Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10014280m.g Citrus clementina HOM05D004735 ORTHO05D005243 0.0e+00 1455.3 826 100.0
Atru.chr6.2700 Acer truncatum HOM05D004735 ORTHO05D005243 1.2e-230 803.9 820 61.8
Thecc.04G048500 Theobroma cacao HOM05D004735 ORTHO05D005243 2.0e-214 750.0 806 52.1
Cfa007143 Carpinus fangiana HOM05D004735 ORTHO05D005243 6.4e-205 718.4 803 53.4
Duzib147G0188 Durio zibethinus HOM05D004735 ORTHO05D005243 1.5e-201 707.2 807 49.9
Haze_14980 Corylus avellana HOM05D004735 ORTHO05D005243 1.8e-199 700.3 837 50.7
Duzib264G0086 Durio zibethinus HOM05D004735 ORTHO05D005243 1.8e-199 700.3 804 49.6
CiPaw.03G001400 Carya illinoinensis HOM05D004735 ORTHO05D005243 1.3e-197 694.1 833 47.9
Prupe.3G314000 Prunus persica HOM05D004735 ORTHO05D005243 2.2e-197 693.3 803 52.6
QL02p069299 Quercus lobata HOM05D004735 ORTHO05D005243 6.4e-197 691.8 835 57.2
Duzib187G1028 Durio zibethinus HOM05D004735 ORTHO05D005243 6.8e-191 671.8 806 48.0
Gorai.007G073000 Gossypium raimondii HOM05D004735 ORTHO05D005243 1.0e-186 657.9 804 47.3
Gohir.D11G068200 Gossypium hirsutum HOM05D004735 ORTHO05D005243 8.6e-186 654.8 804 47.0
Manes.04G093600 Manihot esculenta HOM05D004735 ORTHO05D005243 1.5e-185 654.1 823 51.9
RcHm_v2.0_Chr2g0176561 Rosa chinensis HOM05D004735 ORTHO05D005243 1.2e-184 651.0 809 48.0
Manes.11G076100 Manihot esculenta HOM05D004735 ORTHO05D005243 3.6e-184 649.4 821 52.0
Potri.014G144100 Populus trichocarpa HOM05D004735 ORTHO05D005243 2.6e-182 643.3 820 49.0
MD17G1006400 Malus domestica HOM05D004735 ORTHO05D005243 1.0e-178 631.3 801 49.3
TWI32G0607 Tripterygium wilfordii HOM05D004735 ORTHO05D005243 5.1e-178 629.0 808 45.4
Potri.002G237800 Populus trichocarpa HOM05D004735 ORTHO05D005243 4.7e-176 622.5 849 44.6
CiPaw.04G001000 Carya illinoinensis HOM05D004735 ORTHO05D005243 1.4e-175 620.9 810 46.3
Sabra02G0181300 Salix brachista HOM05D004735 ORTHO05D005243 2.4e-175 620.2 833 44.8
Sabra14G0108800 Salix brachista HOM05D004735 ORTHO05D005243 3.8e-173 612.8 823 46.5
Cpa.g.sc70.59 Carica papaya HOM05D004735 ORTHO05D005243 1.4e-172 610.9 843 48.4
MD09G1002200 Malus domestica HOM05D004735 ORTHO05D005243 9.3e-172 608.2 805 48.2
Gohir.D10G081300 Gossypium hirsutum HOM05D004735 ORTHO05D005243 1.3e-170 604.4 812 44.8
Gorai.011G088500 Gossypium raimondii HOM05D004735 ORTHO05D005243 3.9e-170 602.8 812 44.7
FAN02G4354 Fragaria x ananassa HOM05D004735 ORTHO05D005243 1.1e-167 594.7 809 44.9
Gohir.A10G069900 Gossypium hirsutum HOM05D004735 ORTHO05D005243 9.0e-167 591.7 812 44.5
Dinv25616 Davidia involucrata HOM05D004735 ORTHO05D005243 1.5e-166 590.9 815 47.4
TWI60G1686 Tripterygium wilfordii HOM05D004735 ORTHO05D005243 2.6e-166 590.1 804 44.3
FAN09G0836 Fragaria x ananassa HOM05D004735 ORTHO05D005243 9.9e-166 588.2 809 45.0
CANSAT64G0702 Cannabis sativa HOM05D004735 ORTHO05D005243 1.7e-165 587.4 835 44.4
FAN05G2416 Fragaria x ananassa HOM05D004735 ORTHO05D005243 1.1e-164 584.7 809 44.6
VMungo0464G0888 Vigna mungo HOM05D004735 ORTHO05D005243 1.9e-164 583.9 874 46.6
COL.COLO4_13380 Corchorus olitorius HOM05D004735 ORTHO05D005243 2.4e-164 583.6 713 49.8
