Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 3.7e-149 531.6 275 100.0
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 1.0e-119 433.7 280 79.6
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 8.8e-119 430.6 279 79.6
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 2.0e-118 429.5 276 80.1
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 3.4e-118 428.7 276 79.0
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 4.8e-117 424.9 269 79.2
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 8.3e-117 424.1 275 77.8
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 7.0e-116 421.0 271 78.6
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 2.2e-114 416.0 273 78.0
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 5.0e-114 414.8 274 78.1
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 6.5e-114 414.5 277 77.3
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 3.2e-113 412.1 268 79.1
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 5.5e-113 411.4 269 77.0
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.1e-112 409.5 274 77.0
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 3.6e-112 408.7 270 76.3
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 6.1e-112 407.9 274 77.0
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.0e-111 407.1 274 76.3
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 3.0e-111 405.6 269 76.2
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 3.0e-111 405.6 270 75.6
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 3.0e-111 405.6 272 76.1
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 5.2e-111 404.8 281 73.7
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 2.0e-110 402.9 269 75.8
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 2.0e-110 402.9 272 75.7
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.6e-110 402.5 274 76.3
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 7.5e-110 401.0 270 75.2
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 7.5e-110 401.0 276 75.7
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 9.8e-110 400.6 272 75.0
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 1.3e-109 400.2 274 71.9
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.3e-109 400.2 269 75.5
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 2.2e-109 399.4 270 74.8
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 2.8e-109 399.1 272 73.5
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 4.9e-109 398.3 270 73.0
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.8e-108 396.4 269 73.6
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 2.4e-108 396.0 278 75.2
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 2.4e-108 396.0 269 71.4
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 5.4e-108 394.8 270 73.7
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 9.1e-108 394.0 274 71.9
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 2.0e-107 392.9 273 72.9
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 4.5e-107 391.7 274 71.5
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 1.3e-106 390.2 273 73.3
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 2.3e-106 389.4 274 70.4
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 2.3e-106 389.4 272 72.4
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 2.3e-106 389.4 270 70.7
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 2.9e-106 389.0 279 72.0
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 3.8e-106 388.7 272 71.7
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 5.0e-106 388.3 274 71.2
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 5.0e-106 388.3 269 72.1
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 6.6e-106 387.9 272 73.5
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 8.6e-106 387.5 272 74.6
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 2.5e-105 386.0 274 71.2
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 3.3e-105 385.6 274 70.1
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 9.5e-105 384.0 277 72.9
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 1.2e-104 383.6 277 72.6
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 1.2e-104 383.6 272 70.6
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 1.6e-104 383.3 274 70.4
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 2.8e-104 382.5 274 70.8
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 4.7e-104 381.7 273 70.0
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 1.4e-103 380.2 273 71.1
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.4e-103 380.2 274 69.7
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 1.4e-103 380.2 274 72.6
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 1.4e-103 380.2 269 71.4
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 5.2e-103 378.3 273 69.6
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 5.2e-103 378.3 273 69.6
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 5.2e-103 378.3 261 72.0
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 6.8e-103 377.9 269 71.0
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 8.9e-103 377.5 328 61.9
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 4.4e-102 375.2 273 69.6
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 9.8e-102 374.0 275 69.8
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 9.8e-102 374.0 274 67.9
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 3.7e-101 372.1 274 72.3
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 2.4e-100 369.4 268 72.0
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 2.7e-99 365.9 265 71.3
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 3.5e-99 365.5 243 78.6
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 4.6e-99 365.2 270 68.5
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 1.7e-98 363.2 278 68.7
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 3.9e-98 362.1 272 69.9
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 5.0e-98 361.7 275 69.1
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 6.6e-98 361.3 273 68.9
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 4.3e-97 358.6 275 68.7
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 2.8e-96 355.9 241 77.6
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 3.6e-96 355.5 263 68.1
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 2.6e-94 349.4 270 66.3
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 1.3e-93 347.1 234 73.9
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 6.4e-93 344.7 268 65.3
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 3.2e-92 342.4 293 61.8
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 3.2e-92 342.4 270 64.1
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 1.3e-90 337.0 271 64.2
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 1.5e-89 333.6 225 76.9
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 5.6e-89 331.6 267 63.7
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 3.4e-86 322.4 267 61.0
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 4.4e-86 322.0 267 61.0
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 7.5e-86 321.2 258 62.8
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 2.2e-85 319.7 266 60.9
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 3.2e-84 315.8 266 60.2
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.6e-83 313.5 235 66.8
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 6.0e-83 311.6 240 67.9
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 6.6e-82 308.1 266 62.8
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.1e-81 307.4 240 65.8
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 1.5e-81 307.0 390 45.9
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.1e-79 300.8 269 59.9
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 5.2e-79 298.5 224 67.4
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 1.3e-74 283.9 235 64.3
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 5.8e-70 268.5 268 54.9
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 3.3e-65 252.7 265 52.5
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 4.2e-60 235.7 149 79.2
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 6.2e-56 221.9 196 63.8
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.2e-53 213.4 138 73.9
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 1.9e-52 210.3 220 54.5
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 1.8e-47 193.7 183 61.7
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 1.3e-45 187.6 217 49.8
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 2.9e-45 186.4 150 60.7
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.3e-42 177.6 121 76.0
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 1.5e-41 174.1 133 62.4
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 2.6e-38 163.3 138 63.0
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.8e-34 150.6 150 58.7
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 7.4e-33 145.2 209 45.0
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 1.8e-31 140.6 116 63.8
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.8e-26 124.0 119 60.5
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.0e-21 108.2 80 68.8
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.4e-20 104.4 80 68.8
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 2.7e-19 100.1 253 31.2
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 1.1e-12 78.2 108 42.6
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 1.5e-09 67.8 48 64.6


User provided reference genes

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