Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 0.0e+00 1597.4 828 100.0
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 0.0e+00 1192.2 828 75.2
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 0.0e+00 1087.0 820 68.4
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 0.0e+00 1081.6 831 68.2
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 2.8e-311 1071.6 830 67.7
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 4.3e-310 1067.8 830 67.2
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 4.0e-308 1061.2 816 68.6
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 2.6e-307 1058.5 816 68.6
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 1.3e-306 1056.2 832 66.8
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 4.9e-306 1054.3 832 66.3
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 6.4e-306 1053.9 815 68.3
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 7.1e-305 1050.4 815 67.1
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 4.6e-304 1047.7 826 67.2
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 6.0e-304 1047.3 833 67.0
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 1.3e-303 1046.2 832 65.7
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 3.9e-303 1044.6 832 65.5
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 4.3e-302 1041.2 829 65.5
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 3.4e-299 1031.6 833 64.7
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.4e-299 1031.6 833 64.6
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 8.7e-295 1016.9 825 65.1
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 1.9e-289 999.2 830 64.1
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 7.1e-289 997.3 793 65.7
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 2.4e-284 982.2 830 64.1
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 5.8e-283 977.6 822 63.6
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 1.3e-282 976.5 804 63.7
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.7e-280 968.8 801 64.3
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 4.6e-280 968.0 821 61.8
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 1.9e-273 946.0 812 62.8
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 2.7e-272 942.2 811 60.7
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 3.9e-271 938.3 800 60.8
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 1.5e-270 936.4 828 60.0
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 3.3e-270 935.3 809 61.7
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 1.4e-268 929.9 799 61.2
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 1.4e-268 929.9 831 58.8
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 6.9e-268 927.5 808 59.5
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 2.6e-267 925.6 807 61.1
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 4.5e-267 924.9 803 60.3
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 8.5e-266 920.6 831 58.4
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.1e-265 920.2 822 58.3
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 1.9e-265 919.5 833 58.2
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 5.5e-265 917.9 822 58.2
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 2.1e-264 916.0 823 58.4
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 1.9e-262 909.4 807 58.0
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 3.3e-262 908.7 831 57.9
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 1.1e-260 903.7 835 60.5
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 2.4e-260 902.5 807 57.7
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 4.1e-260 901.7 815 58.3
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 3.4e-259 898.7 828 58.5
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 5.9e-259 897.9 823 59.2
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 1.0e-258 897.1 797 59.5
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.4e-257 893.3 833 58.5
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 4.2e-257 891.7 821 56.8
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 4.7e-256 888.3 821 56.6
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 4.4e-254 881.7 796 56.9
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 3.2e-249 865.5 823 55.3
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 2.1e-248 862.8 801 56.9
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 4.7e-248 861.7 821 57.0
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 6.7e-247 857.8 823 57.2
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.1e-246 857.1 753 58.7
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 1.5e-246 856.7 823 57.5
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 2.8e-245 852.4 816 55.9
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 5.3e-244 848.2 828 54.8
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 1.6e-243 846.7 807 55.9
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 1.8e-239 833.2 802 57.1
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 3.0e-239 832.4 831 54.4
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 6.7e-239 831.2 814 55.0
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 3.3e-238 828.9 745 58.0
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 2.8e-237 825.9 818 55.3
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 1.2e-235 820.5 818 54.4
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.2e-235 820.5 741 58.2
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 1.6e-235 820.1 818 54.6
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 2.7e-235 819.3 831 54.6
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 2.2e-234 816.2 829 55.1
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 6.1e-232 808.1 804 55.0
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 5.2e-231 805.1 820 52.8
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 8.8e-231 804.3 818 53.7
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 2.0e-230 803.1 808 55.1
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 2.6e-230 802.7 802 54.7
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 9.8e-230 800.8 819 53.8
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 9.8e-230 800.8 806 55.2
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 3.7e-229 798.9 762 56.3
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 4.5e-227 792.0 840 52.9
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 2.5e-225 786.2 837 53.3
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 5.5e-225 785.0 655 63.5
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 1.2e-224 783.9 823 53.7
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 1.0e-223 780.8 615 67.3
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 1.3e-221 773.9 823 53.0
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 2.3e-215 753.1 847 49.7
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.3e-210 736.5 610 62.6
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 5.2e-207 725.3 797 51.6
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 5.4e-196 688.7 822 46.2
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 2.2e-181 640.2 744 51.5
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 2.1e-179 633.6 833 44.4
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.3e-176 624.4 558 61.3
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 6.9e-175 618.6 351 90.9
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 5.4e-172 609.0 792 44.3
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 2.5e-169 600.1 609 53.7
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 4.9e-165 585.9 486 63.6
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 8.4e-165 585.1 579 54.2
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 3.2e-156 556.6 315 91.4
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 2.1e-147 527.3 423 65.5
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 2.9e-141 506.9 809 39.7
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 7.9e-139 498.8 313 84.3
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 4.4e-137 493.0 524 51.7
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 8.8e-130 468.8 760 42.4
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.4e-103 381.7 490 51.0
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 3.0e-93 347.4 923 29.7
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 2.0e-89 334.7 860 30.5
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 2.1e-86 324.7 264 61.4
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.1e-76 292.4 217 69.1
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 4.9e-72 276.9 219 63.0
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 2.3e-69 268.1 831 29.4
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.9e-63 248.4 242 54.1
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 4.2e-63 247.3 361 39.9
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 4.0e-50 204.1 534 28.8
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 3.0e-45 188.0 582 29.6
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.5e-44 185.7 217 48.8
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 8.2e-27 126.7 275 37.1
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 1.3e-19 102.8 71 69.0
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 8.5e-16 90.1 453 23.6


User provided reference genes

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