Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10006345m.g Citrus clementina HOM05D000130 ORTHO05D000772 6.4e-41 170.2 82 100.0
Atru.chr1.579 Acer truncatum HOM05D000130 ORTHO05D000772 5.3e-11 70.9 51 62.7
Atru.chr1.578 Acer truncatum HOM05D000130 ORTHO05D000772 6.9e-11 70.5 51 62.7
CSS0033626 Camellia sinensis var. sinensis HOM05D000130 ORTHO05D000772 6.9e-11 70.5 61 50.8
Ciclev10005338m.g Citrus clementina HOM05D000130 ORTHO05D000772 6.9e-11 70.5 60 58.3
Thecc.07G154500 Theobroma cacao HOM05D000130 ORTHO05D000772 6.9e-11 70.5 55 60.0
CSS0024258 Camellia sinensis var. sinensis HOM05D000130 ORTHO05D000772 9.0e-11 70.1 61 50.8
CSS0037014 Camellia sinensis var. sinensis HOM05D000130 ORTHO05D000772 9.0e-11 70.1 61 50.8
CSS0048707 Camellia sinensis var. sinensis HOM05D000130 ORTHO05D000772 9.0e-11 70.1 57 54.4
Dinv35133 Davidia involucrata HOM05D000130 ORTHO05D000772 1.2e-10 69.7 56 62.5
Lj8C33T4 Lonicera japonica HOM05D000130 ORTHO05D000772 1.5e-10 69.3 57 56.1
CiPaw.03G099600 Carya illinoinensis HOM05D000130 ORTHO05D000772 2.0e-10 68.9 60 55.0
COL.COLO4_05149 Corchorus olitorius HOM05D000130 ORTHO05D000772 2.6e-10 68.6 56 58.9
Eucgr.A02853 Eucalyptus grandis HOM05D000130 ORTHO05D000772 2.6e-10 68.6 56 55.4
DCAR_031006 Daucus carota HOM05D000130 ORTHO05D000772 3.4e-10 68.2 56 55.4
Duzib213G0899 Durio zibethinus HOM05D000130 ORTHO05D000772 4.5e-10 67.8 60 55.0
Atru.chr1.575 Acer truncatum HOM05D000130 ORTHO05D000772 5.8e-10 67.4 56 48.2
Migut.F00400 Erythranthe guttata HOM05D000130 ORTHO05D000772 5.8e-10 67.4 60 53.3
CANSAT56G0956 Cannabis sativa HOM05D000130 ORTHO05D000772 7.6e-10 67.0 57 50.9
Lj8C33T1 Lonicera japonica HOM05D000130 ORTHO05D000772 1.0e-09 66.6 56 55.4
Dinv28511 Davidia involucrata HOM05D000130 ORTHO05D000772 1.3e-09 66.2 60 53.3
Dinv28512 Davidia involucrata HOM05D000130 ORTHO05D000772 1.3e-09 66.2 60 53.3
Duzib187G0316 Durio zibethinus HOM05D000130 ORTHO05D000772 1.3e-09 66.2 55 58.2
Peaxi162Scf00225g00034 Petunia axillaris HOM05D000130 ORTHO05D000772 1.3e-09 66.2 56 53.6
TWI59G0740 Tripterygium wilfordii HOM05D000130 ORTHO05D000772 1.3e-09 66.2 60 56.7
Prupe.2G286700 Prunus persica HOM05D000130 ORTHO05D000772 2.2e-09 65.5 56 53.6
TWI39G0717 Tripterygium wilfordii HOM05D000130 ORTHO05D000772 2.2e-09 65.5 60 46.7
COL.COLO4_12594 Corchorus olitorius HOM05D000130 ORTHO05D000772 2.9e-09 65.1 61 54.1
Duzib084G1043 Durio zibethinus HOM05D000130 ORTHO05D000772 2.9e-09 65.1 57 47.4
Sopen01g041700 Solanum pennellii HOM05D000130 ORTHO05D000772 2.9e-09 65.1 57 52.6
