Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 9.6e-68 260.0 128 100.0
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 1.7e-35 152.9 128 60.2
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 4.5e-33 144.8 128 57.8
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.0e-32 143.7 128 58.6
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 1.6e-30 136.3 128 53.1
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 3.0e-29 132.1 128 54.7
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 3.0e-29 132.1 128 52.3
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 3.0e-29 132.1 128 52.3
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 3.0e-29 132.1 128 52.3
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 6.7e-29 131.0 128 51.6
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 1.1e-28 130.2 120 57.5
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 2.0e-28 129.4 128 53.9
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.6e-28 129.0 128 51.6
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 2.6e-28 129.0 133 53.4
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 1.7e-27 126.3 113 61.1
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 2.8e-27 125.6 131 50.4
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 4.8e-27 124.8 130 51.5
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.8e-26 122.9 128 54.7
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 2.4e-26 122.5 125 53.6
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 9.1e-26 120.6 129 51.2
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.5e-25 119.8 128 50.8
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.0e-24 117.1 125 49.6
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 1.0e-24 117.1 132 50.8
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 1.3e-24 116.7 129 51.9
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.2e-24 115.9 129 50.4
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.2e-24 115.9 132 50.0
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 2.2e-24 115.9 132 50.0
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 2.9e-24 115.5 128 45.3
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 3.8e-24 115.2 110 51.8
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 5.0e-24 114.8 128 51.6
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 1.1e-23 113.6 127 46.5
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.5e-23 113.2 125 48.0
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.2e-22 110.2 129 44.2
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 1.6e-22 109.8 135 43.7
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 2.1e-22 109.4 121 46.3
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 2.7e-22 109.0 133 45.9
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 6.1e-22 107.8 128 46.9
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 6.1e-22 107.8 129 45.7
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 1.4e-21 106.7 135 48.1
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 1.4e-21 106.7 124 46.0
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 4.0e-21 105.1 131 48.1
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 5.2e-21 104.8 132 43.9
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 6.7e-21 104.4 131 43.5
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 1.5e-20 103.2 110 50.0
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 1.5e-20 103.2 96 59.4
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 2.0e-20 102.8 129 45.7
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 1.3e-19 100.1 127 45.7
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.4e-18 96.7 108 49.1
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 1.8e-18 96.3 95 51.6
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 2.4e-18 95.9 130 39.2
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 3.1e-18 95.5 101 52.5
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 5.3e-18 94.7 132 46.2
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 9.1e-18 94.0 110 43.6
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 9.1e-18 94.0 95 52.6
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 1.2e-17 93.6 125 44.8
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 1.6e-17 93.2 126 44.4
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 2.6e-17 92.4 89 50.6
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 4.5e-17 91.7 132 41.7
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 5.9e-17 91.3 98 48.0
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 5.9e-17 91.3 98 48.0
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 5.9e-17 91.3 127 43.3
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.3e-16 90.1 122 46.7
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.2e-16 89.4 114 45.6
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 2.9e-16 89.0 114 46.5
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 6.5e-16 87.8 107 43.9
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 8.5e-16 87.4 124 41.1
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 1.1e-15 87.0 105 55.2
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 1.5e-15 86.7 98 48.0
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 1.6e-14 83.2 52 67.3
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 6.1e-14 81.3 107 44.9
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 6.1e-14 81.3 107 44.9
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 1.8e-13 79.7 98 45.9
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 2.3e-13 79.3 87 46.0
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 2.3e-13 79.3 87 46.0
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 6.8e-13 77.8 97 41.2
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 2.0e-12 76.3 116 41.4
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 2.0e-12 76.3 128 35.9
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 5.7e-12 74.7 112 38.4
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 1.7e-11 73.2 123 40.7
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.2e-11 72.8 109 43.1
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 2.8e-11 72.4 98 39.8
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 2.8e-11 72.4 117 35.9
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 4.8e-11 71.6 86 47.7
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 8.3e-11 70.9 125 37.6
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 2.4e-10 69.3 107 38.3
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.4e-10 69.3 134 37.3
Solyc04g007585.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 4.1e-10 68.6 127 35.4
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 7.0e-10 67.8 92 42.4
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 1.6e-09 66.6 128 32.8
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 4.5e-09 65.1 95 42.1
HanXRQChr11g0325281 Helianthus annuus HOM05D007637 ORTHO05D009508 1.7e-08 63.2 127 35.4
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 1.7e-08 63.2 46 58.7
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 1.7e-08 63.2 78 51.3
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 1.7e-08 63.2 94 37.2
PGSC0003DMG400010395 Solanum tuberosum HOM05D007637 ORTHO05D009508 1.7e-08 63.2 122 40.2
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 3.6e-06 55.5 66 42.4


User provided reference genes

Program Settings