Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10004784m.g Citrus clementina HOM05D007897 ORTHO05D010061 4.6e-206 721.5 511 100.0
Manes.05G198900 Manihot esculenta HOM05D007897 ORTHO05D010061 1.9e-111 407.1 487 70.0
Thecc.04G191100 Theobroma cacao HOM05D007897 ORTHO05D010061 4.2e-106 389.4 509 66.4
COL.COLO4_35959 Corchorus olitorius HOM05D007897 ORTHO05D010061 2.5e-103 380.2 505 60.0
TWI23G0094 Tripterygium wilfordii HOM05D007897 ORTHO05D010061 1.3e-102 377.9 444 70.0
Dinv32167 Davidia involucrata HOM05D007897 ORTHO05D010061 2.4e-101 373.6 452 70.8
Gorai.006G225200 Gossypium raimondii HOM05D007897 ORTHO05D010061 2.0e-100 370.5 428 67.1
Cpa.g.sc157.16 Carica papaya HOM05D007897 ORTHO05D010061 5.9e-100 369.0 478 67.8
MD04G1021700 Malus domestica HOM05D007897 ORTHO05D010061 1.7e-99 367.5 520 66.5
Sabra14G0112700 Salix brachista HOM05D007897 ORTHO05D010061 2.9e-99 366.7 494 66.4
QL06p027281 Quercus lobata HOM05D007897 ORTHO05D010061 3.8e-99 366.3 462 70.6
CSS0029276 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 1.1e-98 364.8 444 69.8
Gohir.D09G201400 Gossypium hirsutum HOM05D007897 ORTHO05D010061 1.9e-98 364.0 428 66.6
TAR633G2792 Trochodendron aralioides HOM05D007897 ORTHO05D010061 7.9e-97 358.6 442 71.3
Glyma.18G003400 Glycine max HOM05D007897 ORTHO05D010061 5.7e-95 352.4 501 67.7
TAR633G2399 Trochodendron aralioides HOM05D007897 ORTHO05D010061 7.4e-95 352.1 429 72.3
Cfa008662 Carpinus fangiana HOM05D007897 ORTHO05D010061 8.2e-94 348.6 512 64.5
Haze_11681 Corylus avellana HOM05D007897 ORTHO05D010061 1.1e-93 348.2 505 65.5
CANSAT78G0179 Cannabis sativa HOM05D007897 ORTHO05D010061 2.4e-93 347.1 457 71.8
FvH4_4g12861 Fragaria vesca HOM05D007897 ORTHO05D010061 5.3e-93 345.9 443 72.0
RcHm_v2.0_Chr4g0412521 Rosa chinensis HOM05D007897 ORTHO05D010061 6.9e-93 345.5 492 67.7
Phvul.001G265200 Phaseolus vulgaris HOM05D007897 ORTHO05D010061 2.0e-92 344.0 495 64.0
Duzib212G0894 Durio zibethinus HOM05D007897 ORTHO05D010061 2.6e-92 343.6 480 58.3
Nn8g41262 Nelumbo nucifera HOM05D007897 ORTHO05D010061 7.7e-92 342.0 447 67.8
Glyma.11G253700 Glycine max HOM05D007897 ORTHO05D010061 1.4e-90 337.8 488 66.6
THA.LOC104808674 Tarenaya hassleriana HOM05D007897 ORTHO05D010061 1.9e-90 337.4 467 66.0
FAN07G0261 Fragaria x ananassa HOM05D005839 ORTHO05D005686 5.5e-90 335.9 443 71.1
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 5.5e-90 335.9 500 62.6
arahy.Tifrunner.gnm1.ann1.T7EAWL Arachis hypogaea HOM05D007897 ORTHO05D010061 1.2e-89 334.7 444 69.8
arahy.Tifrunner.gnm1.ann1.TEUF1S Arachis hypogaea HOM05D007897 ORTHO05D010061 2.1e-89 334.0 444 69.6
Lalb_Chr03g0036571 Lupinus albus HOM05D007897 ORTHO05D010061 1.7e-86 324.3 476 56.1
CARHR220230 Cardamine hirsuta HOM05D007897 ORTHO05D010061 2.2e-86 323.9 470 63.4
