Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10010011m.g Citrus clementina HOM05D007491 ORTHO05D009489 1.9e-42 175.6 101 100.0
COL.COLO4_18682 Corchorus olitorius HOM05D007491 ORTHO05D009489 7.7e-28 127.1 103 71.8
Gohir.D06G094200 Gossypium hirsutum HOM05D007491 ORTHO05D009489 5.5e-26 120.9 107 70.1
Gorai.010G108700 Gossypium raimondii HOM05D007491 ORTHO05D009489 2.1e-25 119.0 107 69.2
Thecc.09G041400 Theobroma cacao HOM05D007491 ORTHO05D009489 2.7e-25 118.6 103 69.9
Duzib150G1582 Durio zibethinus HOM05D007491 ORTHO05D009489 6.1e-25 117.5 103 69.9
Duzib187G0523 Durio zibethinus HOM05D007491 ORTHO05D009489 5.1e-24 114.4 103 68.0
Gohir.A06G094700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 3.7e-22 108.2 113 61.1
TWI63G0394 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 1.4e-21 106.3 105 67.6
Manes.16G071301 Manihot esculenta HOM05D007491 ORTHO05D009489 1.8e-21 105.9 103 66.0
TWI34G1809 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 3.1e-21 105.1 104 65.4
GSVIVG01035656001 Vitis vinifera HOM05D007491 ORTHO05D009489 1.0e-19 100.1 103 64.1
Nn2g11682 Nelumbo nucifera HOM05D007491 ORTHO05D009489 7.9e-17 90.5 103 60.2
PGR102G1855 Punica granatum HOM05D007491 ORTHO05D009489 5.1e-16 87.8 101 57.4
TWI32G0642 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 5.1e-16 87.8 105 61.0
CSS0038485 Camellia sinensis var. sinensis HOM05D007491 ORTHO05D009489 6.7e-16 87.4 105 60.0
TAR383G0584 Trochodendron aralioides HOM05D007491 ORTHO05D009489 1.1e-15 86.7 97 60.8
ECA234G1405 Erigeron canadensis HOM05D007491 ORTHO05D009489 2.6e-15 85.5 95 61.1
AT1G55205 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 7.4e-15 84.0 102 58.8
CiPaw.03G229400 Carya illinoinensis HOM05D007491 ORTHO05D009489 1.7e-14 82.8 103 57.3
AUR62009312 Chenopodium quinoa HOM05D007491 ORTHO05D009489 2.2e-14 82.4 100 52.0
Nn3g18087 Nelumbo nucifera HOM05D007491 ORTHO05D009489 1.1e-13 80.1 96 59.4
Potri.018G082800 Populus trichocarpa HOM05D007491 ORTHO05D009489 1.1e-13 80.1 105 54.3
Eucgr.C03814 Eucalyptus grandis HOM05D007491 ORTHO05D009489 2.4e-13 79.0 103 58.3
PSO566G0269 Papaver somniferum HOM05D007491 ORTHO05D009489 3.1e-13 78.6 107 60.7
RcHm_v2.0_Chr2g0090011 Rosa chinensis HOM05D007491 ORTHO05D009489 3.1e-13 78.6 101 58.4
Lsat_1_v5_gn_5_103040 Lactuca sativa HOM05D007491 ORTHO05D009489 4.1e-13 78.2 106 55.7
PSO782G0237 Papaver somniferum HOM05D007491 ORTHO05D009489 4.1e-13 78.2 107 60.7
Carub.0001s4372 Capsella rubella HOM05D007491 ORTHO05D009489 9.1e-13 77.0 102 54.9
Dinv41621 Davidia involucrata HOM05D007491 ORTHO05D009489 1.6e-12 76.3 97 57.7
Sed0025893 Sechium edule HOM05D007491 ORTHO05D009489 1.6e-12 76.3 105 54.3
AL1G63250 Arabidopsis lyrata HOM05D007491 ORTHO05D009489 2.6e-12 75.5 104 55.8
MD02G1043400 Malus domestica HOM05D007491 ORTHO05D009489 2.6e-12 75.5 103 56.3
