Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 9.7e-124 446.8 224 100.0
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 4.9e-75 285.0 175 78.9
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 1.1e-74 283.9 221 70.6
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 3.5e-73 278.9 191 73.8
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 1.7e-72 276.6 191 74.3
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 6.6e-72 274.6 191 73.3
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 1.1e-71 273.9 191 73.3
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 1.9e-71 273.1 181 74.6
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 9.5e-71 270.8 192 69.3
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 1.6e-70 270.0 189 71.4
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 2.1e-70 269.6 202 68.3
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 8.1e-70 267.7 190 70.0
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 3.1e-69 265.8 176 73.9
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 5.2e-69 265.0 180 73.3
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 6.8e-69 264.6 215 64.7
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 6.8e-69 264.6 188 71.3
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 1.2e-68 263.8 191 66.5
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 4.4e-68 261.9 186 67.7
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 4.4e-68 261.9 199 66.8
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 4.4e-68 261.9 188 68.6
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 7.5e-68 261.2 220 62.3
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 7.5e-68 261.2 169 75.7
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 1.3e-67 260.4 220 62.3
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 1.7e-67 260.0 181 71.8
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 4.9e-67 258.5 176 72.2
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 1.4e-66 256.9 172 70.9
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 3.2e-66 255.8 201 66.2
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 4.1e-66 255.4 189 66.1
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 4.1e-66 255.4 219 63.5
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 5.4e-66 255.0 190 68.4
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 9.2e-66 254.2 189 63.5
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 1.6e-65 253.4 196 67.3
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 2.1e-65 253.1 192 67.7
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 2.7e-65 252.7 193 66.8
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 4.6e-65 251.9 191 67.5
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 6.0e-65 251.5 212 61.3
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 7.8e-65 251.1 196 65.3
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 1.0e-64 250.8 176 69.3
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 1.0e-64 250.8 187 65.2
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 3.0e-64 249.2 173 69.4
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 5.1e-64 248.4 172 74.4
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 6.6e-64 248.1 173 70.5
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 1.5e-63 246.9 175 68.0
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 3.3e-63 245.7 219 62.1
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 4.3e-63 245.4 157 75.8
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 4.3e-63 245.4 197 62.4
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 4.3e-63 245.4 169 70.4
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 5.6e-63 245.0 185 64.3
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 5.6e-63 245.0 182 67.6
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 5.6e-63 245.0 167 71.9
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 5.6e-63 245.0 179 68.2
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 7.3e-63 244.6 176 68.8
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 7.3e-63 244.6 144 77.1
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 9.5e-63 244.2 192 64.1
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 2.8e-62 242.7 162 70.4
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 3.6e-62 242.3 137 81.8
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 3.6e-62 242.3 168 68.5
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 6.2e-62 241.5 221 61.1
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 1.1e-61 240.7 203 61.6
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.4e-61 240.4 198 63.6
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 1.8e-61 240.0 174 66.7
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 2.3e-61 239.6 221 61.1
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 4.0e-61 238.8 218 58.7
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 8.9e-61 237.7 191 64.9
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 1.5e-60 236.9 137 81.8
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 4.4e-60 235.3 187 63.6
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 7.6e-60 234.6 178 65.2
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 7.6e-60 234.6 190 59.5
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 7.6e-60 234.6 172 65.7
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 1.7e-59 233.4 173 65.3
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 1.7e-59 233.4 173 65.3
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 2.9e-59 232.6 224 56.2
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 8.4e-59 231.1 185 62.7
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 1.4e-58 230.3 160 70.6
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 5.4e-58 228.4 200 59.5
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 9.2e-58 227.6 183 65.0
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 1.6e-57 226.9 211 59.7
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 1.3e-56 223.8 149 69.8
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 1.7e-56 223.4 169 63.9
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 6.6e-56 221.5 164 65.2
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 6.6e-56 221.5 164 65.2
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 1.9e-55 219.9 219 56.6
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 2.5e-55 219.5 214 56.5
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.5e-55 219.5 164 64.6
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 4.7e-54 215.3 226 54.0
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 3.1e-53 212.6 181 60.8
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 1.2e-52 210.7 150 69.3
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 4.4e-52 208.8 196 55.6
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.1e-50 204.1 196 56.1
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 1.1e-50 204.1 135 68.1
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 1.9e-50 203.4 187 59.4
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 1.8e-45 186.8 112 72.3
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 5.3e-45 185.3 208 51.0
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.3e-43 180.6 141 63.8
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 1.2e-41 174.1 201 52.7
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 3.5e-41 172.6 168 53.0
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 3.9e-40 169.1 147 57.1
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 3.2e-34 149.4 207 46.4
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 9.3e-34 147.9 143 51.7
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 7.9e-33 144.8 84 77.4
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 7.9e-33 144.8 150 47.3
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 2.9e-27 126.3 66 83.3
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 3.1e-21 106.3 90 67.8
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 1.0e-19 101.3 82 57.3
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 3.2e-18 96.3 90 63.3
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 3.2e-18 96.3 127 48.0
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 1.0e-16 91.3 55 72.7
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 1.1e-15 87.8 63 60.3
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 3.1e-13 79.7 92 51.1
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 2.0e-12 77.0 62 56.5
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 2.0e-07 60.5 37 70.3
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 6.3e-06 55.5 59 40.7


User provided reference genes

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