Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10013427m.g Citrus clementina HOM05D000003 ORTHO05D000167 5.0e-70 267.7 138 100.0
Ciclev10007098m.g Citrus clementina HOM05D000003 ORTHO05D000167 1.0e-30 137.1 107 64.5
Ciclev10010478m.g Citrus clementina HOM05D000003 ORTHO05D000167 3.0e-27 125.6 117 58.1
Ciclev10006508m.g Citrus clementina HOM05D000003 ORTHO05D000167 2.9e-25 119.0 102 60.8
Ciclev10027161m.g Citrus clementina HOM05D000003 ORTHO05D000167 6.1e-20 101.3 105 45.7
Ciclev10013872m.g Citrus clementina HOM05D000003 ORTHO05D000167 1.3e-14 83.6 105 37.1
Atru.chr3.1273 Acer truncatum HOM05D000003 ORTHO05D000167 4.9e-09 65.1 108 30.6
Atru.chr5.2963 Acer truncatum HOM05D000003 ORTHO05D000006 4.9e-09 65.1 108 37.0
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 8.3e-09 64.3 105 33.3
Atru.chr4.1036 Acer truncatum HOM05D000003 ORTHO05D000167 8.3e-09 64.3 108 31.5
Atru.chr13.2526 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-08 63.9 90 38.9
Atru.chr1.3769 Acer truncatum HOM05D000003 ORTHO05D000167 1.9e-08 63.2 113 31.0
Atru.chr10.544 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-08 62.0 110 31.8
CANSAT01G1919 Cannabis sativa HOM05D000003 ORTHO05D000167 4.1e-08 62.0 118 31.4
Atru.chr12.998 Acer truncatum HOM05D000003 ORTHO05D000167 5.4e-08 61.6 110 34.5
Atru.chr1.805 Acer truncatum HOM05D000003 ORTHO05D000167 7.1e-08 61.2 110 31.8
Atru.chr10.418 Acer truncatum HOM05D000003 ORTHO05D000004 7.1e-08 61.2 105 35.2
Atru.chr12.350 Acer truncatum HOM05D000003 ORTHO05D000167 7.1e-08 61.2 104 30.8
Atru.chr13.2597 Acer truncatum HOM05D000003 ORTHO05D000004 7.1e-08 61.2 109 31.2
Atru.chr2.2758 Acer truncatum HOM05D000003 ORTHO05D000167 9.2e-08 60.8 110 30.9
Atru.chr3.1768 Acer truncatum HOM05D000003 ORTHO05D000167 9.2e-08 60.8 112 35.7
Atru.chr10.1454 Acer truncatum HOM05D000003 ORTHO05D000167 1.2e-07 60.5 111 31.5
Atru.chr2.49 Acer truncatum HOM05D000003 ORTHO05D000167 1.2e-07 60.5 114 32.5
Atru.chr3.843 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-07 60.1 109 32.1
Atru.chr10.149 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-07 59.3 107 33.6
Atru.chr10.535 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-07 59.3 91 35.2
Atru.chr7.1503 Acer truncatum HOM05D000003 ORTHO05D000006 2.7e-07 59.3 111 33.3
Ciclev10027237m.g Citrus clementina HOM05D000003 ORTHO05D000167 2.7e-07 59.3 82 36.6
Prupe.8G099500 Prunus persica HOM05D000003 ORTHO05D000167 2.7e-07 59.3 119 26.1
QL05p012339 Quercus lobata HOM05D000003 ORTHO05D000167 2.7e-07 59.3 108 34.3
Atru.chr2.2201 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-07 58.9 107 32.7
Atru.chr4.85 Acer truncatum HOM05D000003 ORTHO05D000167 3.5e-07 58.9 113 31.9
Atru.chr6.242 Acer truncatum HOM05D000003 ORTHO05D000006 3.5e-07 58.9 111 38.7
Atru.chr6.714 Acer truncatum HOM05D041887 ORTHO05D000167 3.5e-07 58.9 111 32.4
Atru.chr6.748 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-07 58.9 104 34.6
Atru.chr11.1731 Acer truncatum HOM05D000003 ORTHO05D000167 4.6e-07 58.5 122 32.0
Atru.chr2.931 Acer truncatum HOM05D000003 ORTHO05D000004 6.0e-07 58.2 122 32.8
Atru.chr5.1667 Acer truncatum HOM05D000003 ORTHO05D000004 6.0e-07 58.2 109 30.3
Atru.chr1.3779 Acer truncatum HOM05D000003 ORTHO05D000167 7.8e-07 57.8 110 30.9
Atru.chr7.658 Acer truncatum HOM05D000003 ORTHO05D000004 7.8e-07 57.8 117 29.9
Atru.chr9.146 Acer truncatum HOM05D000003 ORTHO05D000167 7.8e-07 57.8 112 29.5