Atru.chr1.577 Acer truncatum HOM05D000130 ORTHO05D000772 3.8e-09 64.7 57 54.4
Cpa.g.sc4.186 Carica papaya HOM05D000130 ORTHO05D000772 3.8e-09 64.7 49 55.1
Sabra15G0148700 Salix brachista HOM05D000130 ORTHO05D000772 5.0e-09 64.3 51 54.9
Eucgr.A02852 Eucalyptus grandis HOM05D000130 ORTHO05D000772 6.5e-09 63.9 56 53.6
Eucgr.A02855 Eucalyptus grandis HOM05D000130 ORTHO05D000772 6.5e-09 63.9 56 51.8
Lj2g0022643 Lotus japonicus HOM05D000130 ORTHO05D000772 6.5e-09 63.9 57 50.9
Nitab4.5_0009403g0030 Nicotiana tabacum HOM05D000130 ORTHO05D000772 6.5e-09 63.9 57 56.1
PSO478G5099 Papaver somniferum HOM05D000130 ORTHO05D000772 6.5e-09 63.9 60 46.7
RcHm_v2.0_Chr1g0376621 Rosa chinensis HOM05D000130 ORTHO05D000772 6.5e-09 63.9 56 55.4
Thecc.03G166200 Theobroma cacao HOM05D000130 ORTHO05D000772 6.5e-09 63.9 60 45.0
TAR375G0884 Trochodendron aralioides HOM05D000130 ORTHO05D000772 6.5e-09 63.9 62 46.8
TAR622G0954 Trochodendron aralioides HOM05D000130 ORTHO05D000772 6.5e-09 63.9 62 46.8
Eucgr.A02849 Eucalyptus grandis HOM05D000130 ORTHO05D000772 8.4e-09 63.5 67 44.8
Potri.015G137100 Populus trichocarpa HOM05D000130 ORTHO05D000772 8.4e-09 63.5 60 50.0
Gohir.D12G263200 Gossypium hirsutum HOM05D000130 ORTHO05D000772 1.1e-08 63.2 56 48.2
Gorai.008G282100 Gossypium raimondii HOM05D000130 ORTHO05D000772 1.1e-08 63.2 56 48.2
QL12p038729 Quercus lobata HOM05D000130 ORTHO05D000772 1.1e-08 63.2 60 48.3
QL12p038778 Quercus lobata HOM05D000130 ORTHO05D000772 1.1e-08 63.2 60 51.7
QL12p038812 Quercus lobata HOM05D000130 ORTHO05D000772 1.1e-08 63.2 52 53.8
TAR622G0610 Trochodendron aralioides HOM05D000130 ORTHO05D000772 1.1e-08 63.2 62 46.8
Hma1.2p1_0488F.1_g163890 Hydrangea macrophylla HOM05D000130 ORTHO05D000772 1.4e-08 62.8 56 50.0
Lalb_Chr19g0131191 Lupinus albus HOM05D000130 ORTHO05D000772 1.4e-08 62.8 58 48.3
Nitab4.5_0000245g0060 Nicotiana tabacum HOM05D000130 ORTHO05D000772 1.4e-08 62.8 55 56.4
Solyc07g040890.1 Solanum lycopersicum HOM05D000130 ORTHO05D000772 1.4e-08 62.8 58 48.3
PGSC0003DMG400006709 Solanum tuberosum HOM05D000130 ORTHO05D000772 1.4e-08 62.8 58 46.6
TAR375G0822 Trochodendron aralioides HOM05D000130 ORTHO05D000772 1.4e-08 62.8 47 59.6
TAR375G0985 Trochodendron aralioides HOM05D000130 ORTHO05D000772 1.4e-08 62.8 51 56.9
Manes.14G031400 Manihot esculenta HOM05D000130 ORTHO05D000772 1.9e-08 62.4 57 47.4
Psat5g024880 Pisum sativum HOM05D000130 ORTHO05D000772 1.9e-08 62.4 57 50.9
QL12p038758 Quercus lobata HOM05D000130 ORTHO05D000772 1.9e-08 62.4 53 52.8
