Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10012763m.g Citrus clementina HOM05D007532 ORTHO05D009483 1.6e-104 382.9 210 100.0
Atru.chr8.1383 Acer truncatum HOM05D007532 ORTHO05D009483 1.6e-40 170.2 217 49.8
TAR623G0884 Trochodendron aralioides HOM05D007532 ORTHO05D009483 5.3e-31 138.7 204 45.6
Thecc.05G102000 Theobroma cacao HOM05D007532 ORTHO05D009483 1.2e-30 137.5 202 45.5
Manes.09G046800 Manihot esculenta HOM05D007532 ORTHO05D009483 1.0e-29 134.4 213 45.5
TWI74G0748 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 3.8e-29 132.5 185 47.6
COL.COLO4_29593 Corchorus olitorius HOM05D007532 ORTHO05D009483 8.4e-29 131.3 226 39.4
Duzib093G1477 Durio zibethinus HOM05D007532 ORTHO05D009483 2.1e-27 126.7 214 40.2
Cfa016678 Carpinus fangiana HOM05D007532 ORTHO05D009483 2.7e-27 126.3 193 47.2
Potri.016G071700 Populus trichocarpa HOM05D007532 ORTHO05D009483 3.0e-26 122.9 238 45.0
Haze_19695 Corylus avellana HOM05D007532 ORTHO05D009483 3.9e-26 122.5 190 46.8
Cpa.g.sc104.49 Carica papaya HOM05D007532 ORTHO05D009483 1.1e-25 120.9 225 40.9
GSVIVG01033946001 Vitis vinifera HOM05D007532 ORTHO05D009483 5.7e-25 118.6 202 43.1
RcHm_v2.0_Chr3g0475571 Rosa chinensis HOM05D007532 ORTHO05D009483 8.2e-24 114.8 194 43.3
Gohir.A09G135100 Gossypium hirsutum HOM05D007532 ORTHO05D009483 5.3e-23 112.1 221 37.6
FvH4_6g20110 Fragaria vesca HOM05D007532 ORTHO05D009483 6.9e-23 111.7 195 44.6
FAN14G5580 Fragaria x ananassa HOM05D007532 ORTHO05D009483 6.9e-23 111.7 195 44.6
Gorai.006G150300 Gossypium raimondii HOM05D007532 ORTHO05D009483 6.9e-23 111.7 221 37.1
TWI77G0050 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 1.2e-22 110.9 178 43.8
Gohir.D09G131700 Gossypium hirsutum HOM05D007532 ORTHO05D009483 1.5e-22 110.5 221 36.7
PGR004G2296 Punica granatum HOM05D007532 ORTHO05D009483 1.5e-22 110.5 221 37.1
QL07p037073 Quercus lobata HOM05D007532 ORTHO05D009483 5.9e-22 108.6 191 41.9
Sabra06G0157400 Salix brachista HOM05D007532 ORTHO05D009483 1.0e-21 107.8 206 42.7
Manes.08G032400 Manihot esculenta HOM05D007532 ORTHO05D009483 1.3e-21 107.5 207 39.1
Dinv31750 Davidia involucrata HOM05D010118 ORTHO05D009483 1.7e-21 107.1 196 44.9
CiPaw.10G016200 Carya illinoinensis HOM05D007532 ORTHO05D009483 2.9e-21 106.3 187 41.2
FAN05G0427 Fragaria x ananassa HOM05D007532 ORTHO05D009483 1.1e-20 104.4 192 43.8
DCAR_020715 Daucus carota HOM05D007532 ORTHO05D009483 3.2e-20 102.8 204 39.2
Sabra16G0072100 Salix brachista HOM05D007532 ORTHO05D009483 3.2e-20 102.8 237 42.2
Duzib128G1100 Durio zibethinus HOM05D007532 ORTHO05D009483 4.2e-20 102.4 196 37.2
Potri.006G204400 Populus trichocarpa HOM05D007532 ORTHO05D009483 7.2e-20 101.7 204 44.1
Sabra16G0073900 Salix brachista HOM05D007532 ORTHO05D009483 1.2e-19 100.9 238 41.6
Actinidia32050 Actinidia chinensis HOM05D007532 ORTHO05D009483 2.7e-19 99.8 191 40.8
Oeu055526.1 Olea europaea HOM05D007532 ORTHO05D009483 5.1e-18 95.5 209 36.4
