Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 3.0e-61 238.4 130 100.0
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 8.3e-51 203.8 130 82.3
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 1.4e-50 203.0 130 84.6
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 1.8e-50 202.6 130 83.1
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 3.1e-50 201.8 130 84.6
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 5.4e-50 201.1 128 83.6
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 9.2e-50 200.3 128 83.6
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 9.2e-50 200.3 130 83.8
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 9.2e-50 200.3 130 83.8
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 1.2e-49 199.9 128 83.6
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 2.7e-49 198.7 130 82.3
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 3.5e-49 198.4 130 80.8
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 4.5e-49 198.0 130 82.3
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 4.5e-49 198.0 130 82.3
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 5.9e-49 197.6 128 82.8
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 5.9e-49 197.6 130 80.8
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 5.9e-49 197.6 128 82.0
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.0e-48 196.8 128 82.8
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.0e-48 196.8 128 82.8
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 1.0e-48 196.8 130 83.1
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.7e-48 196.1 130 80.8
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 2.9e-48 195.3 130 80.0
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 3.9e-48 194.9 127 81.9
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 5.0e-48 194.5 130 79.2
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 6.6e-48 194.1 128 79.7
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 6.6e-48 194.1 128 82.0
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 6.6e-48 194.1 130 80.0
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 8.6e-48 193.7 130 80.0
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 8.6e-48 193.7 130 80.0
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 8.6e-48 193.7 130 80.0
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 8.6e-48 193.7 128 80.5
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 1.1e-47 193.4 130 79.2
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 1.9e-47 192.6 128 79.7
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 1.9e-47 192.6 128 79.7
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 2.5e-47 192.2 130 79.2
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 2.5e-47 192.2 130 80.8
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 3.3e-47 191.8 128 78.9
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 3.3e-47 191.8 128 79.7
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 4.3e-47 191.4 128 78.1
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 4.3e-47 191.4 128 78.9
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 4.3e-47 191.4 130 79.2
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 5.6e-47 191.0 130 80.0
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 5.6e-47 191.0 130 79.2
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 7.3e-47 190.7 128 78.9
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 7.3e-47 190.7 126 80.2
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 7.3e-47 190.7 126 80.2
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 9.5e-47 190.3 122 82.0
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 9.5e-47 190.3 128 77.3
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 1.6e-46 189.5 128 78.1
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 2.1e-46 189.1 128 78.1
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.1e-46 189.1 130 76.9
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 2.8e-46 188.7 128 78.1
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 3.6e-46 188.3 130 76.2
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 4.7e-46 188.0 134 78.4
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 4.7e-46 188.0 130 81.5
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 4.7e-46 188.0 128 78.1
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 6.1e-46 187.6 128 77.3
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 6.1e-46 187.6 130 73.1
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.3e-45 185.7 127 76.4
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 3.1e-45 185.3 130 75.4
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 4.0e-45 184.9 130 73.8
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 5.2e-45 184.5 130 74.6
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 6.8e-45 184.1 126 78.6
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 8.9e-45 183.7 128 77.3
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 8.9e-45 183.7 130 76.2
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.6e-44 182.2 132 76.5
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 9.8e-44 180.3 130 73.1
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 9.8e-44 180.3 130 73.1
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.3e-43 179.9 125 75.2
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 1.3e-43 179.9 130 73.1
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 1.7e-43 179.5 128 73.4
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 1.7e-43 179.5 118 81.4
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 2.2e-43 179.1 119 79.0
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 3.7e-43 178.3 112 84.8
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 4.9e-43 177.9 127 72.4
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 4.1e-42 174.9 130 71.5
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 9.2e-42 173.7 126 71.4
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.2e-41 173.3 128 70.3
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 1.2e-41 173.3 128 74.2
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 1.2e-41 173.3 128 70.3
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 4.6e-41 171.4 128 75.0
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 4.6e-41 171.4 128 69.5
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.0e-40 170.2 127 71.7
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 3.9e-40 168.3 131 74.0
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 5.0e-40 167.9 122 77.0
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 8.6e-40 167.2 120 72.5
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 1.5e-39 166.4 171 57.3
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 1.9e-39 166.0 125 75.2
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 7.3e-39 164.1 136 66.9
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 2.8e-38 162.2 119 73.1
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 3.1e-37 158.7 103 83.5
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 6.8e-37 157.5 128 68.8
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 6.8e-37 157.5 128 68.8
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 8.9e-37 157.1 128 68.8
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 9.8e-36 153.7 101 83.2
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 4.9e-35 151.4 98 79.6
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 8.3e-35 150.6 107 75.7
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 1.4e-34 149.8 185 52.4
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.2e-33 146.7 116 69.0
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 1.6e-33 146.4 103 73.8
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 6.0e-33 144.4 128 58.6
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 3.9e-32 141.7 96 76.0
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 6.6e-32 141.0 128 57.0
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 7.3e-31 137.5 92 79.3
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 2.9e-27 125.6 92 71.7
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 2.3e-24 115.9 120 53.3
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 3.9e-24 115.2 92 68.5
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 5.1e-24 114.8 94 67.0
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 1.9e-23 112.8 93 66.7
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.2e-22 110.2 72 77.8
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.6e-22 108.6 66 86.4
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 4.7e-22 108.2 99 53.5
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 8.9e-21 104.0 63 79.4
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 8.9e-21 104.0 105 61.0
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 2.4e-18 95.9 62 79.0
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 1.6e-17 93.2 62 75.8
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 6.0e-17 91.3 62 74.2
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 2.5e-15 85.9 57 84.2
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 7.3e-15 84.3 64 68.8
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 7.3e-15 84.3 62 67.7
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 1.6e-14 83.2 64 70.3
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 6.4e-11 71.2 117 35.0
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 3.0e-08 62.4 115 30.4
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 1.9e-07 59.7 40 82.5
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 7.3e-07 57.8 61 44.3
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 2.8e-06 55.8 38 76.3


User provided reference genes

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