Solyc01g098140.4 Solanum lycopersicum HOM05D000130 ORTHO05D000772 1.9e-08 62.4 80 40.0
PGSC0003DMG400022493 Solanum tuberosum HOM05D000130 ORTHO05D000772 1.9e-08 62.4 57 50.9
VMungo0464G0643 Vigna mungo HOM05D000130 ORTHO05D000772 1.9e-08 62.4 56 51.8
Actinidia31797 Actinidia chinensis HOM05D000130 ORTHO05D000772 2.5e-08 62.0 57 49.1
Prupe.2G286500 Prunus persica HOM05D000130 ORTHO05D000772 2.5e-08 62.0 53 54.7
QL12p038740 Quercus lobata HOM05D000130 ORTHO05D000772 2.5e-08 62.0 60 50.0
QL12p038796 Quercus lobata HOM05D000130 ORTHO05D000772 2.5e-08 62.0 56 50.0
TPR.G26587 Trifolium pratense HOM05D000130 ORTHO05D000772 2.5e-08 62.0 57 50.9
TAR622G0316 Trochodendron aralioides HOM05D000866 ORTHO05D000673 2.5e-08 62.0 56 50.0
arahy.Tifrunner.gnm1.ann1.WRSV9R Arachis hypogaea HOM05D000130 ORTHO05D000772 3.2e-08 61.6 56 50.0
CARHR275970 Cardamine hirsuta HOM05D000130 ORTHO05D000772 3.2e-08 61.6 56 50.0
Duzib084G1214 Durio zibethinus HOM05D000130 ORTHO05D000772 3.2e-08 61.6 60 50.0
QL12p038662 Quercus lobata HOM05D000130 ORTHO05D000772 3.2e-08 61.6 53 50.9
TAR622G1002 Trochodendron aralioides HOM05D000130 ORTHO05D000772 3.2e-08 61.6 47 57.4
CAN.G134.198 Capsicum annuum HOM05D000130 ORTHO05D000772 4.2e-08 61.2 57 49.1
Glyma.16G201000 Glycine max HOM05D000130 ORTHO05D000772 4.2e-08 61.2 51 51.0
Peaxi162Scf00089g00084 Petunia axillaris HOM05D000130 ORTHO05D000772 4.2e-08 61.2 57 50.9
Peaxi162Scf00089g00933 Petunia axillaris HOM05D000130 ORTHO05D000772 4.2e-08 61.2 57 52.6
Sopen07g019930 Solanum pennellii HOM05D000130 ORTHO05D000772 4.2e-08 61.2 58 48.3
PGSC0003DMG400022492 Solanum tuberosum HOM05D000130 ORTHO05D000772 4.2e-08 61.2 57 50.9
Thecc.01G372400 Theobroma cacao HOM05D000130 ORTHO05D000772 4.2e-08 61.2 68 45.6
CAN.G134.199 Capsicum annuum HOM05D000130 ORTHO05D000772 5.5e-08 60.8 61 47.5
COL.COLO4_14221 Corchorus olitorius HOM05D000130 ORTHO05D000772 5.5e-08 60.8 57 43.9
FAN01G0532 Fragaria x ananassa HOM05D000130 ORTHO05D000772 5.5e-08 60.8 56 50.0
Glyma.09G149601 Glycine max HOM05D000130 ORTHO05D000772 5.5e-08 60.8 56 48.2
Lj2g0015215 Lotus japonicus HOM05D000130 ORTHO05D000772 5.5e-08 60.8 56 51.8
Medtr6g464120 Medicago truncatula HOM05D000130 ORTHO05D000772 5.5e-08 60.8 76 43.4
Sopen01g041710 Solanum pennellii HOM05D000130 ORTHO05D000772 5.5e-08 60.8 57 49.1
CSS0042012 Camellia sinensis var. sinensis HOM05D000130 ORTHO05D000772 7.1e-08 60.5 56 46.4
CAN.G871.6 Capsicum annuum HOM05D000130 ORTHO05D000772 7.1e-08 60.5 60 46.7
