Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10010198m.g Citrus clementina HOM05D000852 ORTHO05D000657 3.3e-39 164.5 78 100.0
Ciclev10009872m.g Citrus clementina HOM05D000852 ORTHO05D000657 5.5e-18 94.0 75 64.0
Atru.chr7.509 Acer truncatum HOM05D000852 ORTHO05D000657 2.3e-16 88.6 73 57.5
Thecc.09G161800 Theobroma cacao HOM05D000852 ORTHO05D000657 3.7e-14 81.3 74 52.7
Potri.006G179300 Populus trichocarpa HOM05D000852 ORTHO05D000657 2.0e-12 75.5 75 50.7
Dinv41301 Davidia involucrata HOM05D000852 ORTHO05D000657 2.7e-12 75.1 72 45.8
Sabra06G0136500 Salix brachista HOM05D000852 ORTHO05D000657 2.7e-12 75.1 75 50.7
Ciclev10009878m.g Citrus clementina HOM05D000852 ORTHO05D000657 3.5e-12 74.7 74 47.3
Gorai.004G103600 Gossypium raimondii HOM05D000852 ORTHO05D000657 7.8e-12 73.6 73 46.6
Manes.14G147000 Manihot esculenta HOM05D000852 ORTHO05D000657 1.3e-11 72.8 74 47.3
Gohir.1Z053600 Gossypium hirsutum HOM05D000852 ORTHO05D000657 2.3e-11 72.0 72 45.8
Cpa.g.sc75.14 Carica papaya HOM05D000852 ORTHO05D000657 2.9e-11 71.6 68 50.0
Oeu043532.1 Olea europaea HOM05D000852 ORTHO05D000657 8.6e-11 70.1 74 45.9
TWI32G0298 Tripterygium wilfordii HOM05D000852 ORTHO05D000657 1.9e-10 68.9 74 41.9
Dinv42776 Davidia involucrata HOM05D000852 ORTHO05D000657 3.3e-10 68.2 73 41.1
Dinv43325 Davidia involucrata HOM05D000852 ORTHO05D000657 3.3e-10 68.2 73 41.1
Duzib168G1244 Durio zibethinus HOM05D000852 ORTHO05D000657 7.3e-10 67.0 74 45.9
Potri.018G101600 Populus trichocarpa HOM05D000852 ORTHO05D000657 2.1e-09 65.5 75 46.7
Dinv42777 Davidia involucrata HOM05D000852 ORTHO05D000657 2.8e-09 65.1 73 39.7
Dinv42781 Davidia involucrata HOM05D000852 ORTHO05D000657 2.8e-09 65.1 73 39.7
Dinv43320 Davidia involucrata HOM05D000852 ORTHO05D000657 2.8e-09 65.1 73 39.7
Dinv43324 Davidia involucrata HOM05D000852 ORTHO05D000657 2.8e-09 65.1 73 39.7
Thecc.09G162000 Theobroma cacao HOM05D000852 ORTHO05D000657 2.8e-09 65.1 73 45.2
Prupe.1G096800 Prunus persica HOM05D000852 ORTHO05D000657 6.2e-09 63.9 74 36.5
CSS0009715 Camellia sinensis var. sinensis HOM05D000852 ORTHO05D000657 8.0e-09 63.5 68 42.6
Dinv42780 Davidia involucrata HOM05D000852 ORTHO05D000657 8.0e-09 63.5 69 39.1
Dinv43321 Davidia involucrata HOM05D000852 ORTHO05D000657 8.0e-09 63.5 69 39.1
FAN09G0018 Fragaria x ananassa HOM05D000852 ORTHO05D000657 1.4e-08 62.8 76 39.5
QL02p095769 Quercus lobata HOM05D000852 ORTHO05D000657 1.8e-08 62.4 73 39.7
QL02p095866 Quercus lobata HOM05D000852 ORTHO05D000657 2.3e-08 62.0 76 40.8
Hma1.2p1_0921F.1_g236820 Hydrangea macrophylla HOM05D000852 ORTHO05D000657 4.0e-08 61.2 77 37.7
Hma1.2p1_0921F.1_g236830 Hydrangea macrophylla HOM05D000852 ORTHO05D000657 6.8e-08 60.5 74 39.2
Cc06_g13940 Coffea canephora HOM05D000852 ORTHO05D000657 2.0e-07 58.9 73 39.7
Oeu016834.1 Olea europaea HOM05D000852 ORTHO05D000657 2.6e-07 58.5 74 36.5
Cc06_g13900 Coffea canephora HOM05D000852 ORTHO05D000657 3.4e-07 58.2 73 37.0
CiPaw.08G039700 Carya illinoinensis HOM05D000852 ORTHO05D000657 4.4e-07 57.8 74 40.5
MD02G1013800 Malus domestica HOM05D000852 ORTHO05D000657 4.4e-07 57.8 77 36.4
Oeu008905.1 Olea europaea HOM05D000852 ORTHO05D000657 7.5e-07 57.0 74 35.1
Oeu016830.1 Olea europaea HOM05D000852 ORTHO05D000657 7.5e-07 57.0 74 39.2
RcHm_v2.0_Chr7g0222801 Rosa chinensis HOM05D000852 ORTHO05D000657 7.5e-07 57.0 75 37.3
TAR625G0101 Trochodendron aralioides HOM05D000852 ORTHO05D000657 7.5e-07 57.0 73 38.4
Cc06_g13950 Coffea canephora HOM05D000852 ORTHO05D000657 9.8e-07 56.6 73 38.4
Oeu016833.1 Olea europaea HOM05D000852 ORTHO05D000657 9.8e-07 56.6 74 35.1
Prupe.1G096900 Prunus persica HOM05D000852 ORTHO05D000657 9.8e-07 56.6 75 34.7
Oeu016827.1 Olea europaea HOM05D000852 ORTHO05D000657 1.3e-06 56.2 74 35.1
Sc23g0003440 Simmondsia chinensis HOM05D000852 ORTHO05D000657 2.2e-06 55.5 75 44.0
Haze_03781 Corylus avellana HOM05D000852 ORTHO05D000657 2.9e-06 55.1 73 37.0
FvH4_6g06300 Fragaria vesca HOM05D000852 ORTHO05D000657 2.9e-06 55.1 66 36.4
Cfa021318 Carpinus fangiana HOM05D000852 ORTHO05D000657 3.7e-06 54.7 72 36.1
Cfa023051 Carpinus fangiana HOM05D000852 ORTHO05D000657 3.7e-06 54.7 72 36.1
Cfa023055 Carpinus fangiana HOM05D000852 ORTHO05D000657 3.7e-06 54.7 72 36.1
THA.LOC104819985 Tarenaya hassleriana HOM05D000852 ORTHO05D000657 6.4e-06 53.9 68 41.2
Actinidia31681 Actinidia chinensis HOM05D000852 ORTHO05D000657 8.3e-06 53.5 69 36.2


User provided reference genes

Program Settings