Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 6.7e-298 1026.5 510 100.0
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 1.4e-223 779.6 502 77.7
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 3.4e-217 758.4 509 76.4
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 1.4e-210 736.5 513 72.9
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 1.1e-207 726.9 512 72.1
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 1.0e-205 720.3 513 72.3
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 7.4e-204 714.1 512 71.5
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 5.9e-201 704.5 504 70.8
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 2.9e-200 702.2 499 72.1
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 2.6e-196 689.1 466 73.6
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 4.5e-193 678.3 504 68.7
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 1.9e-191 672.9 495 68.7
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 1.9e-191 672.9 503 70.8
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 2.1e-190 669.5 495 68.7
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 5.2e-181 638.3 509 62.9
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 6.7e-181 637.9 573 59.9
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 7.0e-178 627.9 497 63.8
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 3.2e-175 619.0 490 64.9
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 2.7e-174 615.9 477 63.3
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 3.2e-167 592.4 463 65.0
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 1.8e-165 586.6 481 62.4
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 7.5e-164 581.3 488 61.7
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 4.9e-163 578.6 502 61.8
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 1.6e-161 573.5 485 60.6
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 1.7e-160 570.1 489 62.2
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 2.0e-153 546.6 473 58.8
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 7.0e-146 521.5 483 58.6
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 6.0e-145 518.5 381 68.0
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 3.3e-143 512.7 393 66.9
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 1.3e-139 500.7 520 52.5
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 7.6e-132 474.9 520 51.0
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 3.6e-126 456.1 491 49.9
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 1.1e-125 454.5 473 50.1
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 2.4e-125 453.4 474 50.6
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 9.0e-125 451.4 474 50.2
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 1.5e-124 450.7 403 60.8
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 8.4e-115 418.3 340 63.8
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 1.0e-112 411.4 349 61.9
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 5.6e-111 405.6 444 47.1
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 1.6e-102 377.5 299 66.9
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 5.9e-76 289.3 514 37.4
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 3.9e-72 276.6 669 32.7
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 2.2e-67 260.8 193 67.9
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 2.4e-53 214.2 158 67.7
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 3.4e-47 193.7 224 42.0
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 3.4e-39 167.2 127 73.2
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 1.0e-27 129.0 92 67.4
Haze_19939 Corylus avellana HOM05D008447 ORTHO05D010638 2.1e-25 121.3 77 77.9
CSS0021541 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 7.8e-20 102.8 68 69.1
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 1.0e-19 102.4 100 49.0
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 5.8e-15 86.7 60 68.3
MBI08_g35877_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 1.2e-12 79.0 63 55.6
CBR_g669 Chara braunii HOM05D000019 ORTHO05D000048 3.9e-11 73.9 111 43.2
CBR_g671 Chara braunii HOM05D008447 ORTHO05D010638 3.1e-08 64.3 61 49.2
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 5.8e-07 60.1 279 24.7
SEGI_06266 Sequoiadendron giganteum HOM05D008447 ORTHO05D384438 1.3e-06 58.9 73 46.6
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 8.4e-06 56.2 298 24.2


User provided reference genes

Program Settings