Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10005791m.g Citrus clementina HOM05D007349 ORTHO05D009317 1.4e-128 463.0 232 100.0
Cfa011815 Carpinus fangiana HOM05D007349 ORTHO05D009317 5.8e-55 218.4 237 54.4
CiPaw.01G123800 Carya illinoinensis HOM05D007349 ORTHO05D009317 3.8e-54 215.7 231 52.8
Dinv29576 Davidia involucrata HOM05D007349 ORTHO05D009317 9.3e-53 211.1 234 52.6
Potri.003G177900 Populus trichocarpa HOM05D007349 ORTHO05D009317 1.2e-52 210.7 281 49.8
Dinv29581 Davidia involucrata HOM05D007349 ORTHO05D009317 6.0e-52 208.4 235 54.0
QL06p023778 Quercus lobata HOM05D007349 ORTHO05D009317 6.0e-52 208.4 257 49.4
Hma1.2p1_2958F.1_g330790 Hydrangea macrophylla HOM05D007349 ORTHO05D009317 3.9e-51 205.7 237 54.4
GSVIVG01029086001 Vitis vinifera HOM05D007349 ORTHO05D009317 6.6e-51 204.9 233 51.5
Sabra03G0130400 Salix brachista HOM05D007349 ORTHO05D009317 3.3e-50 202.6 285 47.7
TWI09G1137 Tripterygium wilfordii HOM05D007349 ORTHO05D009317 4.3e-50 202.2 243 48.6
Manes.03G149400 Manihot esculenta HOM05D007349 ORTHO05D009317 1.6e-49 200.3 245 49.0
Duzib212G0593 Durio zibethinus HOM05D007349 ORTHO05D009317 4.8e-49 198.7 237 51.5
Thecc.04G207000 Theobroma cacao HOM05D007349 ORTHO05D009317 6.2e-49 198.4 237 53.2
Cpa.g.sc59.118 Carica papaya HOM05D007349 ORTHO05D009317 3.4e-47 192.6 240 52.1
ClCG05G003470 Citrullus lanatus HOM05D007349 ORTHO05D009317 7.6e-47 191.4 241 50.2
Sed0005273 Sechium edule HOM05D007349 ORTHO05D009317 1.3e-46 190.7 240 48.3
arahy.Tifrunner.gnm1.ann1.FV8RA9 Arachis hypogaea HOM05D007349 ORTHO05D009317 2.9e-46 189.5 245 51.0
CsaV3_3G011130 Cucumis sativus L. HOM05D007349 ORTHO05D009317 1.2e-44 184.1 240 47.5
CSS0029747 Camellia sinensis var. sinensis HOM05D007349 ORTHO05D009317 6.0e-44 181.8 242 48.3
Gohir.A09G052212 Gossypium hirsutum HOM05D007349 ORTHO05D009317 3.9e-43 179.1 241 49.4
Gorai.006G056500 Gossypium raimondii HOM05D007349 ORTHO05D009317 3.9e-43 179.1 241 49.4
Ca_10404_v3 Cicer arietinum L. HOM05D007349 ORTHO05D009317 5.1e-43 178.7 238 47.9
CANSAT78G2317 Cannabis sativa HOM05D007349 ORTHO05D009317 1.9e-42 176.8 238 50.4
Lj5g0019311 Lotus japonicus HOM05D007349 ORTHO05D009317 2.5e-42 176.4 235 47.7
Gohir.D09G052924 Gossypium hirsutum HOM05D007349 ORTHO05D009317 9.6e-42 174.5 241 48.5
Lalb_Chr21g0312631 Lupinus albus HOM05D007349 ORTHO05D009317 9.6e-42 174.5 242 47.5
Medtr1g090010 Medicago truncatula HOM05D007349 ORTHO05D009317 3.7e-41 172.6 234 46.6
Psat0s3951g0040 Pisum sativum HOM05D007349 ORTHO05D009317 6.2e-41 171.8 235 46.8
Nn3g19440 Nelumbo nucifera HOM05D007349 ORTHO05D009317 1.4e-40 170.6 236 49.2
Cc03_g07560 Coffea canephora HOM05D007349 ORTHO05D009317 1.2e-39 167.5 236 45.3
Aqoxy5G00063 Aquilegia oxysepala HOM05D007349 ORTHO05D009317 9.9e-39 164.5 240 44.2
Phvul.007G134400 Phaseolus vulgaris HOM05D007349 ORTHO05D009317 2.9e-38 162.9 245 45.7