Sed0009503 Sechium edule HOM05D007897 ORTHO05D010061 8.2e-86 322.0 447 66.2
Eucgr.L00640 Eucalyptus grandis HOM05D007897 ORTHO05D010061 2.4e-85 320.5 439 54.9
Thhalv10027442m.g Eutrema salsugineum HOM05D007897 ORTHO05D010061 1.4e-82 311.2 457 65.6
PSO017G4232 Papaver somniferum HOM05D007897 ORTHO05D010061 9.4e-82 308.5 496 52.4
Atru.chr3.1764 Acer truncatum HOM05D007897 ORTHO05D010061 1.2e-81 308.1 180 77.8
PSO063G5193 Papaver somniferum HOM05D007897 ORTHO05D010061 3.6e-81 306.6 500 51.6
AT4G14190 Arabidopsis thaliana HOM05D007897 ORTHO05D010061 8.0e-81 305.4 450 66.4
AL7G42190 Arabidopsis lyrata HOM05D007897 ORTHO05D010061 2.0e-79 300.8 450 62.0
Aa31LG9G3200 Aethionema arabicum HOM05D007897 ORTHO05D010061 4.8e-78 296.2 456 66.7
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 2.0e-76 290.8 445 52.4
Carub.0007s2820 Capsella rubella HOM05D007897 ORTHO05D010061 7.7e-76 288.9 445 60.9
MBI07_g06195_MAGBIO Magnolia biondii HOM05D007897 ORTHO05D010061 1.0e-75 288.5 447 66.7
ATR0807G097 Amborella trichopoda HOM05D007897 ORTHO05D010061 5.0e-75 286.2 466 61.2
Cc03_g09150 Coffea canephora HOM05D007897 ORTHO05D010061 6.5e-75 285.8 413 68.0
Potri.014G149500 Populus trichocarpa HOM05D007897 ORTHO05D010061 2.5e-74 283.9 371 72.5
Sp6g16180 Schrenkiella parvula HOM05D007897 ORTHO05D010061 4.2e-74 283.1 514 57.2
CSS0018651 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 1.2e-73 281.6 378 72.0
BcaB08g35766 Brassica carinata HOM05D007897 ORTHO05D010061 6.1e-73 279.3 460 58.9
CiPaw.02G062400 Carya illinoinensis HOM05D007897 ORTHO05D010061 6.7e-72 275.8 373 74.8
A10p11440 Brassica napus HOM05D007897 ORTHO05D010061 1.1e-69 268.5 484 58.9
Gohir.A09G207900 Gossypium hirsutum HOM05D007897 ORTHO05D010061 1.8e-69 267.7 180 69.4
BraA10t43238Z Brassica rapa HOM05D007897 ORTHO05D010061 9.1e-69 265.4 484 58.3
C09p44340 Brassica napus HOM05D007897 ORTHO05D010061 5.9e-68 262.7 484 57.0
BolC9t57304H Brassica oleracea HOM05D007897 ORTHO05D010061 3.6e-65 253.4 484 57.2
ECA248G1461 Erigeron canadensis HOM05D007897 ORTHO05D010061 5.7e-63 246.1 444 54.7
FAN17G1799 Fragaria x ananassa HOM05D005839 ORTHO05D005686 7.5e-63 245.7 378 67.2
HanXRQChr01g0022031 Helianthus annuus HOM05D007897 ORTHO05D010061 8.3e-62 242.3 443 56.2
FAN22G1341 Fragaria x ananassa HOM05D007897 ORTHO05D010061 4.1e-61 240.0 177 62.7
HanXRQChr17g0535531 Helianthus annuus HOM05D007897 ORTHO05D010061 1.6e-60 238.0 446 55.6
BcaC04g20377 Brassica carinata HOM05D007897 ORTHO05D010061 1.9e-58 231.1 484 50.8
Lsat_1_v5_gn_1_70121 Lactuca sativa HOM05D007897 ORTHO05D010061 5.2e-56 223.0 427 53.4
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 1.7e-54 218.0 364 68.7
Manes.05G199032 Manihot esculenta HOM05D007897 ORTHO05D010061 1.8e-53 214.5 344 72.4