Ca_05168_v3 Cicer arietinum L. HOM05D000130 ORTHO05D000772 7.1e-08 60.5 56 51.8
FvH4_7g28660 Fragaria vesca HOM05D000130 ORTHO05D000772 7.1e-08 60.5 56 48.2
FAN03G1019 Fragaria x ananassa HOM05D000130 ORTHO05D000772 7.1e-08 60.5 56 48.2
FAN03G2696 Fragaria x ananassa HOM05D000130 ORTHO05D000772 7.1e-08 60.5 56 48.2
FAN06G2044 Fragaria x ananassa HOM05D000130 ORTHO05D000772 7.1e-08 60.5 56 48.2
TAR375G1002 Trochodendron aralioides HOM05D000130 ORTHO05D000772 7.1e-08 60.5 62 45.2
Cfa001830 Carpinus fangiana HOM05D000130 ORTHO05D000772 9.3e-08 60.1 75 37.3
Cfa008193 Carpinus fangiana HOM05D000130 ORTHO05D000772 9.3e-08 60.1 48 54.2
AUR62016069 Chenopodium quinoa HOM05D000130 ORTHO05D000772 9.3e-08 60.1 51 52.9
COL.COLO4_14222 Corchorus olitorius HOM05D000130 ORTHO05D000772 9.3e-08 60.1 56 46.4
Eucgr.A02854 Eucalyptus grandis HOM05D000130 ORTHO05D000772 9.3e-08 60.1 56 50.0
Peaxi162Scf00089g00092 Petunia axillaris HOM05D000130 ORTHO05D000772 9.3e-08 60.1 45 62.2
Atru.chr1.568 Acer truncatum HOM05D000130 ORTHO05D000772 1.2e-07 59.7 56 55.4
Phvul.004G123900 Phaseolus vulgaris HOM05D000130 ORTHO05D000772 1.2e-07 59.7 56 51.8
Eucgr.A02850 Eucalyptus grandis HOM05D000130 ORTHO05D000772 1.6e-07 59.3 56 50.0
arahy.Tifrunner.gnm1.ann1.UCUY7J Arachis hypogaea HOM05D000130 ORTHO05D000772 2.1e-07 58.9 74 40.5
Gohir.D11G087300 Gossypium hirsutum HOM05D000130 ORTHO05D000772 2.1e-07 58.9 57 50.9
Gohir.D11G087440 Gossypium hirsutum HOM05D000130 ORTHO05D000772 2.1e-07 58.9 57 50.9
Gorai.007G093200 Gossypium raimondii HOM05D000130 ORTHO05D000772 2.1e-07 58.9 57 50.9
PGR042G2816 Punica granatum HOM05D000130 ORTHO05D000772 2.1e-07 58.9 62 40.3
QL12p038785 Quercus lobata HOM05D000130 ORTHO05D006874 2.1e-07 58.9 60 46.7
THA.LOC104800395 Tarenaya hassleriana HOM05D000130 ORTHO05D000772 2.1e-07 58.9 56 46.4
THA.LOC104808000 Tarenaya hassleriana HOM05D000130 ORTHO05D000772 2.1e-07 58.9 56 46.4
Haze_06766 Corylus avellana HOM05D000130 ORTHO05D000772 2.7e-07 58.5 56 46.4
Haze_13861 Corylus avellana HOM05D000130 ORTHO05D000772 2.7e-07 58.5 56 48.2
Haze_16723 Corylus avellana HOM05D000130 ORTHO05D000772 2.7e-07 58.5 56 46.4
Duzib138G0397 Durio zibethinus HOM05D000130 ORTHO05D000772 2.7e-07 58.5 57 49.1
FAN06G4787 Fragaria x ananassa HOM05D000130 ORTHO05D000772 2.7e-07 58.5 56 46.4
Gohir.A11G083200 Gossypium hirsutum HOM05D000130 ORTHO05D000772 2.7e-07 58.5 56 51.8
QL12p038666 Quercus lobata HOM05D000130 ORTHO05D000772 2.7e-07 58.5 60 45.0
QL12p038672 Quercus lobata HOM05D000130 ORTHO05D000772 2.7e-07 58.5 52 50.0
