Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 4.8e-296 1020.4 502 100.0
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 1.7e-200 703.0 494 69.6
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 4.0e-194 681.8 492 68.7
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 7.6e-193 677.6 487 69.0
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 9.9e-193 677.2 488 69.5
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 1.7e-192 676.4 492 70.7
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 2.4e-191 672.5 493 67.5
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 7.8e-190 667.5 484 70.0
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 1.7e-189 666.4 504 67.3
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 1.2e-187 660.2 496 66.9
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 6.2e-187 657.9 494 66.2
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 9.0e-186 654.1 487 67.1
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 9.0e-186 654.1 500 66.2
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 3.2e-183 645.6 504 65.3
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 2.1e-182 642.9 507 65.5
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 7.8e-182 641.0 496 64.7
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 2.1e-179 632.9 507 64.9
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 2.4e-178 629.4 499 63.1
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.7e-176 623.2 502 64.5
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 2.2e-176 622.9 468 66.5
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 9.3e-175 617.5 492 64.6
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 2.7e-174 615.9 489 64.2
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 1.8e-170 603.2 493 61.3
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 3.4e-169 599.0 462 66.2
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 4.5e-169 598.6 563 56.8
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 3.2e-167 592.4 500 61.0
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 3.2e-167 592.4 508 59.8
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 2.3e-165 586.3 486 61.1
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 3.9e-165 585.5 484 58.5
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 1.1e-164 583.9 493 61.5
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 1.5e-164 583.6 484 59.1
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 7.4e-164 581.3 549 56.5
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 4.8e-163 578.6 613 53.2
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 5.8e-161 571.6 505 59.0
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 7.6e-161 571.2 470 58.9
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 4.9e-160 568.5 503 58.6
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 6.5e-160 568.2 515 59.2
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.4e-159 567.0 495 60.4
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 1.9e-159 566.6 488 57.6
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 4.2e-159 565.5 503 59.6
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 9.3e-159 564.3 486 59.5
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 6.0e-158 561.6 507 57.6
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 1.0e-157 560.8 478 59.8
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 3.0e-157 559.3 488 59.6
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 3.9e-157 558.9 503 59.2
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 3.3e-156 555.8 504 59.7
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 3.1e-154 549.3 505 56.2
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 1.5e-153 547.0 490 57.8
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 1.7e-152 543.5 370 73.2
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 1.7e-152 543.5 487 56.3
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 2.9e-152 542.7 494 57.7
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 3.6e-150 535.8 479 56.2
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 1.4e-149 533.9 498 57.6
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 3.0e-149 532.7 509 55.4
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 1.9e-148 530.0 484 58.1
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 1.3e-147 527.3 493 56.4
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 1.3e-147 527.3 509 55.6
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 2.6e-145 519.6 506 55.5
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 1.4e-143 513.8 507 54.2
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 1.9e-143 513.5 483 55.7
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 4.2e-143 512.3 489 55.6
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 5.5e-143 511.9 473 55.0
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 6.1e-142 508.4 367 70.6
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 2.6e-140 503.1 496 53.8
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 1.3e-139 500.7 581 48.5
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 1.7e-139 500.4 496 53.6
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 3.1e-138 496.1 497 52.7
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 5.9e-137 491.9 507 53.1
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 7.7e-137 491.5 469 53.7
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 3.8e-136 489.2 403 63.3
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 4.2e-135 485.7 459 56.4
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.2e-134 484.2 459 56.2
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 2.2e-128 463.4 499 49.7
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.1e-127 461.1 467 54.4
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 5.5e-127 458.8 426 55.2
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 1.8e-125 453.8 344 66.3
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 1.4e-122 444.1 488 50.2
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 9.1e-122 441.4 401 58.9
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 1.0e-117 427.9 400 55.8
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 1.4e-114 417.5 494 46.8
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 6.1e-110 402.1 491 45.2
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 5.7e-108 395.6 573 43.1
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 8.3e-107 391.7 518 45.2
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 2.8e-102 376.7 354 56.2
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 1.3e-96 357.8 503 42.3
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 2.3e-93 347.1 315 56.5
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 1.9e-82 310.8 287 56.4
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 6.0e-81 305.8 482 40.2
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 3.0e-72 276.9 217 62.7
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 2.6e-68 263.8 419 39.4
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 1.9e-58 231.1 241 54.8
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 9.3e-50 202.2 200 51.0
Duzib147G0842 Durio zibethinus HOM05D007272 ORTHO05D009305 2.4e-45 187.6 168 59.5
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 2.2e-30 137.9 186 39.8
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 8.8e-24 115.9 172 41.3
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 8.8e-24 115.9 172 41.3
Hma1.2p1_2982F.1_g331250 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 7.4e-23 112.8 72 75.0
Zm00001eb204740 Zea mays HOM05D007272 ORTHO05D009305 2.4e-21 107.8 137 44.5
VMungo0464G0246 Vigna mungo HOM05D007272 ORTHO05D009305 7.7e-20 102.8 130 46.9
CDE04G1434 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 1.0e-19 102.4 127 48.0
Medtr6g011510 Medicago truncatula HOM05D007272 ORTHO05D009305 2.2e-19 101.3 129 39.5
HanXRQChr07g0191831 Helianthus annuus HOM05D007272 ORTHO05D009305 2.1e-17 94.7 72 63.9
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 2.7e-17 94.4 138 42.8
Medtr8g044020 Medicago truncatula HOM05D007272 ORTHO05D009305 4.7e-17 93.6 179 34.6
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 1.8e-16 91.7 157 37.6
MELO3C030970.2 Cucumis melo HOM05D007272 ORTHO05D009305 2.3e-16 91.3 74 63.5
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 2.2e-14 84.7 107 45.8
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 1.9e-10 71.6 51 56.9
MSTRG.9273 Avicennia marina HOM05D003769 ORTHO05D004521 1.6e-09 68.6 241 28.6
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 2.1e-09 68.2 70 44.3
Zm00001eb160220 Zea mays HOM05D003769 ORTHO05D004521 2.1e-09 68.2 241 27.4
Lj5C147T4 Lonicera japonica HOM05D003769 ORTHO05D004521 8.0e-09 66.2 246 26.4
Nn4g23791 Nelumbo nucifera HOM05D003769 ORTHO05D004521 1.0e-08 65.9 245 29.4
Os01g0575500 Oryza sativa ssp. japonica HOM05D003769 ORTHO05D004521 1.8e-08 65.1 263 27.4
FAN19G2836 Fragaria x ananassa HOM05D007272 ORTHO05D045475 4.0e-08 63.9 39 74.4
ECA233G5984 Erigeron canadensis HOM05D003769 ORTHO05D004521 2.0e-07 61.6 246 26.8
EL10Ac5g10958 Beta vulgaris HOM05D003913 ORTHO05D004803 9.7e-07 59.3 327 21.4
Zm00001eb326820 Zea mays HOM05D005508 ORTHO05D006882 8.3e-06 56.2 395 23.5


User provided reference genes

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