Oeu045039.1 Olea europaea HOM05D007532 ORTHO05D009483 9.7e-17 91.3 212 36.8
CANSAT64G0088 Cannabis sativa HOM05D007532 ORTHO05D009483 1.3e-16 90.9 204 35.3
Duzib106G1076 Durio zibethinus HOM05D007532 ORTHO05D009483 2.8e-16 89.7 203 36.0
Phvul.007G269000 Phaseolus vulgaris HOM05D007532 ORTHO05D009483 2.8e-16 89.7 194 37.1
Gohir.D04G094900 Gossypium hirsutum HOM05D007532 ORTHO05D009483 3.7e-16 89.4 185 41.1
Gorai.009G397600 Gossypium raimondii HOM05D007532 ORTHO05D009483 3.7e-16 89.4 185 41.1
Rhsim03G0066200 Rhododendron simsii HOM05D007532 ORTHO05D009483 4.1e-15 85.9 191 37.7
ClCG10G018450 Citrullus lanatus HOM05D007532 ORTHO05D009483 5.3e-15 85.5 177 39.0
THA.LOC104826804 Tarenaya hassleriana HOM05D014261 ORTHO05D016579 9.1e-15 84.7 117 47.9
Lsat_1_v5_gn_1_57140 Lactuca sativa HOM05D007532 ORTHO05D009483 1.2e-14 84.3 196 37.2
MD14G1037100 Malus domestica HOM05D007532 ORTHO05D009483 5.9e-14 82.0 180 40.6
Oeu035652.1 Olea europaea HOM05D007532 ORTHO05D009483 7.7e-14 81.6 215 34.4
MBI17_g22147_MAGBIO Magnolia biondii HOM05D007532 ORTHO05D009483 1.7e-13 80.5 207 35.7
Nn6g34736 Nelumbo nucifera HOM05D007532 ORTHO05D009483 5.0e-13 79.0 188 34.6
Lsat_1_v5_gn_2_55700 Lactuca sativa HOM05D007532 ORTHO05D009483 6.5e-13 78.6 201 34.3
Ca_11714_v3 Cicer arietinum L. HOM05D007532 ORTHO05D009483 8.5e-13 78.2 191 35.1
SalBow5G5402 Salvia bowleyana HOM05D007532 ORTHO05D009483 3.2e-12 76.3 197 33.5
Actinidia04004 Actinidia chinensis HOM05D007532 ORTHO05D009483 4.2e-12 75.9 193 33.2
Gohir.A04G060800 Gossypium hirsutum HOM05D007532 ORTHO05D009483 1.2e-11 74.3 183 35.0
AUR62037048 Chenopodium quinoa HOM05D007532 ORTHO05D009483 2.1e-11 73.6 190 34.7
PSO339G0695 Papaver somniferum HOM05D007532 ORTHO05D009483 2.7e-11 73.2 210 33.3
Prupe.7G097300 Prunus persica HOM05D007532 ORTHO05D009483 2.7e-11 73.2 183 37.2
BcaB01g00362 Brassica carinata HOM05D007532 ORTHO05D009483 6.1e-11 72.0 215 32.6
MELO3C009524.2 Cucumis melo HOM05D007532 ORTHO05D009483 6.1e-11 72.0 186 33.3
Aqoxy1G00693 Aquilegia oxysepala HOM05D007532 ORTHO05D009483 7.9e-11 71.6 178 34.3
Sc20g0006700 Simmondsia chinensis HOM05D007532 ORTHO05D009483 1.0e-10 71.2 175 36.6
TPR.G31864 Trifolium pratense HOM05D007532 ORTHO05D009483 1.0e-10 71.2 199 32.7
PSO384G2238 Papaver somniferum HOM05D007532 ORTHO05D009483 1.8e-10 70.5 213 33.3
Sp5g09820 Schrenkiella parvula HOM05D007532 ORTHO05D009483 1.8e-10 70.5 215 37.7
AUR62006278 Chenopodium quinoa HOM05D007532 ORTHO05D009483 2.3e-10 70.1 190 35.8
Nitab4.5_0006654g0010 Nicotiana tabacum HOM05D007532 ORTHO05D009483 2.3e-10 70.1 173 32.4
ECA238G0408 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-10 69.7 189 33.3
Lj5g0000288 Lotus japonicus HOM05D007532 ORTHO05D009483 3.9e-10 69.3 187 34.2
Carub.0005s1887 Capsella rubella HOM05D007532 ORTHO05D009483 5.1e-10 68.9 212 30.7
Medtr1g057220 Medicago truncatula HOM05D007532 ORTHO05D009483 5.1e-10 68.9 195 33.8