Cfa008192 Carpinus fangiana HOM05D000130 ORTHO05D000772 3.5e-07 58.2 48 54.2
Glyma.09G149400 Glycine max HOM05D000130 ORTHO05D000772 3.5e-07 58.2 62 45.2
QL09p019720 Quercus lobata HOM05D000130 ORTHO05D000772 3.5e-07 58.2 53 50.9
Actinidia03095 Actinidia chinensis HOM05D000130 ORTHO05D000772 4.6e-07 57.8 57 43.9
arahy.Tifrunner.gnm1.ann1.VPZY89 Arachis hypogaea HOM05D000130 ORTHO05D000772 4.6e-07 57.8 56 50.0
Cfa008194 Carpinus fangiana HOM05D000130 ORTHO05D000772 4.6e-07 57.8 48 52.1
PGSC0003DMG400006708 Solanum tuberosum HOM05D000130 ORTHO05D000772 4.6e-07 57.8 58 43.1
Nn6g34335 Nelumbo nucifera HOM05D000130 ORTHO05D000772 6.1e-07 57.4 57 42.1
Oeu041500.1 Olea europaea HOM05D000130 ORTHO05D000772 6.1e-07 57.4 61 42.6
PSO384G0016 Papaver somniferum HOM05D000130 ORTHO05D000772 6.1e-07 57.4 59 45.8
Sp2g25380 Schrenkiella parvula HOM05D000130 ORTHO05D000772 6.1e-07 57.4 56 44.6
Cc08_g02660 Coffea canephora HOM05D000130 ORTHO05D000772 7.9e-07 57.0 60 43.3
Psat0s4061g0120 Pisum sativum HOM05D000130 ORTHO05D000772 7.9e-07 57.0 57 49.1
SalBow4G1405 Salvia bowleyana HOM05D000130 ORTHO05D000772 7.9e-07 57.0 60 41.7
TAR375G0169 Trochodendron aralioides HOM05D000130 ORTHO05D000772 7.9e-07 57.0 56 44.6
Nn1g01264 Nelumbo nucifera HOM05D000130 ORTHO05D000772 1.0e-06 56.6 56 48.2
QL12p038656 Quercus lobata HOM05D000130 ORTHO05D000772 1.0e-06 56.6 60 41.7
SalBow4G1300 Salvia bowleyana HOM05D000130 ORTHO05D000772 1.0e-06 56.6 60 41.7
SalBow4G2215 Salvia bowleyana HOM05D000130 ORTHO05D000772 1.0e-06 56.6 60 41.7
SalBow4G3244 Salvia bowleyana HOM05D000130 ORTHO05D000772 1.0e-06 56.6 60 40.0
TPR.G26588 Trifolium pratense HOM05D000130 ORTHO05D000772 1.0e-06 56.6 56 44.6
BcaC04g23426 Brassica carinata HOM05D000130 ORTHO05D000772 1.3e-06 56.2 57 45.6
C09p08440 Brassica napus HOM05D000130 ORTHO05D000772 1.3e-06 56.2 57 45.6
BolC9t53754H Brassica oleracea HOM05D000130 ORTHO05D000772 1.3e-06 56.2 57 45.6
PSO384G4084 Papaver somniferum HOM05D000130 ORTHO05D000772 1.3e-06 56.2 56 50.0
EL10Ac3g05752 Beta vulgaris HOM05D000130 ORTHO05D000772 1.8e-06 55.8 48 47.9
A09p07550 Brassica napus HOM05D000130 ORTHO05D000772 1.8e-06 55.8 57 45.6
BraA09t36409Z Brassica rapa HOM05D000130 ORTHO05D000772 1.8e-06 55.8 57 45.6
Cc08_g02650 Coffea canephora HOM05D000130 ORTHO05D000772 1.8e-06 55.8 60 41.7
QL12p038653 Quercus lobata HOM05D000130 ORTHO05D000772 1.8e-06 55.8 61 41.0
Sed0021081 Sechium edule HOM05D000130 ORTHO05D000772 1.8e-06 55.8 56 46.4
