Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 2.5e-99 365.5 194 100.0
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 2.7e-53 212.6 202 64.9
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 6.6e-52 208.0 202 62.9
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 8.0e-50 201.1 193 63.7
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 4.0e-49 198.7 194 64.4
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 4.4e-48 195.3 196 63.8
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 9.8e-48 194.1 193 62.2
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 3.7e-47 192.2 204 57.8
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 3.7e-47 192.2 207 58.5
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 6.4e-47 191.4 193 62.2
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 1.6e-45 186.8 203 58.1
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 2.0e-45 186.4 203 60.6
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 2.7e-45 186.0 205 57.1
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 4.6e-45 185.3 202 58.9
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 5.9e-45 184.9 202 58.9
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.7e-44 183.3 197 58.9
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 3.0e-44 182.6 200 57.0
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 5.0e-44 181.8 205 55.6
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.6e-43 178.3 206 54.4
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.6e-43 178.3 206 54.4
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 5.6e-43 178.3 216 52.8
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 2.1e-42 176.4 209 55.5
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 3.6e-42 175.6 215 51.6
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 4.7e-42 175.3 222 54.5
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 8.0e-42 174.5 215 51.2
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 8.0e-42 174.5 200 59.0
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 1.8e-41 173.3 216 51.9
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 1.8e-41 173.3 210 53.8
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 3.1e-41 172.6 214 51.9
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 2.0e-40 169.9 211 55.5
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 3.4e-40 169.1 214 52.3
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 9.8e-40 167.5 190 53.7
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.2e-39 166.4 192 55.2
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 3.7e-39 165.6 190 52.6
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 6.4e-39 164.9 210 51.0
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 1.4e-38 163.7 206 54.4
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 1.3e-36 157.1 183 55.7
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 5.0e-36 155.2 197 51.8
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 8.6e-36 154.5 210 50.5
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 3.3e-35 152.5 213 52.1
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.2e-34 150.6 192 52.1
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 2.1e-34 149.8 191 51.8
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 4.7e-34 148.7 188 50.5
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 4.7e-34 148.7 182 53.3
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 8.1e-34 147.9 190 53.7
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 1.1e-33 147.5 199 51.8
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 2.3e-33 146.4 216 52.3
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 2.3e-33 146.4 193 53.4
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 1.2e-32 144.1 176 54.5
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 1.2e-32 144.1 191 52.4
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 1.2e-32 144.1 197 48.7
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 1.5e-32 143.7 191 50.3
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 1.3e-31 140.6 190 52.6
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 1.7e-31 140.2 191 51.3
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 2.9e-31 139.4 204 49.5
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.9e-30 136.7 210 46.7
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 3.2e-30 136.0 225 42.7
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 7.1e-30 134.8 190 50.0
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 7.1e-30 134.8 196 50.5
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 2.1e-29 133.3 187 47.6
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 2.7e-29 132.9 178 50.6
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 3.5e-29 132.5 178 53.9
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 1.3e-28 130.6 186 51.6
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 1.7e-28 130.2 218 45.0
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 1.7e-28 130.2 189 50.3
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 1.5e-27 127.1 161 50.9
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.9e-27 126.7 107 64.5
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 7.3e-27 124.8 183 48.1
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 9.5e-27 124.4 237 43.5
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 2.1e-26 123.2 194 47.4
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 4.7e-26 122.1 193 49.2
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 1.8e-25 120.2 179 47.5
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 3.1e-25 119.4 243 42.8
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 3.1e-25 119.4 177 51.4
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 8.9e-25 117.9 177 47.5
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 8.9e-25 117.9 186 47.8
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.2e-24 117.5 177 47.5
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 1.2e-24 117.5 168 50.0
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 3.4e-24 115.9 184 47.3
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 5.8e-24 115.2 185 47.6
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 7.6e-24 114.8 225 40.0
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 9.9e-24 114.4 208 42.8
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 1.7e-23 113.6 139 56.8
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 3.8e-23 112.5 141 53.9
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 1.9e-22 110.2 181 43.1
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 2.4e-22 109.8 182 43.4
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 3.0e-20 102.8 205 39.0
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 2.5e-19 99.8 189 41.3
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 5.6e-19 98.6 103 52.4
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 1.2e-18 97.4 189 43.4
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 2.4e-17 93.2 146 44.5
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 3.1e-17 92.8 155 47.1
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 3.2e-14 82.8 146 40.4
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.3e-12 77.4 172 37.2
SEGI_40281 Sequoiadendron giganteum HOM05D007542 ORTHO05D009519 3.4e-08 62.8 154 33.1
Os01g0532300 Oryza sativa ssp. japonica HOM05D007542 ORTHO05D009519 7.6e-08 61.6 36 75.0
SEGI_03822 Sequoiadendron giganteum HOM05D007542 ORTHO05D009519 2.2e-07 60.1 54 57.4
Glyma.02G293000 Glycine max HOM05D007542 ORTHO05D009519 5.4e-06 55.5 169 34.9


User provided reference genes

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