HanXRQChr10g0318621 Helianthus annuus HOM05D007491 ORTHO05D009489 3.5e-12 75.1 64 68.8
AT3G13674 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 5.9e-12 74.3 104 54.8
Glyma.05G230000 Glycine max HOM05D007491 ORTHO05D009489 5.9e-12 74.3 76 60.5
CARHR044840 Cardamine hirsuta HOM05D007491 ORTHO05D009489 7.7e-12 73.9 99 54.5
CANSAT78G0421 Cannabis sativa HOM05D007491 ORTHO05D009489 1.0e-11 73.6 103 56.3
THA.LOC104822629 Tarenaya hassleriana HOM05D007491 ORTHO05D009489 1.0e-11 73.6 104 52.9
Thhalv10011893m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 1.3e-11 73.2 90 53.3
Lalb_Chr16g0388121 Lupinus albus HOM05D007491 ORTHO05D009489 1.7e-11 72.8 101 54.5
Sp1g40890 Schrenkiella parvula HOM05D007491 ORTHO05D009489 1.7e-11 72.8 99 53.5
Cc06_g09900 Coffea canephora HOM05D007491 ORTHO05D009489 2.2e-11 72.4 100 57.0
Prupe.7G233600 Prunus persica HOM05D007491 ORTHO05D009489 2.9e-11 72.0 103 51.5
HanXRQChr12g0355021 Helianthus annuus HOM05D007491 ORTHO05D009489 3.8e-11 71.6 102 55.9
MD15G1182000 Malus domestica HOM05D007491 ORTHO05D009489 3.8e-11 71.6 105 55.2
CsaV3_2G002190 Cucumis sativus L. HOM05D007491 ORTHO05D009489 5.0e-11 71.2 103 52.4
Rhsim01G0100500 Rhododendron simsii HOM05D007491 ORTHO05D009489 5.0e-11 71.2 97 54.6
CDE05G0808 Ceratophyllum demersum HOM05D007491 ORTHO05D009489 6.5e-11 70.9 99 50.5
Haze_25768 Corylus avellana HOM05D007491 ORTHO05D009489 8.5e-11 70.5 99 54.5
Thhalv10021835m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 8.5e-11 70.5 103 55.3
Oeu013426.2 Olea europaea HOM05D007491 ORTHO05D009489 8.5e-11 70.5 97 51.5
Carub.0003s1318 Capsella rubella HOM05D007491 ORTHO05D009489 1.5e-10 69.7 104 55.8
CARHR088390 Cardamine hirsuta HOM05D007491 ORTHO05D009489 1.5e-10 69.7 101 50.5
FvH4_1g04361 Fragaria vesca HOM05D007491 ORTHO05D009489 2.5e-10 68.9 103 54.4
FAN19G0791 Fragaria x ananassa HOM05D007491 ORTHO05D009489 2.5e-10 68.9 103 54.4
Glyma.08G037500 Glycine max HOM05D007491 ORTHO05D009489 2.5e-10 68.9 103 54.4
Ah.16g106040 Amaranthus hybridus HOM05D007491 ORTHO05D009489 4.2e-10 68.2 95 49.5
CDE05G2495 Ceratophyllum demersum HOM05D001777 ORTHO05D001809 4.2e-10 68.2 102 47.1
FAN23G1386 Fragaria x ananassa HOM05D007491 ORTHO05D009489 4.2e-10 68.2 103 49.5
Ca_17329_v3 Cicer arietinum L. HOM05D007491 ORTHO05D009489 5.5e-10 67.8 101 51.5
Psat7g015280 Pisum sativum HOM05D007491 ORTHO05D009489 7.2e-10 67.4 93 51.6
BcaC01g01475 Brassica carinata HOM05D007491 ORTHO05D009489 9.4e-10 67.0 96 50.0
C03p92400 Brassica napus HOM05D007491 ORTHO05D009489 9.4e-10 67.0 96 50.0
Thecc.09G107500 Theobroma cacao HOM05D007491 ORTHO05D009489 9.4e-10 67.0 104 49.0
BolC3t21548H Brassica oleracea HOM05D007491 ORTHO05D009489 1.2e-09 66.6 96 50.0
A08p00850 Brassica napus HOM05D007491 ORTHO05D009489 1.6e-09 66.2 96 50.0