Carub.0001s4274 Capsella rubella HOM05D000130 ORTHO05D000772 2.3e-06 55.5 55 47.3
FvH4_7g12500 Fragaria vesca HOM05D000130 ORTHO05D000772 2.3e-06 55.5 57 38.6
FAN06G0117 Fragaria x ananassa HOM05D000130 ORTHO05D000772 2.3e-06 55.5 57 38.6
FAN06G1547 Fragaria x ananassa HOM05D000130 ORTHO05D000772 2.3e-06 55.5 57 38.6
HanXRQChr13g0425541 Helianthus annuus HOM05D000130 ORTHO05D000772 2.3e-06 55.5 60 46.7
Nn8g40793 Nelumbo nucifera HOM05D000130 ORTHO05D000772 3.0e-06 55.1 71 40.8
AT5G62180 Arabidopsis thaliana HOM05D000130 ORTHO05D000772 3.9e-06 54.7 62 43.5
Cc08_g02680 Coffea canephora HOM05D000130 ORTHO05D000772 3.9e-06 54.7 57 43.9
COL.COLO4_30000 Corchorus olitorius HOM05D000130 ORTHO05D000772 3.9e-06 54.7 59 47.5
Sc25g0000270 Simmondsia chinensis HOM05D000130 ORTHO05D000772 3.9e-06 54.7 58 48.3
TAR375G0015 Trochodendron aralioides HOM05D000130 ORTHO05D000772 3.9e-06 54.7 62 43.5
TAR629G1162 Trochodendron aralioides HOM05D000130 ORTHO05D000772 3.9e-06 54.7 56 42.9
Atru.chr1.576 Acer truncatum HOM05D000130 ORTHO05D000772 5.1e-06 54.3 47 55.3
CiPaw.01G259300 Carya illinoinensis HOM05D000130 ORTHO05D000772 5.1e-06 54.3 56 44.6
Cc08_g02730 Coffea canephora HOM05D000130 ORTHO05D000772 5.1e-06 54.3 53 47.2
Nn8g40796 Nelumbo nucifera HOM05D000130 ORTHO05D000772 5.1e-06 54.3 56 46.4
Oeu026240.1 Olea europaea HOM05D000130 ORTHO05D000772 5.1e-06 54.3 57 45.6
Potri.001G466166 Populus trichocarpa HOM05D000130 ORTHO05D000772 5.1e-06 54.3 54 42.6
TAR375G0597 Trochodendron aralioides HOM05D000130 ORTHO05D000772 5.1e-06 54.3 62 43.5
CSS0043020 Camellia sinensis var. sinensis HOM05D000130 ORTHO05D000772 6.7e-06 53.9 53 50.9
Ciclev10007129m.g Citrus clementina HOM05D000130 ORTHO05D000772 6.7e-06 53.9 45 53.3
Thhalv10005595m.g Eutrema salsugineum HOM05D000130 ORTHO05D000772 6.7e-06 53.9 55 47.3
FvH4_7g28650 Fragaria vesca HOM05D000130 ORTHO05D000772 6.7e-06 53.9 56 48.2
FAN01G0830 Fragaria x ananassa HOM05D000130 ORTHO05D000772 6.7e-06 53.9 56 48.2
Lalb_Chr19g0131201 Lupinus albus HOM05D000130 ORTHO05D000772 6.7e-06 53.9 56 48.2
Prupe.2G286600 Prunus persica HOM05D000130 ORTHO05D000772 6.7e-06 53.9 56 46.4
CANSAT21G2001 Cannabis sativa HOM05D000130 ORTHO05D000772 8.7e-06 53.5 57 43.9
Potri.001G466300 Populus trichocarpa HOM05D000130 ORTHO05D000772 8.7e-06 53.5 54 42.6
Potri.001G466400 Populus trichocarpa HOM05D000130 ORTHO05D000772 8.7e-06 53.5 46 47.8
QL12p038727 Quercus lobata HOM05D000130 ORTHO05D000772 8.7e-06 53.5 56 42.9


User provided reference genes

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