Nitab4.5_0008389g0020 Nicotiana tabacum HOM05D007349 ORTHO05D009317 3.8e-38 162.5 230 44.3
RcHm_v2.0_Chr4g0385541 Rosa chinensis HOM05D007349 ORTHO05D009317 3.8e-38 162.5 237 45.1
MELO3C006324.2 Cucumis melo HOM05D007349 ORTHO05D009317 6.4e-38 161.8 251 43.0
Eucgr.H02845 Eucalyptus grandis HOM05D007349 ORTHO05D009317 8.4e-38 161.4 255 42.7
SalBow3G0646 Salvia bowleyana HOM05D007349 ORTHO05D009317 2.4e-37 159.8 229 45.0
MBI07_g23672_MAGBIO Magnolia biondii HOM05D007349 ORTHO05D009317 5.5e-37 158.7 243 43.6
VMungo0720G2898 Vigna mungo HOM05D007349 ORTHO05D009317 5.5e-37 158.7 234 44.9
Haze_11590 Corylus avellana HOM05D007349 ORTHO05D009317 1.6e-36 157.1 168 53.0
HanXRQChr07g0185641 Helianthus annuus HOM05D007349 ORTHO05D009317 1.6e-36 157.1 232 41.8
Rhsim09G0053700 Rhododendron simsii HOM05D007349 ORTHO05D009317 1.6e-36 157.1 242 45.9
THA.LOC104808722 Tarenaya hassleriana HOM05D007349 ORTHO05D009317 4.6e-36 155.6 264 41.7
RcHm_v2.0_Chr6g0244431 Rosa chinensis HOM05D007349 ORTHO05D009317 6.0e-36 155.2 230 43.5
MD04G1004500 Malus domestica HOM05D007349 ORTHO05D009317 3.0e-35 152.9 240 42.9
PGSC0003DMG400016859 Solanum tuberosum HOM05D007349 ORTHO05D009317 5.1e-35 152.1 230 42.6
Oeu026866.1 Olea europaea HOM05D007349 ORTHO05D009317 6.7e-35 151.8 276 37.0
DCAR_024489 Daucus carota HOM05D007349 ORTHO05D009317 9.6e-34 147.9 234 41.9
TPR.G13407 Trifolium pratense HOM05D007349 ORTHO05D009317 9.6e-34 147.9 261 39.1
PGR142G2055 Punica granatum HOM05D007349 ORTHO05D009317 1.3e-33 147.5 241 44.8
BolC4t25802H Brassica oleracea HOM05D007349 ORTHO05D009317 6.2e-33 145.2 267 42.3
FAN12G2695 Fragaria x ananassa HOM05D007349 ORTHO05D009317 8.2e-33 144.8 234 42.3
arahy.Tifrunner.gnm1.ann1.X6WBXQ Arachis hypogaea HOM05D007349 ORTHO05D009317 1.1e-32 144.4 174 51.7
BcaB03g16060 Brassica carinata HOM05D007349 ORTHO05D009317 1.1e-32 144.4 264 42.0
FvH4_4g00420 Fragaria vesca HOM05D007349 ORTHO05D009317 1.1e-32 144.4 234 42.3
BcaC02g09398 Brassica carinata HOM05D007349 ORTHO05D009317 1.8e-32 143.7 270 42.2
Sp7g11450 Schrenkiella parvula HOM05D007349 ORTHO05D009317 2.4e-32 143.3 272 39.0
C04p42240 Brassica napus HOM05D007349 ORTHO05D009317 4.0e-32 142.5 269 41.3
CARHR219460 Cardamine hirsuta HOM05D007349 ORTHO05D009317 5.3e-32 142.1 271 38.0
Glyma.10G192600 Glycine max HOM05D007349 ORTHO05D009317 6.9e-32 141.7 241 44.0
Lsat_1_v5_gn_6_59420 Lactuca sativa HOM05D007349 ORTHO05D009317 2.6e-31 139.8 214 43.9
PSO210G4925 Papaver somniferum HOM05D007349 ORTHO05D009317 2.6e-31 139.8 248 41.1
FAN22G0302 Fragaria x ananassa HOM05D007349 ORTHO05D009317 2.9e-30 136.3 246 40.2
Aa31LG9G3970 Aethionema arabicum HOM05D007349 ORTHO05D009317 2.5e-29 133.3 266 41.0
Migut.N00367 Erythranthe guttata HOM05D007349 ORTHO05D009317 3.2e-29 132.9 237 38.4
Thhalv10026053m.g Eutrema salsugineum HOM05D007349 ORTHO05D009317 5.5e-29 132.1 269 41.3
A04p08500 Brassica napus HOM05D007349 ORTHO05D009317 1.2e-28 131.0 269 41.3