BraA08t32143Z Brassica rapa HOM05D007491 ORTHO05D009489 1.6e-09 66.2 96 50.0
Cfa003238 Carpinus fangiana HOM05D007491 ORTHO05D009489 1.6e-09 66.2 100 53.0
Peaxi162Scf00231g00326 Petunia axillaris HOM05D007491 ORTHO05D009489 1.6e-09 66.2 98 51.0
Sabra18G0070600 Salix brachista HOM05D007491 ORTHO05D009489 1.6e-09 66.2 99 54.5
C06p10160 Brassica napus HOM05D007491 ORTHO05D009489 2.1e-09 65.9 95 51.6
Phvul.002G312200 Phaseolus vulgaris HOM05D007491 ORTHO05D009489 2.1e-09 65.9 101 53.5
ClCG11G002390 Citrullus lanatus HOM05D007491 ORTHO05D009489 2.7e-09 65.5 97 50.5
Lsat_1_v5_gn_5_33441 Lactuca sativa HOM05D007491 ORTHO05D009489 2.7e-09 65.5 62 61.3
Lj4g0004733 Lotus japonicus HOM05D007491 ORTHO05D009489 2.7e-09 65.5 58 63.8
Sed0000101 Sechium edule HOM05D007491 ORTHO05D009489 2.7e-09 65.5 103 52.4
TPR.G23496 Trifolium pratense HOM05D007491 ORTHO05D009489 2.7e-09 65.5 105 50.5
BolC6t36089H Brassica oleracea HOM05D000490 ORTHO05D000785 3.6e-09 65.1 91 50.5
Gohir.A07G005300 Gossypium hirsutum HOM05D007491 ORTHO05D009489 6.1e-09 64.3 97 48.5
Lj2g0023927 Lotus japonicus HOM05D007491 ORTHO05D009489 6.1e-09 64.3 100 54.0
EL10Ac2g04054 Beta vulgaris HOM05D007491 ORTHO05D009489 8.0e-09 63.9 96 51.0
Dinv36653 Davidia involucrata HOM05D007491 ORTHO05D009489 8.0e-09 63.9 95 50.5
Hund19532 Selenicereus undatus HOM05D007491 ORTHO05D009489 8.0e-09 63.9 104 50.0
Gohir.D07G006700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 1.0e-08 63.5 73 56.2
Lalb_Chr05g0222981 Lupinus albus HOM05D007491 ORTHO05D009489 1.0e-08 63.5 100 50.0
Hma1.2p1_1463F.1_g285180 Hydrangea macrophylla HOM05D007491 ORTHO05D009489 1.4e-08 63.2 92 48.9
A06p00340 Brassica napus HOM05D007491 ORTHO05D009489 1.8e-08 62.8 95 50.5
BraA06t23249Z Brassica rapa HOM05D007491 ORTHO05D009489 1.8e-08 62.8 95 50.5
Os02g0273900 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 5.2e-08 61.2 48 66.7
Manes.03G022800 Manihot esculenta HOM05D007491 ORTHO05D009489 6.7e-08 60.8 94 48.9
MBI01_g30748_MAGBIO Magnolia biondii HOM05D007491 ORTHO05D009489 1.1e-07 60.1 98 46.9
MELO3C004564.2 Cucumis melo HOM05D007491 ORTHO05D009489 1.5e-07 59.7 95 48.4
BcaB04g16984 Brassica carinata HOM05D007491 ORTHO05D009489 2.6e-07 58.9 96 51.0
Medtr8g103300 Medicago truncatula HOM05D007491 ORTHO05D009489 3.3e-07 58.5 87 48.3
Ciclev10010763m.g Citrus clementina HOM05D007491 ORTHO05D009489 1.3e-06 56.6 55 60.0
Os06g0332500 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 1.7e-06 56.2 101 44.6
FAN26G2745 Fragaria x ananassa HOM05D001691 ORTHO05D001704 2.2e-06 55.8 97 50.5
TWI81G0572 Tripterygium wilfordii HOM05D006762 ORTHO05D003505 6.3e-06 54.3 94 44.7
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 8.2e-06 53.9 86 43.0
VMungo0251G1641 Vigna mungo HOM05D007491 ORTHO05D009489 8.2e-06 53.9 94 47.9


User provided reference genes

Program Settings