Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10009573m.g Citrus clementina HOM05D008666 ORTHO05D009871 3.7e-103 378.3 195 100.0
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 1.4e-30 137.1 197 43.1
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 1.9e-27 126.7 195 42.1
Atru.chr2.2827 Acer truncatum HOM05D038199 ORTHO05D009871 4.0e-25 119.0 195 42.6
Actinidia18749 Actinidia chinensis HOM05D008666 ORTHO05D009871 4.5e-24 115.5 200 38.0
Hma1.2p1_1003F.1_g246770 Hydrangea macrophylla HOM05D008666 ORTHO05D009871 4.9e-23 112.1 196 36.7
THA.LOC104799910 Tarenaya hassleriana HOM05D008666 ORTHO05D009871 6.4e-23 111.7 198 39.9
Cc05_g12640 Coffea canephora HOM05D008666 ORTHO05D009871 1.4e-22 110.5 198 37.4
QL93p2023_0047 Quercus lobata HOM05D010293 ORTHO05D009871 2.4e-22 109.8 194 38.7
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 2.7e-21 106.3 190 41.6
Migut.H01908 Erythranthe guttata HOM05D008666 ORTHO05D009871 1.3e-20 104.0 194 36.1
Oeu008032.1 Olea europaea HOM05D008666 ORTHO05D009871 5.1e-20 102.1 192 35.4
Nitab4.5_0000639g0010 Nicotiana tabacum HOM05D008666 ORTHO05D009871 8.7e-20 101.3 208 35.1
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 1.1e-19 100.9 206 35.9
Sopen12g006880 Solanum pennellii HOM05D008666 ORTHO05D009871 5.6e-19 98.6 202 37.1
Cc10_g08880 Coffea canephora HOM05D008666 ORTHO05D009871 1.6e-18 97.1 197 36.5
Potri.008G084200 Populus trichocarpa HOM05D008666 ORTHO05D009871 2.8e-18 96.3 184 34.2
Solyc12g013530.2 Solanum lycopersicum HOM05D008666 ORTHO05D009871 1.1e-17 94.4 200 35.0
HanXRQChr03g0075931 Helianthus annuus HOM05D008666 ORTHO05D009871 2.4e-17 93.2 192 35.4
CiPaw.11G176000 Carya illinoinensis HOM05D008666 ORTHO05D009871 3.1e-17 92.8 171 36.8
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 3.1e-17 92.8 202 34.2
Atru.chr2.2883 Acer truncatum HOM05D038199 ORTHO05D009871 4.0e-17 92.4 124 47.6
Atru.chr2.2828 Acer truncatum HOM05D038199 ORTHO05D009871 5.3e-17 92.0 131 45.0
FvH4_3g20890 Fragaria vesca HOM05D010293 ORTHO05D009871 3.4e-16 89.4 231 33.3
FAN11G0092 Fragaria x ananassa HOM05D010293 ORTHO05D009871 3.4e-16 89.4 231 33.3
COL.COLO4_09475 Corchorus olitorius HOM05D008666 ORTHO05D009871 4.5e-16 89.0 187 39.0
Rhsim04G0017800 Rhododendron simsii HOM05D008666 ORTHO05D009871 9.9e-16 87.8 215 34.4
Peaxi162Scf00000g00503 Petunia axillaris HOM05D008666 ORTHO05D009871 1.3e-15 87.4 191 32.5
FAN21G2602 Fragaria x ananassa HOM05D001272 ORTHO05D001843 2.4e-14 83.2 223 32.3
Manes.01G178300 Manihot esculenta HOM05D008666 ORTHO05D009871 4.2e-14 82.4 144 34.7
Thecc.07G071900 Theobroma cacao HOM05D008666 ORTHO05D009871 7.1e-14 81.6 169 39.6
CANSAT11G1747 Cannabis sativa HOM05D008666 ORTHO05D009871 9.3e-14 81.3 179 31.3
MD03G1219600 Malus domestica HOM05D010293 ORTHO05D009871 9.3e-14 81.3 214 33.6
Cpa.g.sc80.110 Carica papaya HOM05D048510 ORTHO05D009871 4.6e-13 79.0 230 30.4
QL08p018333 Quercus lobata HOM05D010293 ORTHO05D009871 1.0e-12 77.8 225 29.8
MSTRG.14377 Avicennia marina HOM05D008666 ORTHO05D009871 3.0e-12 76.3 192 29.2
AUR62026950 Chenopodium quinoa HOM05D014664 ORTHO05D009871 6.7e-12 75.1 193 29.5
AUR62043278 Chenopodium quinoa HOM05D014664 ORTHO05D009871 5.6e-11 72.0 190 30.0
Sc11g0008030 Simmondsia chinensis HOM05D014664 ORTHO05D009871 7.4e-11 71.6 203 31.0
QL08p018585 Quercus lobata HOM05D010293 ORTHO05D009871 1.6e-10 70.5 280 26.4
Prupe.4G189400 Prunus persica HOM05D010293 ORTHO05D009871 3.7e-10 69.3 137 35.0
vmacro09555 Vaccinium macrocarpon HOM05D008666 ORTHO05D009871 6.2e-10 68.6 182 29.1
QL93p2023_0014 Quercus lobata HOM05D010293 ORTHO05D009871 2.6e-08 63.2 94 41.5
Prupe.4G189500 Prunus persica HOM05D010293 ORTHO05D009871 3.4e-08 62.8 151 35.8
QL08p018535 Quercus lobata HOM05D010293 ORTHO05D009871 3.4e-08 62.8 107 35.5
Hund16095 Selenicereus undatus HOM05D014664 ORTHO05D009871 4.5e-08 62.4 134 32.8
Lsat_1_v5_gn_9_95760 Lactuca sativa HOM05D008666 ORTHO05D009871 5.8e-08 62.0 122 35.2
CSS0038280 Camellia sinensis var. sinensis HOM05D010293 ORTHO05D009871 1.0e-07 61.2 102 38.2
Sopen12g006860 Solanum pennellii HOM05D008666 ORTHO05D009871 2.2e-07 60.1 173 30.6
Nn1g06738 Nelumbo nucifera HOM05D008666 ORTHO05D009871 2.9e-07 59.7 92 39.1
PGSC0003DMG400008566 Solanum tuberosum HOM05D008666 ORTHO05D009871 3.8e-07 59.3 196 27.0
FAN25G3202 Fragaria x ananassa HOM05D010293 ORTHO05D009871 3.2e-06 56.2 144 31.9
Solyc12g013520.3 Solanum lycopersicum HOM05D008666 ORTHO05D009871 3.2e-06 56.2 168 29.8
PSO675G7014 Papaver somniferum HOM05D052810 ORTHO05D038495 4.2e-06 55.8 209 28.7
Haze_09524 Corylus avellana HOM05D010293 ORTHO05D009871 5.5e-06 55.5 164 30.5


User provided reference genes

Program Settings