FvH4_6g54340 Fragaria vesca HOM05D004735 ORTHO05D005243 5.4e-164 582.4 809 44.7
FAN14G4878 Fragaria x ananassa HOM05D004735 ORTHO05D005243 1.6e-163 580.9 809 44.7
Glyma.16G147800 Glycine max HOM05D004735 ORTHO05D005243 8.4e-157 558.5 866 45.8
Lj1g0021966 Lotus japonicus HOM05D004735 ORTHO05D005243 2.7e-155 553.5 810 42.0
Glyma.02G066700 Glycine max HOM05D004735 ORTHO05D005243 1.3e-149 534.6 830 49.6
Ca_16589_v3 Cicer arietinum L. HOM05D004735 ORTHO05D005243 2.5e-148 530.4 829 44.3
Lj2g0010549 Lotus japonicus HOM05D004735 ORTHO05D005243 4.2e-148 529.6 825 42.9
Phvul.004G069600 Phaseolus vulgaris HOM05D004735 ORTHO05D005243 5.5e-148 529.3 893 43.6
arahy.Tifrunner.gnm1.ann1.X964XN Arachis hypogaea HOM05D004735 ORTHO05D005243 2.7e-147 526.9 831 43.9
CSS0022550 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 6.1e-147 525.8 816 46.9
Actinidia37716 Actinidia chinensis HOM05D004735 ORTHO05D005243 1.0e-146 525.0 820 42.1
Medtr7g084170 Medicago truncatula HOM05D004735 ORTHO05D005243 1.9e-145 520.8 847 38.4
Eucgr.G01927 Eucalyptus grandis HOM05D004735 ORTHO05D005243 5.7e-145 519.2 838 42.6
Hma1.2p1_0421F.1_g149860 Hydrangea macrophylla HOM05D004735 ORTHO05D005243 2.2e-144 517.3 816 45.6
Lalb_Chr21g0316971 Lupinus albus HOM05D004735 ORTHO05D005243 4.8e-144 516.2 866 42.7
arahy.Tifrunner.gnm1.ann1.HAHJ6R Arachis hypogaea HOM05D004735 ORTHO05D005243 3.1e-143 513.5 854 43.4
Medtr6g033235 Medicago truncatula HOM05D004735 ORTHO05D005243 1.1e-137 495.0 826 43.8
Lalb_Chr02g0156851 Lupinus albus HOM05D004735 ORTHO05D005243 2.4e-135 487.3 878 42.5
Gohir.A11G063900 Gossypium hirsutum HOM05D004735 ORTHO05D005243 6.9e-135 485.7 678 43.5
GSVIVG01032979001 Vitis vinifera HOM05D004735 ORTHO05D005243 3.2e-132 476.9 680 43.7
Psat3g093080 Pisum sativum HOM05D004735 ORTHO05D005243 1.2e-131 474.9 912 35.3
vmacro18383 Vaccinium macrocarpon HOM05D004735 ORTHO05D005243 1.7e-128 464.5 811 39.3
Psat0s787g0080 Pisum sativum HOM05D004735 ORTHO05D005243 4.8e-128 463.0 772 43.4
TPR.G15417 Trifolium pratense HOM05D004735 ORTHO05D005243 9.1e-127 458.8 896 35.7
Nn4g22117 Nelumbo nucifera HOM05D004735 ORTHO05D005243 6.1e-123 446.0 829 37.4
Gohir.A11G063833 Gossypium hirsutum HOM05D004735 ORTHO05D005243 4.4e-121 439.9 580 44.8
THA.LOC104802362 Tarenaya hassleriana HOM05D004735 ORTHO05D005243 1.3e-117 428.3 870 34.6
Ca_08203_v3 Cicer arietinum L. HOM05D004735 ORTHO05D005243 5.5e-116 422.9 802 35.4
TAR629G0422 Trochodendron aralioides HOM05D004735 ORTHO05D005243 1.5e-113 414.8 832 36.5
Rhsim08G0038800 Rhododendron simsii HOM05D004735 ORTHO05D005243 1.3e-112 411.8 766 38.6
Hund12196 Selenicereus undatus HOM05D004735 ORTHO05D005243 2.8e-112 410.6 809 39.9
SalBow4G2972 Salvia bowleyana HOM05D004735 ORTHO05D005243 2.5e-108 397.5 820 41.8
Lalb_Chr22g0359831 Lupinus albus HOM05D004735 ORTHO05D005243 2.1e-107 394.4 666 37.7
CsaV3_5G024940 Cucumis sativus L. HOM05D004735 ORTHO05D005243 8.8e-106 389.0 837 38.8
EL10Ac3g06356 Beta vulgaris HOM05D004735 ORTHO05D005243 1.5e-105 388.3 857 39.1
Lj7A617T74 Lonicera japonica HOM05D004735 ORTHO05D005243 2.4e-103 380.9 741 38.3
