Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 1.1e-75 286.6 152 100.0
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 1.4e-41 173.3 148 70.3
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 3.1e-41 172.2 148 69.6
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 1.6e-40 169.9 148 67.6
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 2.6e-40 169.1 148 67.6
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 3.5e-40 168.7 148 67.6
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 2.9e-39 165.6 150 68.7
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 8.5e-39 164.1 152 67.1
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 4.2e-38 161.8 152 67.1
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 5.5e-38 161.4 149 67.1
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 1.6e-37 159.8 149 64.4
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.6e-37 159.8 137 71.5
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.1e-37 159.5 136 71.3
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 2.1e-37 159.5 136 71.3
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 3.6e-37 158.7 149 64.4
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 3.6e-37 158.7 152 65.8
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 3.6e-37 158.7 148 64.9
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 1.8e-36 156.4 151 64.9
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 3.0e-36 155.6 156 65.4
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 8.8e-36 154.1 152 60.5
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.2e-35 153.7 144 63.2
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 2.6e-35 152.5 150 63.3
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 2.6e-35 152.5 154 61.0
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 4.4e-35 151.8 148 60.8
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 5.7e-35 151.4 151 59.6
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 7.5e-35 151.0 148 60.1
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 7.5e-35 151.0 155 60.6
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 9.7e-35 150.6 150 62.0
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 9.7e-35 150.6 149 63.8
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 1.3e-34 150.2 151 62.9
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 1.3e-34 150.2 151 62.9
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 1.7e-34 149.8 144 63.9
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 1.7e-34 149.8 164 57.9
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 2.2e-34 149.4 150 62.7
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 4.8e-34 148.3 112 74.1
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 6.3e-34 147.9 150 60.7
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 6.3e-34 147.9 144 63.9
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 8.2e-34 147.5 136 64.7
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 1.1e-33 147.1 137 65.7
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 1.8e-33 146.4 151 60.3
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 1.8e-33 146.4 150 62.0
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 1.8e-33 146.4 156 60.3
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 1.8e-33 146.4 156 60.3
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.8e-33 146.4 151 59.6
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 2.4e-33 146.0 150 62.0
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 2.4e-33 146.0 150 62.0
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.4e-33 146.0 110 73.6
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 2.4e-33 146.0 150 62.0
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.4e-33 146.0 148 60.8
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 3.1e-33 145.6 150 61.3
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.1e-33 145.2 148 60.8
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.1e-33 145.2 148 60.8
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 5.3e-33 144.8 148 60.8
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 5.3e-33 144.8 135 65.9
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 7.0e-33 144.4 156 59.6
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 9.1e-33 144.1 150 61.3
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 9.1e-33 144.1 149 63.8
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 1.2e-32 143.7 152 59.2
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 1.6e-32 143.3 150 58.7
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 1.6e-32 143.3 149 61.7
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 3.5e-32 142.1 137 65.0
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 3.5e-32 142.1 150 61.3
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 3.5e-32 142.1 150 58.7
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 3.5e-32 142.1 114 71.1
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 7.7e-32 141.0 137 61.3
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 1.7e-31 139.8 150 58.0
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 2.2e-31 139.4 132 64.4
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 2.2e-31 139.4 156 60.3
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 2.2e-31 139.4 149 60.4
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 2.2e-31 139.4 148 58.1
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 2.9e-31 139.0 155 58.7
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 2.9e-31 139.0 147 59.2
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 2.9e-31 139.0 148 58.8
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 8.5e-31 137.5 152 59.9
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 2.5e-30 136.0 142 59.2
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 3.2e-30 135.6 149 57.7
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 4.2e-30 135.2 152 56.6
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 5.5e-30 134.8 115 66.1
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 1.2e-29 133.7 148 55.4
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.6e-29 133.3 151 57.0
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 1.6e-29 133.3 155 57.4
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 2.1e-29 132.9 150 58.0
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 2.7e-29 132.5 151 56.3
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 6.1e-29 131.3 114 64.9
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 6.1e-29 131.3 115 67.0
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 6.1e-29 131.3 149 57.0
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 1.4e-28 130.2 125 62.4
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 1.8e-28 129.8 136 58.1
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 1.8e-28 129.8 136 59.6
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 2.3e-28 129.4 80 82.5
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 2.3e-28 129.4 151 55.0
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 2.3e-28 129.4 130 63.1
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 4.0e-28 128.6 148 58.8
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 4.0e-28 128.6 111 66.7
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 4.0e-28 128.6 133 58.6
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 4.0e-28 128.6 133 58.6
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 5.2e-28 128.3 133 58.6
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 2.6e-27 125.9 147 57.8
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 5.7e-27 124.8 123 61.0
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 9.8e-27 124.0 70 90.0
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 1.7e-26 123.2 151 51.0
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 2.8e-26 122.5 70 88.6
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 3.7e-26 122.1 88 72.7
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 8.3e-26 120.9 80 78.8
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 4.5e-24 115.2 132 53.0
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.9e-22 109.8 124 51.6
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 9.5e-22 107.5 214 39.7
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 1.2e-21 107.1 150 51.3
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 1.0e-20 104.0 126 55.6
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 1.2e-19 100.5 118 56.8
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 3.4e-19 99.0 110 60.9
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 4.9e-18 95.1 73 69.9
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.4e-17 93.6 144 47.9
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 1.4e-17 93.6 67 71.6
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 7.0e-17 91.3 95 53.7
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 9.2e-17 90.9 109 51.4
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 9.2e-17 90.9 95 53.7
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 1.5e-14 83.6 88 61.4
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.2e-11 73.9 62 64.5
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 3.4e-11 72.4 75 58.7
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 2.4e-09 66.2 95 46.3
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 7.0e-09 64.7 52 69.2
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 1.6e-08 63.5 48 79.2
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 1.3e-07 60.5 64 50.0
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 2.3e-07 59.7 63 47.6


User provided reference genes

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