Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 1.6e-228 795.8 412 100.0
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 1.6e-140 503.4 416 66.1
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 4.9e-121 438.7 421 58.9
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 4.9e-121 438.7 423 58.9
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 1.1e-120 437.6 424 59.4
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 1.8e-120 436.8 427 57.8
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 3.8e-118 429.1 418 56.2
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 1.5e-117 427.2 429 57.3
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 1.6e-116 423.7 430 56.3
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 1.6e-116 423.7 426 57.5
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 4.7e-116 422.2 413 57.4
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 8.0e-116 421.4 425 56.7
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 1.0e-115 421.0 423 56.3
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 2.2e-113 413.3 420 57.1
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 4.9e-113 412.1 420 56.9
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 5.4e-112 408.7 366 60.1
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 1.2e-111 407.5 421 56.8
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 4.6e-111 405.6 430 54.4
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 4.6e-111 405.6 430 54.4
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 3.1e-107 392.9 418 55.7
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 5.2e-107 392.1 425 53.9
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 1.5e-106 390.6 433 53.8
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 5.8e-106 388.7 425 50.8
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 1.3e-105 387.5 392 55.1
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 3.7e-105 386.0 382 56.3
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 1.4e-104 384.0 415 51.3
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 3.5e-103 379.4 396 54.0
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 4.6e-103 379.0 434 51.6
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 7.8e-103 378.3 388 53.9
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 1.0e-102 377.9 402 52.7
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.7e-102 377.1 421 53.4
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.9e-102 375.9 421 53.2
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 1.1e-101 374.4 373 57.6
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 1.5e-101 374.0 427 52.5
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 4.3e-101 372.5 389 53.2
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 4.3e-101 372.5 421 53.9
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 4.3e-101 372.5 421 53.2
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 7.3e-101 371.7 389 53.0
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 7.3e-101 371.7 369 56.4
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 1.6e-100 370.5 372 55.6
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 4.7e-100 369.0 416 50.7
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 6.2e-100 368.6 322 59.9
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 6.2e-100 368.6 417 52.5
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 1.1e-99 367.9 405 52.1
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 1.2e-98 364.4 365 54.2
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 2.0e-98 363.6 421 48.9
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 2.0e-98 363.6 421 53.2
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 2.0e-98 363.6 377 53.8
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 1.3e-97 360.9 423 51.5
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 2.9e-97 359.8 369 52.8
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 1.4e-96 357.5 380 53.9
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 5.4e-96 355.5 423 50.1
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 3.0e-94 349.7 405 50.4
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 3.9e-94 349.4 423 49.2
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 2.5e-93 346.7 421 50.1
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 1.2e-92 344.4 418 46.2
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 1.2e-92 344.4 409 50.1
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 1.2e-92 344.4 336 57.1
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 2.1e-92 343.6 409 51.1
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 6.2e-92 342.0 409 50.1
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 6.2e-92 342.0 376 52.1
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 1.8e-91 340.5 425 48.9
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 3.1e-91 339.7 406 50.7
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 3.1e-91 339.7 376 51.3
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 1.2e-90 337.8 406 50.2
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 1.2e-90 337.8 406 50.2
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 2.6e-90 336.7 423 47.0
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 1.3e-89 334.3 328 55.2
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 3.7e-89 332.8 404 49.8
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 1.4e-88 330.9 376 48.9
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 1.4e-88 330.9 408 46.3
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 1.9e-88 330.5 424 47.2
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 7.1e-88 328.6 382 49.7
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 1.2e-87 327.8 422 47.4
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 1.6e-87 327.4 427 46.1
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 3.0e-86 323.2 427 46.1
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 3.3e-85 319.7 429 46.4
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 2.1e-84 317.0 415 48.4
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 4.0e-83 312.8 331 52.0
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 2.6e-82 310.1 427 44.3
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 1.3e-81 307.8 348 52.6
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 4.9e-81 305.8 369 47.4
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 1.3e-78 297.7 360 48.3
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 1.3e-78 297.7 369 46.3
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 1.1e-77 294.7 378 48.7
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 7.3e-77 292.0 421 43.9
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 3.6e-76 289.7 401 46.6
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 1.4e-75 287.7 403 45.2
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 1.6e-71 274.2 316 51.6
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 2.7e-71 273.5 299 52.8
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 4.6e-71 272.7 300 53.0
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 9.3e-64 248.4 436 41.1
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 4.6e-63 246.1 398 41.7
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 1.8e-62 244.2 264 49.6
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 4.3e-61 239.6 249 55.8
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 1.3e-57 228.0 390 40.5
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 4.9e-57 226.1 363 41.3
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 4.9e-57 226.1 380 41.3
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 6.5e-57 225.7 245 53.1
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 6.5e-57 225.7 245 53.1
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 7.2e-48 195.7 228 49.1
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 5.7e-45 186.0 275 43.6
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 9.4e-40 168.7 338 36.1
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 8.8e-38 162.2 187 50.8
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.8e-36 157.1 126 64.3
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.8e-36 157.1 126 64.3
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 3.4e-34 150.2 236 42.8
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.1e-29 135.2 115 60.0
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 4.4e-29 133.3 159 52.2
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 2.4e-27 127.5 179 45.3
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 5.3e-27 126.3 403 29.5
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 2.2e-25 120.9 226 40.7
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 5.5e-24 116.3 314 32.2
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 2.0e-21 107.8 128 46.9
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 4.1e-19 100.1 347 28.2
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.9e-16 91.3 135 44.4
MCO10G213 Micromonas commoda HOM05D006726 ORTHO05D008328 8.5e-09 65.9 313 23.0


User provided reference genes

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