Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10013175m.g Citrus clementina HOM05D000926 ORTHO05D000707 5.5e-45 184.1 106 100.0
Potri.004G108800 Populus trichocarpa HOM05D000926 ORTHO05D000707 2.5e-13 79.0 100 43.0
Cfa007730 Carpinus fangiana HOM05D000926 ORTHO05D000707 3.3e-13 78.6 96 44.8
CiPaw.03G080200 Carya illinoinensis HOM05D000926 ORTHO05D000707 9.5e-13 77.0 104 46.2
Gohir.D07G082340 Gossypium hirsutum HOM05D000926 ORTHO05D000707 9.5e-13 77.0 103 56.3
Thecc.04G112900 Theobroma cacao HOM05D000926 ORTHO05D000707 2.1e-12 75.9 102 47.1
Gorai.001G087900 Gossypium raimondii HOM05D000926 ORTHO05D000707 4.7e-12 74.7 103 55.3
Cfa007729 Carpinus fangiana HOM05D000926 ORTHO05D000707 1.1e-11 73.6 109 44.0
CiPaw.03G080300 Carya illinoinensis HOM05D000926 ORTHO05D000707 5.2e-11 71.2 111 40.5
Eucgr.J01435 Eucalyptus grandis HOM05D000926 ORTHO05D000707 5.2e-11 71.2 102 42.2
Eucgr.J01437 Eucalyptus grandis HOM05D000926 ORTHO05D000707 8.9e-11 70.5 102 42.2
Lalb_Chr10g0092481 Lupinus albus HOM05D000926 ORTHO05D000707 1.2e-10 70.1 105 40.0
Duzib138G1110 Durio zibethinus HOM05D000926 ORTHO05D000707 4.4e-10 68.2 103 57.3
Duzib133G0632 Durio zibethinus HOM05D000926 ORTHO05D000707 7.6e-10 67.4 89 48.3
Eucgr.J01436 Eucalyptus grandis HOM05D000926 ORTHO05D000707 7.6e-10 67.4 103 43.7
Manes.01G105800 Manihot esculenta HOM05D000926 ORTHO05D000707 1.3e-09 66.6 109 42.2
CiPaw.03G080100 Carya illinoinensis HOM05D000926 ORTHO05D000707 2.2e-09 65.9 113 42.5
Phvul.008G023400 Phaseolus vulgaris HOM05D000926 ORTHO05D000707 2.2e-09 65.9 107 39.3
Sabra04G0073800 Salix brachista HOM05D000926 ORTHO05D000707 2.2e-09 65.9 105 37.1
Eucgr.J01438 Eucalyptus grandis HOM05D000926 ORTHO05D000707 2.9e-09 65.5 103 40.8
FAN05G2979 Fragaria x ananassa HOM05D000926 ORTHO05D000707 2.9e-09 65.5 108 38.0
CiPaw.03G077200 Carya illinoinensis HOM05D000926 ORTHO05D000707 3.8e-09 65.1 103 37.9
PGR042G1069 Punica granatum HOM05D000926 ORTHO05D000707 8.4e-09 63.9 98 50.0
Cfa007731 Carpinus fangiana HOM05D000926 ORTHO05D000707 1.1e-08 63.5 112 40.2
Prupe.3G245400 Prunus persica HOM05D000926 ORTHO05D000707 1.1e-08 63.5 107 39.3
Glyma.18G277600 Glycine max HOM05D000926 ORTHO05D000707 1.4e-08 63.2 102 38.2
Potri.017G107100 Populus trichocarpa HOM05D000926 ORTHO05D000707 1.4e-08 63.2 94 41.5
Aa31LG11G4120 Aethionema arabicum HOM05D000926 ORTHO05D000707 2.4e-08 62.4 94 41.5
Lj1g0009060 Lotus japonicus HOM05D000926 ORTHO05D000707 2.4e-08 62.4 96 40.6
TPR.G3253 Trifolium pratense HOM05D000926 ORTHO05D000707 2.4e-08 62.4 100 38.0
ATR0691G108 Amborella trichopoda HOM05D000926 ORTHO05D000707 3.2e-08 62.0 95 38.9
Medtr0542s0020 Medicago truncatula HOM05D000926 ORTHO05D000707 3.2e-08 62.0 96 40.6
Ah.16g100770 Amaranthus hybridus HOM05D000926 ORTHO05D000707 4.1e-08 61.6 103 36.9
