Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 2.5e-95 352.1 170 100.0
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 6.6e-48 194.5 96 87.5
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 8.6e-48 194.1 96 86.5
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 1.9e-47 193.0 98 85.7
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 2.5e-47 192.6 96 87.5
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 9.5e-47 190.7 100 83.0
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 1.2e-46 190.3 94 88.3
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 8.0e-46 187.6 98 80.6
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 8.0e-46 187.6 94 87.2
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 8.0e-46 187.6 98 80.6
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 1.0e-45 187.2 98 80.6
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 1.8e-45 186.4 95 81.1
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.8e-45 186.4 94 84.0
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.8e-45 186.4 94 84.0
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 4.0e-45 185.3 94 85.1
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 5.2e-45 184.9 98 80.6
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 5.2e-45 184.9 91 85.7
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 5.2e-45 184.9 98 82.7
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 8.9e-45 184.1 91 85.7
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 2.0e-44 183.0 98 80.6
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 3.4e-44 182.2 91 83.5
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 4.4e-44 181.8 91 83.5
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 4.4e-44 181.8 91 85.7
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 5.8e-44 181.4 90 86.7
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 9.8e-44 180.6 102 75.5
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 1.3e-43 180.3 91 83.5
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 1.3e-43 180.3 96 80.2
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 1.3e-43 180.3 96 78.1
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 1.3e-43 180.3 94 80.9
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 2.2e-43 179.5 98 75.5
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 2.9e-43 179.1 94 79.8
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 2.9e-43 179.1 94 79.8
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 3.7e-43 178.7 91 83.5
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 3.7e-43 178.7 91 82.4
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 3.7e-43 178.7 96 81.2
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 3.7e-43 178.7 90 83.3
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 3.7e-43 178.7 90 83.3
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 3.7e-43 178.7 90 83.3
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 4.9e-43 178.3 98 75.5
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 4.9e-43 178.3 98 75.5
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 4.9e-43 178.3 91 81.3
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 4.9e-43 178.3 96 76.0
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 4.9e-43 178.3 91 81.3
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 8.3e-43 177.6 94 79.8
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.3e-43 177.6 94 77.7
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.3e-43 177.6 94 77.7
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 8.3e-43 177.6 98 78.6
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 1.1e-42 177.2 90 84.4
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 1.4e-42 176.8 94 76.6
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 1.4e-42 176.8 94 79.8
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 1.9e-42 176.4 91 80.2
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 2.4e-42 176.0 100 74.0
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 3.2e-42 175.6 91 80.2
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 3.2e-42 175.6 93 79.6
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.4e-42 174.9 94 77.7
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.4e-42 174.9 94 77.7
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 5.4e-42 174.9 91 80.2
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 5.4e-42 174.9 91 80.2
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 7.0e-42 174.5 101 73.3
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 7.0e-42 174.5 91 80.2
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 1.2e-41 173.7 97 73.2
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 1.2e-41 173.7 97 73.2
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 1.2e-41 173.7 91 74.7
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.2e-41 173.7 91 80.2
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 2.0e-41 172.9 94 76.6
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 2.0e-41 172.9 96 75.0
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 2.0e-41 172.9 91 79.1
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 2.0e-41 172.9 91 79.1
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 2.7e-41 172.6 94 76.6
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.7e-41 172.6 94 76.6
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 3.5e-41 172.2 91 79.1
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 3.5e-41 172.2 91 79.1
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 4.6e-41 171.8 91 78.0
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 6.0e-41 171.4 111 69.4
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 6.0e-41 171.4 91 75.8
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 7.8e-41 171.0 91 79.1
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 1.0e-40 170.6 90 78.9
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 1.0e-40 170.6 93 74.2
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.0e-40 170.6 91 76.9
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 1.7e-40 169.9 95 73.7
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 1.7e-40 169.9 95 73.7
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 1.7e-40 169.9 91 76.9
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 1.7e-40 169.9 93 76.3
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.3e-40 169.5 86 82.6
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 2.3e-40 169.5 91 78.0
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 3.9e-40 168.7 91 76.9
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 6.6e-40 167.9 96 72.9
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 6.6e-40 167.9 91 76.9
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 6.6e-40 167.9 90 76.7
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 8.6e-40 167.5 90 76.7
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 2.5e-39 166.0 94 73.4
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 2.5e-39 166.0 91 75.8
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 4.3e-39 165.2 91 75.8
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 5.6e-39 164.9 91 76.9
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 5.6e-39 164.9 98 72.4
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 7.3e-39 164.5 88 78.4
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 2.8e-38 162.5 113 64.6
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 3.6e-38 162.2 91 75.8
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 4.7e-38 161.8 93 75.3
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 8.1e-38 161.0 91 74.7
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 8.1e-38 161.0 95 73.7
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 6.8e-37 157.9 78 84.6
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 8.9e-37 157.5 98 69.4
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 1.2e-36 157.1 93 69.9
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 2.0e-36 156.4 93 66.7
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 2.0e-36 156.4 93 69.9
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 2.0e-36 156.4 93 69.9
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 2.0e-36 156.4 94 72.3
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 2.6e-36 156.0 91 70.3
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 2.6e-36 156.0 91 70.3
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 2.6e-36 156.0 91 70.3
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 3.4e-36 155.6 95 70.5
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 9.8e-36 154.1 91 69.2
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 9.8e-36 154.1 91 69.2
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 9.8e-36 154.1 91 69.2
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 9.8e-36 154.1 91 69.2
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 9.8e-36 154.1 91 69.2
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 1.3e-35 153.7 91 71.4
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.7e-35 153.3 91 70.3
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 8.3e-35 151.0 91 69.2
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.1e-34 150.6 91 69.2
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.9e-34 149.8 82 74.4
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.2e-34 149.1 108 61.1
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 4.3e-31 138.7 78 75.6
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.6e-30 136.7 80 72.5
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 3.1e-29 132.5 74 75.7
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 8.9e-29 131.0 100 57.0
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 4.9e-27 125.2 67 77.6
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 8.4e-27 124.4 88 63.6
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 2.1e-25 119.8 74 74.3
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 3.9e-24 115.5 63 77.8
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 3.3e-23 112.5 61 83.6
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 7.3e-23 111.3 61 78.7
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.6e-22 110.2 74 64.9
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 2.3e-16 89.7 70 52.9
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 5.1e-16 88.6 70 51.4
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 1.2e-12 77.4 61 55.7
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 1.7e-11 73.6 40 70.0
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 3.0e-08 62.8 57 43.9


User provided reference genes

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