Oeu035383.1 Olea europaea HOM05D004735 ORTHO05D005243 4.5e-102 376.7 818 34.6
Sp6g30050 Schrenkiella parvula HOM05D004735 ORTHO05D005243 5.9e-102 376.3 847 34.0
Aa31LG11G15430 Aethionema arabicum HOM05D004735 ORTHO05D005243 6.6e-101 372.9 853 33.2
Nitab4.5_0002172g0170 Nicotiana tabacum HOM05D004735 ORTHO05D005243 6.1e-99 366.3 841 39.0
Carub.0006s1214 Capsella rubella HOM05D004735 ORTHO05D005243 8.0e-99 365.9 840 32.1
Thhalv10012594m.g Eutrema salsugineum HOM05D004735 ORTHO05D005243 1.0e-98 365.5 846 33.7
AT5G13950 Arabidopsis thaliana HOM05D004735 ORTHO05D005243 4.4e-97 360.1 849 32.5
BolC9t59152H Brassica oleracea HOM05D004735 ORTHO05D005243 5.7e-97 359.8 833 32.5
THA.LOC104821139 Tarenaya hassleriana HOM05D004735 ORTHO05D005243 1.3e-96 358.6 887 31.7
Nitab4.5_0000519g0300 Nicotiana tabacum HOM05D004735 ORTHO05D005243 1.7e-96 358.2 893 36.1
MELO3C005100.2 Cucumis melo HOM05D004735 ORTHO05D005243 3.7e-96 357.1 817 37.6
C09p63170 Brassica napus HOM05D004735 ORTHO05D005243 5.4e-95 353.2 838 32.6
Sc03g0005270 Simmondsia chinensis HOM05D004735 ORTHO05D005243 1.6e-94 351.7 836 36.8
Migut.F00010 Erythranthe guttata HOM05D004735 ORTHO05D005243 2.0e-94 351.3 824 32.9
A10p24440 Brassica napus HOM05D004735 ORTHO05D005243 5.9e-94 349.7 835 32.1
Dinv33275 Davidia involucrata HOM05D004735 ORTHO05D005243 7.8e-94 349.4 590 45.1
Sed0022562 Sechium edule HOM05D004735 ORTHO05D005243 2.3e-93 347.8 847 33.9
AUR62038220 Chenopodium quinoa HOM05D004735 ORTHO05D005243 5.0e-93 346.7 906 38.6
AL6G24610 Arabidopsis lyrata HOM05D004735 ORTHO05D005243 8.6e-93 345.9 853 31.8
Sopen02g039210 Solanum pennellii HOM05D004735 ORTHO05D005243 1.5e-92 345.1 891 32.5
CARHR199450 Cardamine hirsuta HOM05D004735 ORTHO05D005243 2.1e-91 341.3 871 30.9
DCAR_014465 Daucus carota HOM05D004735 ORTHO05D005243 3.6e-91 340.5 817 34.1
CAN.G473.160 Capsicum annuum HOM05D004735 ORTHO05D005243 1.0e-90 339.0 899 31.8
AUR62030086 Chenopodium quinoa HOM05D004735 ORTHO05D005243 4.0e-90 337.0 942 34.5
ClCG01G007860 Citrullus lanatus HOM05D004735 ORTHO05D005243 6.8e-90 336.3 839 32.8
MSTRG.24121 Avicennia marina HOM05D004735 ORTHO05D005243 3.4e-89 334.0 822 32.7
TPR.G30897 Trifolium pratense HOM05D004735 ORTHO05D005243 2.2e-88 331.3 832 36.8
C03p07280 Brassica napus HOM05D004735 ORTHO05D005243 1.9e-84 318.2 838 31.6
BolC3t13230H Brassica oleracea HOM05D004735 ORTHO05D005243 5.6e-84 316.6 838 31.4
Ah.13g074210 Amaranthus hybridus HOM05D004735 ORTHO05D005243 2.8e-83 314.3 882 35.7
PGR042G1405 Punica granatum HOM05D004735 ORTHO05D005243 9.2e-79 299.3 839 34.6
Solyc02g094540.4 Solanum lycopersicum HOM05D004735 ORTHO05D005243 4.6e-78 297.0 785 32.1
Peaxi162Scf00420g00844 Petunia axillaris HOM05D004735 ORTHO05D005243 2.3e-77 294.7 806 36.8
Oeu035273.1 Olea europaea HOM05D004735 ORTHO05D005243 3.3e-76 290.8 842 29.8
Ah.07g203970 Amaranthus hybridus HOM05D004735 ORTHO05D005243 2.8e-75 287.7 817 32.9
Cc07_g01350 Coffea canephora HOM05D004735 ORTHO05D005243 6.0e-70 270.0 549 34.6
TAR371G0169 Trochodendron aralioides HOM05D004735 ORTHO05D008917 7.8e-70 269.6 269 56.5
PSO017G6705 Papaver somniferum HOM05D004735 ORTHO05D005243 8.6e-69 266.2 862 29.7