Atru.chr8.695 Acer truncatum HOM05D000003 ORTHO05D000167 1.0e-06 57.4 114 29.8
Atru.chr9.1174 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 57.4 108 28.7
AUR62034276 Chenopodium quinoa HOM05D000003 ORTHO05D000022 1.0e-06 57.4 115 27.0
Atru.chr12.1060 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-06 57.0 80 38.8
Atru.chr2.2135 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-06 57.0 108 28.7
Atru.chr2.677 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-06 57.0 96 32.3
Atru.chr5.2480 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-06 57.0 111 27.0
Atru.chr6.787 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-06 57.0 104 32.7
Atru.chr7.573 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-06 57.0 95 31.6
Atru.chr2.1558 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-06 56.6 121 30.6
Atru.chr9.679 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-06 56.6 112 27.7
Prupe.2G082600 Prunus persica HOM05D000003 ORTHO05D000167 1.7e-06 56.6 119 25.2
Atru.chr1.1585 Acer truncatum HOM05D000003 ORTHO05D000167 2.3e-06 56.2 117 28.2
Atru.chr12.2225 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 56.2 86 34.9
Atru.chr5.1598 Acer truncatum HOM05D000856 ORTHO05D000167 2.3e-06 56.2 87 39.1
Atru.chr6.1438 Acer truncatum HOM05D000003 ORTHO05D000167 2.3e-06 56.2 117 30.8
Atru.chr8.67 Acer truncatum HOM05D000003 ORTHO05D000167 2.3e-06 56.2 122 32.0
Actinidia31778 Actinidia chinensis HOM05D000155 ORTHO05D000022 2.3e-06 56.2 107 37.4
Ciclev10017268m.g Citrus clementina HOM05D000003 ORTHO05D000167 2.3e-06 56.2 60 38.3
Atru.chr1.3884 Acer truncatum HOM05D000003 ORTHO05D000167 3.0e-06 55.8 104 32.7
Atru.chr13.508 Acer truncatum HOM05D000003 ORTHO05D000167 3.0e-06 55.8 81 35.8
Atru.chr6.1886 Acer truncatum HOM05D000003 ORTHO05D000006 3.0e-06 55.8 109 30.3
Atru.chr6.706 Acer truncatum HOM05D041887 ORTHO05D000167 3.0e-06 55.8 116 31.0
Sed0016145 Sechium edule HOM05D000003 ORTHO05D000004 3.0e-06 55.8 95 31.6
Atru.chr1.2404 Acer truncatum HOM05D000003 ORTHO05D000004 3.9e-06 55.5 121 32.2
Atru.chr11.102 Acer truncatum HOM05D000003 ORTHO05D000167 3.9e-06 55.5 75 41.3
Atru.chr13.1818 Acer truncatum HOM05D000003 ORTHO05D000004 3.9e-06 55.5 109 31.2
Atru.chr4.3086 Acer truncatum HOM05D000003 ORTHO05D000167 3.9e-06 55.5 118 33.9
Ciclev10033504m.g Citrus clementina HOM05D000003 ORTHO05D000167 3.9e-06 55.5 85 36.5
Atru.chr13.2346 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-06 55.1 113 31.0
Atru.chr8.782 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-06 55.1 108 29.6
Atru.chr12.2338 Acer truncatum HOM05D000003 ORTHO05D000167 6.6e-06 54.7 107 29.9
Atru.chr9.643 Acer truncatum HOM05D000003 ORTHO05D000167 6.6e-06 54.7 109 30.3
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 6.6e-06 54.7 118 31.4
SEGI_16227 Sequoiadendron giganteum HOM05D000592 ORTHO05D000900 6.6e-06 54.7 87 40.2
Atru.chr11.145 Acer truncatum HOM05D000003 ORTHO05D000167 8.6e-06 54.3 112 30.4
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-06 54.3 105 27.6
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 8.6e-06 54.3 118 28.0
Atru.chr5.2789 Acer truncatum HOM05D000003 ORTHO05D000167 8.6e-06 54.3 105 28.6
Atru.chr6.1815 Acer truncatum HOM05D000003 ORTHO05D000167 8.6e-06 54.3 105 31.4
Atru.chr8.1143 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-06 54.3 104 29.8
QL02p081060 Quercus lobata HOM05D000003 ORTHO05D000167 8.6e-06 54.3 116 26.7


User provided reference genes

Program Settings