Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 0.0e+00 1083.9 567 100.0
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 3.5e-239 831.6 571 77.8
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 7.1e-232 807.4 571 75.5
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 5.1e-230 801.2 571 74.3
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 1.5e-229 799.7 571 74.1
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.5e-229 799.7 570 74.4
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 3.3e-229 798.5 570 74.4
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 1.4e-227 793.1 566 74.6
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 2.0e-226 789.3 571 74.4
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 2.9e-225 785.4 570 72.5
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.1e-224 783.5 571 73.2
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 2.1e-223 779.2 565 74.0
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 2.7e-223 778.9 565 72.7
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.1e-223 777.7 566 74.2
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 1.0e-222 776.9 567 73.0
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.8e-222 776.2 565 74.0
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 6.7e-222 774.2 570 71.9
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.1e-221 773.5 560 72.7
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.1e-221 773.5 565 74.0
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 2.5e-221 772.3 568 72.7
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 7.4e-221 770.8 580 72.2
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 2.8e-220 768.8 570 72.1
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 8.2e-220 767.3 568 72.4
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 1.4e-219 766.5 571 71.5
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 2.4e-219 765.8 565 71.9
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 4.1e-219 765.0 565 71.3
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 3.4e-218 761.9 565 71.3
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 5.0e-217 758.1 555 72.3
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.1e-216 756.9 564 71.8
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.4e-216 756.5 565 71.5
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 2.1e-215 752.7 572 71.7
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 4.7e-215 751.5 565 71.5
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 7.9e-215 750.7 565 72.2
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.0e-214 750.4 566 71.2
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 3.0e-214 748.8 569 71.0
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 4.4e-213 745.0 572 69.2
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 5.7e-213 744.6 566 70.1
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.7e-212 743.0 570 69.6
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 2.2e-212 742.7 575 69.0
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.8e-212 742.3 571 70.2
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 8.2e-212 740.7 569 69.2
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 1.2e-210 736.9 565 69.2
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 1.3e-209 733.4 570 68.9
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.4e-208 729.9 566 69.3
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 1.2e-207 726.9 566 69.3
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 2.7e-207 725.7 565 68.1
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 4.7e-207 724.9 572 68.4
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 4.7e-207 724.9 588 65.8
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 8.0e-207 724.2 566 68.4
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 1.8e-206 723.0 567 68.6
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 3.0e-206 722.2 570 68.8
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 5.2e-206 721.5 592 66.0
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 6.7e-206 721.1 568 68.8
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 3.3e-205 718.8 570 66.8
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 9.7e-205 717.2 637 62.6
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 6.3e-204 714.5 572 67.7
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.4e-203 713.4 566 68.4
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.4e-203 713.4 566 67.5
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 4.1e-203 711.8 566 67.3
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 4.1e-203 711.8 567 68.4
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 1.6e-202 709.9 566 67.0
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 7.7e-202 707.6 570 66.7
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 1.3e-201 706.8 570 66.1
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 2.2e-201 706.1 566 67.8
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 2.9e-201 705.7 567 69.1
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 6.5e-201 704.5 577 66.6
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 5.5e-200 701.4 566 67.0
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 5.5e-200 701.4 569 66.8
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 2.1e-199 699.5 566 65.9
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 3.0e-198 695.7 565 65.8
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 2.6e-197 692.6 570 66.5
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 7.5e-197 691.0 567 67.0
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 2.8e-196 689.1 576 65.6
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 9.1e-195 684.1 566 65.4
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 1.6e-194 683.3 566 65.5
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 2.0e-194 682.9 574 65.5
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 1.4e-190 670.2 566 65.2
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 1.4e-190 670.2 566 65.2
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 3.0e-190 669.1 567 65.3
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 3.0e-190 669.1 567 65.3
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 4.0e-190 668.7 566 65.0
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 6.8e-190 667.9 564 65.6
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 4.5e-186 655.2 568 64.3
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 3.8e-185 652.1 573 62.1
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 9.5e-184 647.5 575 63.5
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 2.8e-183 646.0 529 65.4
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 5.9e-178 628.2 529 65.6
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 1.1e-176 624.0 575 59.0
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 1.2e-173 614.0 565 59.8
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 7.5e-173 611.3 574 58.5
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 1.3e-172 610.5 575 58.4
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 1.7e-172 610.1 634 54.7
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 6.0e-170 601.7 510 63.9
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 6.6e-169 598.2 486 67.5
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.4e-163 580.5 524 61.5
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 5.2e-150 535.4 410 68.8
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 1.1e-131 474.6 449 59.9
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 1.9e-115 420.6 586 41.3
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.2e-114 417.9 412 59.7
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 1.3e-111 407.9 568 42.8
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 1.4e-99 367.9 293 68.3
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 3.2e-99 366.7 599 37.1
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 2.6e-96 357.1 293 67.6
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 7.4e-96 355.5 237 76.8
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 8.2e-95 352.1 591 37.1
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 1.2e-93 348.2 226 77.0
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 5.0e-92 342.8 566 37.5
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 1.2e-85 321.6 255 71.0
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 2.5e-67 260.8 174 70.1
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 1.2e-66 258.5 269 55.0
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 2.8e-58 230.7 377 44.8
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 6.4e-55 219.5 152 75.0
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 3.3e-51 207.2 587 27.6
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 1.4e-46 191.8 205 52.7
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 4.1e-38 163.7 156 65.4
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 1.2e-34 152.1 152 55.9
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.3e-26 125.6 71 78.9
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 3.5e-13 80.9 54 79.6
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 4.0e-09 67.4 64 56.2
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 4.9e-07 60.5 53 58.5


User provided reference genes

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