Haze_14349 Corylus avellana HOM05D000926 ORTHO05D000707 4.1e-08 61.6 96 42.7
MELO3C018927.2 Cucumis melo HOM05D000926 ORTHO05D000707 7.1e-08 60.8 101 39.6
Oeu032854.1 Olea europaea HOM05D000926 ORTHO05D000707 7.1e-08 60.8 111 39.6
TPR.G38908 Trifolium pratense HOM05D000926 ORTHO05D000707 9.2e-08 60.5 95 36.8
Hma1.2p1_0588F.1_g184550 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 1.2e-07 60.1 90 41.1
MD09G1078800 Malus domestica HOM05D000926 ORTHO05D000707 1.2e-07 60.1 102 39.2
Sc10g0000430 Simmondsia chinensis HOM05D000926 ORTHO05D000707 1.2e-07 60.1 86 43.0
Psat3g193960 Pisum sativum HOM05D000926 ORTHO05D000707 1.6e-07 59.7 96 37.5
Duzib138G1671 Durio zibethinus HOM05D000926 ORTHO05D000707 2.7e-07 58.9 96 40.6
Glyma.08G254800 Glycine max HOM05D000926 ORTHO05D000707 2.7e-07 58.9 94 42.6
Potri.004G108440 Populus trichocarpa HOM05D000926 ORTHO05D000707 2.7e-07 58.9 95 41.1
Carub.0007s1520 Capsella rubella HOM05D000926 ORTHO05D000707 3.5e-07 58.5 107 33.6
AL4G15740 Arabidopsis lyrata HOM05D000926 ORTHO05D000707 4.6e-07 58.2 103 36.9
QL02p063866 Quercus lobata HOM05D000926 ORTHO05D000707 4.6e-07 58.2 103 38.8
Sp4g03730 Schrenkiella parvula HOM05D000926 ORTHO05D000707 4.6e-07 58.2 99 39.4
Thecc.04G113000 Theobroma cacao HOM05D000926 ORTHO05D000707 4.6e-07 58.2 95 38.9
AT2G24762 Arabidopsis thaliana HOM05D000926 ORTHO05D000707 6.0e-07 57.8 100 39.0
DCAR_002021 Daucus carota HOM05D000926 ORTHO05D000707 6.0e-07 57.8 109 40.4
Manes.02G062400 Manihot esculenta HOM05D000926 ORTHO05D000707 6.0e-07 57.8 106 36.8
Medtr1g013410 Medicago truncatula HOM05D000926 ORTHO05D000707 6.0e-07 57.8 95 37.9
Sabra17G0090200 Salix brachista HOM05D000926 ORTHO05D000707 6.0e-07 57.8 91 39.6
Thecc.04G112800 Theobroma cacao HOM05D000926 ORTHO05D000707 6.0e-07 57.8 101 54.5
MSTRG.2960 Avicennia marina HOM05D000926 ORTHO05D000707 7.8e-07 57.4 104 30.8
HanXRQChr09g0263311 Helianthus annuus HOM05D000926 ORTHO05D000707 7.8e-07 57.4 107 38.3
QL02p063891 Quercus lobata HOM05D000926 ORTHO05D000707 7.8e-07 57.4 94 39.4
Aqoxy7G02467 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 1.0e-06 57.0 83 43.4
CsaV3_4G009860 Cucumis sativus L. HOM05D000926 ORTHO05D000707 1.0e-06 57.0 98 37.8
Nn8g40369 Nelumbo nucifera HOM05D000926 ORTHO05D000707 1.0e-06 57.0 102 40.2
THA.LOC104803603 Tarenaya hassleriana HOM05D000926 ORTHO05D000707 1.0e-06 57.0 95 38.9
AL7G27280 Arabidopsis lyrata HOM05D000926 ORTHO05D000707 1.3e-06 56.6 102 35.3
MELO3C018921.2 Cucumis melo HOM05D000926 ORTHO05D000707 1.3e-06 56.6 104 32.7
Duzib168G1758 Durio zibethinus HOM05D000926 ORTHO05D000707 1.3e-06 56.6 124 33.1
Gohir.D07G185000 Gossypium hirsutum HOM05D000926 ORTHO05D000707 1.3e-06 56.6 97 39.2
Gorai.001G205500 Gossypium raimondii HOM05D000926 ORTHO05D000707 1.3e-06 56.6 97 39.2