HPP92_007232 Vanilla planifolia HOM05D007897 ORTHO05D010061 1.9e-50 204.5 420 57.4
Oeu050723.3 Olea europaea HOM05D007897 ORTHO05D009229 8.0e-49 199.1 153 60.1
Prupe.1G171300 Prunus persica HOM05D007897 ORTHO05D010061 3.5e-44 183.7 383 71.0
arahy.Tifrunner.gnm1.ann1.EZRM4Y Arachis hypogaea HOM05D007897 ORTHO05D010061 9.8e-39 165.6 333 70.6
Thhalv10027431m.g Eutrema salsugineum HOM05D007897 ORTHO05D010061 1.2e-23 115.5 94 60.6
HanXRQChr09g0243521 Helianthus annuus HOM05D007897 ORTHO05D010061 2.4e-21 107.8 127 44.9
Gohir.D07G125650 Gossypium hirsutum HOM05D007897 ORTHO05D010061 3.6e-17 94.0 88 51.1
Gorai.001G135500 Gossypium raimondii HOM05D007897 ORTHO05D010061 3.6e-17 94.0 89 50.6
Gohir.D01G146401 Gossypium hirsutum HOM05D007897 ORTHO05D010061 4.0e-16 90.5 87 51.7
Gohir.D13G096925 Gossypium hirsutum HOM05D007897 ORTHO05D010061 1.5e-15 88.6 93 50.5
Gorai.002G182100 Gossypium raimondii HOM05D007897 ORTHO05D010061 2.0e-15 88.2 84 51.2
FAN22G1963 Fragaria x ananassa HOM05D007897 ORTHO05D010061 2.4e-13 81.3 65 60.0
Gohir.D02G105900 Gossypium hirsutum HOM05D007897 ORTHO05D010061 1.6e-12 78.6 52 61.5
Oeu011819.1 Olea europaea HOM05D007036 ORTHO05D008885 2.1e-12 78.2 180 34.4
Mapoly0002s0203 Marchantia polymorpha HOM05D007036 ORTHO05D008885 3.0e-11 74.3 160 34.4
Lsat_1_v5_gn_6_31220 Lactuca sativa HOM05D007036 ORTHO05D008885 1.1e-10 72.4 164 32.9
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 1.9e-10 71.6 186 29.0
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 2.5e-10 71.2 131 34.4
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 7.3e-10 69.7 186 29.0
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 2.1e-09 68.2 182 29.7
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 2.1e-09 68.2 182 29.7
Sc16g0002180 Simmondsia chinensis HOM05D007036 ORTHO05D008885 2.1e-09 68.2 158 31.6
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 2.8e-09 67.8 180 29.4
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 6.2e-09 66.6 161 30.4
Pp3c4_3090 Physcomitrium patens HOM05D007036 ORTHO05D008885 1.4e-08 65.5 147 33.3
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 2.4e-08 64.7 180 28.3
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 2.4e-08 64.7 161 29.2
MSTRG.5959 Avicennia marina HOM05D007036 ORTHO05D008885 3.1e-08 64.3 157 33.1
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 6.9e-08 63.2 157 30.6
Hund24443 Selenicereus undatus HOM05D007897 ORTHO05D010061 1.5e-07 62.0 65 43.1
A02p10540 Brassica napus HOM05D007897 ORTHO05D010061 2.2e-06 58.2 49 59.2
Ca_04679_v3 Cicer arietinum L. HOM05D007036 ORTHO05D008885 2.2e-06 58.2 185 25.9
Pp3c3_31860 Physcomitrium patens HOM05D007036 ORTHO05D008885 2.2e-06 58.2 100 33.0


User provided reference genes

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