 9.1e-27 125.6 81 74.1
Cre01.g049600 Chlamydomonas reinhardtii HOM05D006699 ORTHO05D008399 1.5e-24 118.2 287 32.1
BraA03t11005Z Brassica rapa HOM05D006699 ORTHO05D008399 3.2e-24 117.1 89 65.2
A03p17330 Brassica napus HOM05D006699 ORTHO05D008399 2.1e-23 114.4 89 65.2
PRCOL_00001453 Prasinoderma coloniale HOM05D006699 ORTHO05D008399 7.5e-21 105.9 259 32.8
CDE10G0215 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 7.0e-19 99.4 60 80.0
Lsat_1_v5_gn_2_38761 Lactuca sativa HOM05D006699 ORTHO05D008399 3.8e-17 93.6 78 60.3
MCO04G044 Micromonas commoda HOM05D006699 ORTHO05D008399 2.5e-16 90.9 241 32.0
C03p20440 Brassica napus HOM05D006699 ORTHO05D042655 7.0e-11 72.8 54 66.7
BolC3t14422H Brassica oleracea HOM05D006699 ORTHO05D042655 7.0e-11 72.8 54 66.7
TPR.G33085 Trifolium pratense HOM05D006699 ORTHO05D008399 1.0e-09 68.9 46 67.4


User provided reference genes

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