MBI07_g13942_MAGBIO Magnolia biondii HOM05D004735 ORTHO05D005243 1.2e-67 262.3 832 29.9
PGSC0003DMG400020237 Solanum tuberosum HOM05D004735 ORTHO05D005243 1.2e-67 262.3 371 40.2
PSO478G1205 Papaver somniferum HOM05D004735 ORTHO05D005243 8.1e-67 259.6 862 28.8
BcaB01g05325 Brassica carinata HOM05D004735 ORTHO05D005243 4.4e-65 253.8 832 29.1
SGA_v2.0_scaffold423G51443 Striga asiatica HOM05D004735 ORTHO05D005243 1.3e-64 252.3 792 30.9
BraA10t44508Z Brassica rapa HOM05D000139 ORTHO05D005243 1.6e-62 245.4 703 29.7
Lsat_1_v5_gn_3_104900 Lactuca sativa HOM05D004735 ORTHO05D005243 2.1e-62 245.0 828 30.8
HanXRQChr15g0475721 Helianthus annuus HOM05D004735 ORTHO05D005243 3.5e-54 217.6 808 28.5
HanXRQChr17g0550891 Helianthus annuus HOM05D004735 ORTHO05D005243 2.6e-49 201.4 270 45.9
ECA246G4565 Erigeron canadensis HOM05D004735 ORTHO05D005243 1.6e-43 182.2 291 42.6
Dinv33274 Davidia involucrata HOM05D004735 ORTHO05D005243 2.9e-40 171.4 167 50.3
BcaC04g19065 Brassica carinata HOM05D004735 ORTHO05D005243 5.7e-36 157.1 397 30.2
Cc07_g01360 Coffea canephora HOM05D004735 ORTHO05D005243 2.1e-35 155.2 200 40.0
ATR0582G141 Amborella trichopoda HOM05D004735 ORTHO05D005243 5.8e-33 147.1 281 37.0
CDE06G2773 Ceratophyllum demersum HOM05D004735 ORTHO05D005243 2.9e-32 144.8 270 33.7
TPR.G28482 Trifolium pratense HOM05D004735 ORTHO05D005243 3.1e-26 124.8 106 63.2
CDE02G2610 Ceratophyllum demersum HOM05D004735 ORTHO05D005243 7.7e-25 120.2 249 33.3
BolC2t06598H Brassica oleracea HOM05D000139 ORTHO05D000103 2.2e-24 118.6 101 59.4
C02p06510 Brassica napus HOM05D000139 ORTHO05D000103 8.5e-24 116.7 101 58.4
Psat7g164720 Pisum sativum HOM05D000121 ORTHO05D000102 1.6e-22 112.5 96 60.4
Zm00001eb307010 Zea mays HOM05D004735 ORTHO05D005243 2.1e-22 112.1 267 30.7
Gohir.A11G063866 Gossypium hirsutum HOM05D004735 ORTHO05D005243 1.0e-21 109.8 67 70.1
Actinidia19551 Actinidia chinensis HOM05D004735 ORTHO05D005243 3.9e-21 107.8 93 53.8
CSS0011678 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 5.1e-21 107.5 145 42.8
A03p06300 Brassica napus HOM05D004735 ORTHO05D005243 1.1e-20 106.3 231 34.6
BraA03t09961Z Brassica rapa HOM05D004735 ORTHO05D005243 1.1e-20 106.3 231 34.6
unitig_0.g1642 Utricularia gibba HOM05D004735 ORTHO05D005243 3.3e-20 104.8 526 24.9
CSS0009912 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 2.0e-17 95.5 96 50.0
CSS0050200 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 2.5e-15 88.6 67 58.2
Lalb_Chr22g0359841 Lupinus albus HOM05D004735 ORTHO05D005243 2.5e-15 88.6 67 58.2
CSS0009135 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 9.4e-15 86.7 67 58.2
CSS0035487 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 2.7e-14 85.1 66 57.6
SEGI_21903 Sequoiadendron giganteum HOM05D004735 ORTHO05D005243 9.7e-12 76.6 62 53.2
Peaxi162Scf00420g00843 Petunia axillaris HOM05D004735 ORTHO05D005243 2.8e-11 75.1 64 51.6
Solyc02g094530.1 Solanum lycopersicum HOM05D004735 ORTHO05D005243 2.8e-11 75.1 66 50.0
SHI13679 Sapria himalayana HOM05D004735 ORTHO05D005243 5.0e-08 64.3 41 63.4


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