Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 6.0e-74 280.8 145 100.0
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 1.3e-44 183.3 144 66.0
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 2.9e-44 182.2 137 65.7
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 1.1e-43 180.3 144 66.0
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 4.6e-42 174.9 147 63.9
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 6.0e-42 174.5 146 61.6
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 7.8e-42 174.1 146 62.3
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 1.0e-41 173.7 146 62.3
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 3.0e-41 172.2 146 61.6
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 6.2e-39 164.5 142 59.9
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 2.4e-38 162.5 142 61.3
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 5.8e-37 157.9 143 58.7
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 1.3e-36 156.8 142 53.5
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 2.9e-36 155.6 142 52.8
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 2.9e-36 155.6 152 57.2
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 2.9e-36 155.6 141 56.0
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 8.4e-36 154.1 149 56.4
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 5.4e-35 151.4 142 55.6
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 1.6e-34 149.8 152 52.6
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.7e-34 149.1 142 53.5
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.7e-34 149.1 142 53.5
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 3.5e-34 148.7 142 52.8
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 6.0e-34 147.9 151 50.3
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 6.0e-34 147.9 146 53.4
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 6.0e-34 147.9 145 52.4
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 7.9e-34 147.5 136 56.6
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 7.9e-34 147.5 136 56.6
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 7.9e-34 147.5 136 56.6
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 1.3e-33 146.7 141 50.4
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 1.3e-33 146.7 133 59.4
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 2.3e-33 146.0 151 51.7
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.3e-33 146.0 134 56.0
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 3.0e-33 145.6 146 52.7
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 5.1e-33 144.8 151 50.3
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 1.1e-32 143.7 146 51.4
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 1.9e-32 142.9 136 56.6
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 2.5e-32 142.5 125 56.0
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 2.5e-32 142.5 125 56.0
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 3.3e-32 142.1 139 55.4
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 7.4e-32 141.0 145 50.3
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 1.3e-31 140.2 150 50.0
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 2.1e-31 139.4 155 47.1
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 2.1e-31 139.4 142 50.7
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 2.8e-31 139.0 132 54.5
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 3.7e-31 138.7 137 51.1
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 2.4e-30 136.0 136 53.7
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 4.0e-30 135.2 102 68.6
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 4.0e-30 135.2 142 48.6
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 5.3e-30 134.8 151 47.0
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 5.3e-30 134.8 150 48.0
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 9.0e-30 134.0 152 48.7
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 9.0e-30 134.0 128 56.2
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 1.2e-29 133.7 152 48.7
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 1.5e-29 133.3 141 48.2
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 1.5e-29 133.3 135 54.8
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 2.6e-29 132.5 136 52.2
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 3.4e-29 132.1 142 47.9
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 4.5e-29 131.7 143 47.6
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 9.9e-29 130.6 157 45.9
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 1.3e-28 130.2 142 47.9
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 2.9e-28 129.0 157 45.2
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 2.9e-28 129.0 148 50.0
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 3.8e-28 128.6 146 46.6
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 8.4e-28 127.5 152 46.7
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 1.9e-27 126.3 152 46.1
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.6e-26 123.2 109 52.3
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 3.5e-26 122.1 132 49.2
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 1.0e-25 120.6 105 55.2
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 3.9e-25 118.6 133 46.6
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 5.1e-25 118.2 110 53.6
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 2.5e-24 115.9 154 42.2
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 4.3e-24 115.2 126 50.8
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 5.6e-24 114.8 151 40.4
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 5.6e-24 114.8 151 40.4
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 7.4e-24 114.4 158 43.0
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 1.6e-23 113.2 106 58.5
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 1.6e-23 113.2 145 44.8
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 8.2e-23 110.9 135 45.2
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 1.1e-22 110.5 132 42.4
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 1.4e-22 110.2 132 46.2
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 2.4e-22 109.4 128 43.8
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 3.1e-22 109.0 123 50.4
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 3.1e-22 109.0 123 44.7
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 4.0e-22 108.6 147 45.6
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 2.6e-21 105.9 73 68.5
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 1.0e-20 104.0 95 54.7
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 1.7e-20 103.2 104 49.0
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 8.4e-20 100.9 93 51.6
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 9.3e-19 97.4 117 43.6
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 9.3e-19 97.4 126 38.9
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 1.6e-18 96.7 101 55.4
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 2.1e-18 96.3 102 47.1
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 5.1e-17 91.7 144 40.3
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 1.1e-16 90.5 98 45.9
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 1.1e-16 90.5 133 37.6
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 3.3e-16 89.0 140 39.3
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 7.4e-16 87.8 103 43.7
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 7.4e-16 87.8 98 50.0
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 8.2e-15 84.3 142 36.6
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 1.8e-14 83.2 132 34.1
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 2.4e-14 82.8 121 38.8
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 6.9e-14 81.3 134 32.1
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 1.7e-12 76.6 100 40.0
AUR62015398 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.2e-10 70.5 64 46.9
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 2.7e-10 69.3 140 32.1
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 1.0e-09 67.4 113 35.4
AUR62040375 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.4e-09 67.0 63 44.4


User provided reference genes

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