PSO782G3113 Papaver somniferum HOM05D000926 ORTHO05D000707 1.3e-06 56.6 97 44.3
Potri.017G107300 Populus trichocarpa HOM05D000926 ORTHO05D000707 1.3e-06 56.6 84 38.1
Gohir.A07G178200 Gossypium hirsutum HOM05D000926 ORTHO05D000707 1.7e-06 56.2 94 37.2
Hma1.2p1_2231F.1_g317580 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 1.7e-06 56.2 92 38.0
Aa31LG2G18610 Aethionema arabicum HOM05D000926 ORTHO05D000707 2.3e-06 55.8 100 43.0
Aa31sc359G10 Aethionema arabicum HOM05D000926 ORTHO05D000707 2.3e-06 55.8 88 35.2
Carub.0004s0440 Capsella rubella HOM05D000926 ORTHO05D000707 2.3e-06 55.8 99 34.3
CiPaw.08G003900 Carya illinoinensis HOM05D000926 ORTHO05D000707 3.0e-06 55.5 99 35.4
PGR004G2735 Punica granatum HOM05D000926 ORTHO05D000707 3.0e-06 55.5 86 44.2
AT4G25760 Arabidopsis thaliana HOM05D000926 ORTHO05D000707 3.9e-06 55.1 103 34.0
CARHR116830 Cardamine hirsuta HOM05D000926 ORTHO05D000707 3.9e-06 55.1 100 36.0
PSO063G3264 Papaver somniferum HOM05D000926 ORTHO05D000707 3.9e-06 55.1 90 43.3
PGR044G0045 Punica granatum HOM05D000926 ORTHO05D000707 3.9e-06 55.1 92 41.3
Sp7g29530 Schrenkiella parvula HOM05D000926 ORTHO05D000707 3.9e-06 55.1 99 38.4
AL7G20290 Arabidopsis lyrata HOM05D000926 ORTHO05D000707 5.1e-06 54.7 96 40.6
CANSAT11G0083 Cannabis sativa HOM05D000926 ORTHO05D000707 5.1e-06 54.7 104 34.6
CARHR188520 Cardamine hirsuta HOM05D000926 ORTHO05D000707 5.1e-06 54.7 87 40.2
Ca_13080_v3 Cicer arietinum L. HOM05D000926 ORTHO05D000707 5.1e-06 54.7 89 37.1
Nitab4.5_0005612g0030 Nicotiana tabacum HOM05D000926 ORTHO05D000707 5.1e-06 54.7 97 33.0
SalBow1G7500 Salvia bowleyana HOM05D000926 ORTHO05D000707 5.1e-06 54.7 107 30.8
TAR626G0668 Trochodendron aralioides HOM05D000926 ORTHO05D000707 5.1e-06 54.7 83 41.0
CARHR233210 Cardamine hirsuta HOM05D000926 ORTHO05D000707 6.6e-06 54.3 97 34.0
Manes.01G105900 Manihot esculenta HOM05D000926 ORTHO05D000707 6.6e-06 54.3 111 39.6
Nn2g12621 Nelumbo nucifera HOM05D000926 ORTHO05D000707 6.6e-06 54.3 92 38.0
Nitab4.5_0013205g0010 Nicotiana tabacum HOM05D000926 ORTHO05D000707 6.6e-06 54.3 84 39.3
arahy.Tifrunner.gnm1.ann1.DUC516 Arachis hypogaea HOM05D000926 ORTHO05D000707 8.6e-06 53.9 103 34.0
AUR62009442 Chenopodium quinoa HOM05D000926 ORTHO05D000368 8.6e-06 53.9 86 34.9
AUR62023120 Chenopodium quinoa HOM05D000926 ORTHO05D000707 8.6e-06 53.9 96 35.4
HanXRQChr05g0136731 Helianthus annuus HOM05D000926 ORTHO05D000707 8.6e-06 53.9 108 37.0
Nitab4.5_0002171g0020 Nicotiana tabacum HOM05D000926 ORTHO05D000707 8.6e-06 53.9 91 33.0
Oeu049341.1 Olea europaea HOM05D000926 ORTHO05D000707 8.6e-06 53.9 100 38.0
RcHm_v2.0_Chr2g0164161 Rosa chinensis HOM05D000926 ORTHO05D000707 8.6e-06 53.9 107 34.6


User provided reference genes

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