C08p27760 Brassica napus HOM05D007532 ORTHO05D009483 1.5e-09 67.4 214 32.2
CARHR162250 Cardamine hirsuta HOM05D007532 ORTHO05D009483 1.5e-09 67.4 233 31.8
Migut.L01834 Erythranthe guttata HOM05D007532 ORTHO05D009483 1.5e-09 67.4 222 32.0
Thhalv10010711m.g Eutrema salsugineum HOM05D007532 ORTHO05D009483 1.5e-09 67.4 219 30.6
BcaC07g39613 Brassica carinata HOM05D007532 ORTHO05D009483 2.0e-09 67.0 217 32.7
BolC8t50392H Brassica oleracea HOM05D007532 ORTHO05D009483 2.0e-09 67.0 217 32.7
A09p45610 Brassica napus HOM05D007532 ORTHO05D009483 3.3e-09 66.2 222 31.5
BraA09t40022Z Brassica rapa HOM05D007532 ORTHO05D009483 4.4e-09 65.9 222 31.5
DCAR_016921 Daucus carota HOM05D007532 ORTHO05D009483 4.4e-09 65.9 182 33.0
AL5G33190 Arabidopsis lyrata HOM05D007532 ORTHO05D009483 5.7e-09 65.5 215 31.2
Nitab4.5_0000020g0210 Nicotiana tabacum HOM05D007532 ORTHO05D009483 5.7e-09 65.5 224 29.0
AT3G52480 Arabidopsis thaliana HOM05D007532 ORTHO05D009483 7.4e-09 65.1 212 33.0
Sp3g09870 Schrenkiella parvula HOM05D014261 ORTHO05D016579 2.2e-08 63.5 188 36.2
Lalb_Chr02g0154541 Lupinus albus HOM05D007532 ORTHO05D009483 2.8e-08 63.2 188 35.6
arahy.Tifrunner.gnm1.ann1.R0B094 Arachis hypogaea HOM05D007532 ORTHO05D009483 4.8e-08 62.4 187 36.4
arahy.Tifrunner.gnm1.ann1.U8RNVP Arachis hypogaea HOM05D007532 ORTHO05D009483 4.8e-08 62.4 187 36.4
MSTRG.10404 Avicennia marina HOM05D007532 ORTHO05D009483 4.8e-08 62.4 196 28.6
Lj1C1049T4 Lonicera japonica HOM05D007532 ORTHO05D009483 4.8e-08 62.4 130 34.6
Prupe.2G218900 Prunus persica HOM05D007532 ORTHO05D009483 6.3e-08 62.0 183 33.9
Dinv31446 Davidia involucrata HOM05D002150 ORTHO05D002191 1.4e-07 60.8 206 29.1
HanXRQChr14g0458181 Helianthus annuus HOM05D002150 ORTHO05D002191 1.4e-07 60.8 200 32.5
Hma1.2p1_1263F.1_g271270 Hydrangea macrophylla HOM05D002150 ORTHO05D002191 1.8e-07 60.5 206 30.6
AL3G23190 Arabidopsis lyrata HOM05D014261 ORTHO05D016579 2.4e-07 60.1 184 32.6
TWI15G1205 Tripterygium wilfordii HOM05D002150 ORTHO05D002191 2.4e-07 60.1 192 34.9
BolC1t05302H Brassica oleracea HOM05D014261 ORTHO05D016579 3.1e-07 59.7 183 33.3
CSS0034701 Camellia sinensis var. sinensis HOM05D002150 ORTHO05D002191 7.0e-07 58.5 204 29.4
BNapus_Darmor_BZH_scaffold_145p00030 Brassica napus HOM05D014261 ORTHO05D016579 1.5e-06 57.4 183 33.9
CSS0006598 Camellia sinensis var. sinensis HOM05D002150 ORTHO05D002191 2.0e-06 57.0 204 28.9
HanXRQChr08g0220401 Helianthus annuus HOM05D002150 ORTHO05D002191 2.0e-06 57.0 204 29.4
Eucgr.A02598 Eucalyptus grandis HOM05D007532 ORTHO05D009483 2.6e-06 56.6 222 30.6
Lsat_1_v5_gn_2_119741 Lactuca sativa HOM05D002150 ORTHO05D002191 4.5e-06 55.8 194 32.0
QL08p059179 Quercus lobata HOM05D002150 ORTHO05D002191 4.5e-06 55.8 202 30.7
Aa31LG10G7530 Aethionema arabicum HOM05D007532 ORTHO05D009483 5.9e-06 55.5 197 31.5


User provided reference genes

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