Prupe.1G004200 Prunus persica HOM05D007349 ORTHO05D009317 6.0e-28 128.6 285 36.5
AL7G42820 Arabidopsis lyrata HOM05D007349 ORTHO05D009317 1.0e-27 127.9 268 37.7
Nitab4.5_0000676g0280 Nicotiana tabacum HOM05D007349 ORTHO05D009317 1.0e-27 127.9 215 40.5
BraA04t16541Z Brassica rapa HOM05D007349 ORTHO05D009317 1.8e-27 127.1 261 37.9
AT4G13690 Arabidopsis thaliana HOM05D007349 ORTHO05D009317 7.4e-26 121.7 264 36.7
ATR0329G016 Amborella trichopoda HOM05D007349 ORTHO05D009317 1.6e-25 120.6 233 39.5
Carub.0007s2878 Capsella rubella HOM05D007349 ORTHO05D009317 2.2e-25 120.2 272 37.5
EL10Ac3g06899 Beta vulgaris HOM05D007349 ORTHO05D009317 5.3e-24 115.5 236 36.4
Ah.13g075780 Amaranthus hybridus HOM05D007349 ORTHO05D009317 9.0e-24 114.8 238 34.9
Hund19205 Selenicereus undatus HOM05D007349 ORTHO05D009317 2.6e-23 113.2 238 34.9
TAR103G0001 Trochodendron aralioides HOM05D007349 ORTHO05D009317 1.0e-22 111.3 80 65.0
Actinidia33026 Actinidia chinensis HOM05D007349 ORTHO05D009317 4.2e-21 105.9 150 47.3
ECA248G1485 Erigeron canadensis HOM05D007349 ORTHO05D009317 2.7e-20 103.2 234 32.9
SGA_v2.0_scaffold31G12592 Striga asiatica HOM05D007349 ORTHO05D009317 3.9e-19 99.4 219 36.1
MSTRG.21955 Avicennia marina HOM05D007349 ORTHO05D009317 3.3e-18 96.3 124 46.0
Glyma.20G197951 Glycine max HOM05D007349 ORTHO05D009317 2.2e-17 93.6 83 61.4
AUR62012020 Chenopodium quinoa HOM05D007349 ORTHO05D009317 4.1e-16 89.4 201 32.8
Peaxi162Scf00938g00312 Petunia axillaris HOM05D007349 ORTHO05D009317 6.9e-16 88.6 80 51.2
vmacro00487 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 6.9e-16 88.6 192 39.6
Sopen12g033040 Solanum pennellii HOM05D007349 ORTHO05D009317 2.6e-15 86.7 77 53.2
Solyc12g098220.2 Solanum lycopersicum HOM05D007349 ORTHO05D009317 1.0e-14 84.7 77 51.9
unitig_8.g4490 Utricularia gibba HOM05D007349 ORTHO05D009317 1.3e-14 84.3 170 32.9
AUR62015355 Chenopodium quinoa HOM05D007349 ORTHO05D009317 1.1e-13 81.3 81 46.9
Dinv29577 Davidia involucrata HOM05D007349 ORTHO05D009317 1.2e-12 77.8 121 43.0
PSO832G0714 Papaver somniferum HOM05D007349 ORTHO05D009317 2.7e-12 76.6 214 33.2
Sopen00g011340 Solanum pennellii HOM05D007349 ORTHO05D009317 7.9e-12 75.1 143 40.6
Zm00001eb046010 Zea mays HOM05D007349 ORTHO05D009317 3.0e-11 73.2 97 42.3
Peaxi162Scf00938g00313 Petunia axillaris HOM05D007349 ORTHO05D009317 8.8e-11 71.6 142 38.0
Glyma.20G197900 Glycine max HOM05D007349 ORTHO05D009317 7.4e-10 68.6 150 38.0
SHI01057 Sapria himalayana HOM05D007349 ORTHO05D009317 1.7e-09 67.4 84 46.4
TAR636G1730 Trochodendron aralioides HOM05D007349 ORTHO05D009317 3.7e-09 66.2 41 68.3
Medtr6g023085 Medicago truncatula HOM05D007349 ORTHO05D009317 1.3e-06 57.8 101 38.6
Pp3c2_23160 Physcomitrium patens HOM05D007349 ORTHO05D009317 1.7e-06 57.4 74 41.9


User provided reference genes

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