Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10004633m.g Citrus clementina HOM05D011814 ORTHO05D010151 1.1e-232 810.1 575 100.0
Atru.chr4.3190 Acer truncatum HOM05D011814 ORTHO05D010151 5.0e-23 113.6 294 40.1
Potri.005G001700 Populus trichocarpa HOM05D010591 ORTHO05D010151 2.4e-09 68.2 255 32.5
Prupe.1G208400 Prunus persica HOM05D033970 ORTHO05D010151 2.4e-09 68.2 272 35.7
Sabra13G0001000 Salix brachista HOM05D010591 ORTHO05D010151 2.4e-09 68.2 315 27.9
Dinv30954 Davidia involucrata HOM05D010591 ORTHO05D010151 4.1e-09 67.4 244 33.6
RcHm_v2.0_Chr4g0428021 Rosa chinensis HOM05D011814 ORTHO05D010151 9.1e-09 66.2 284 32.4
Actinidia11694 Actinidia chinensis HOM05D023883 ORTHO05D010151 2.0e-08 65.1 297 32.0
Cfa004395 Carpinus fangiana HOM05D010591 ORTHO05D010151 2.0e-08 65.1 307 30.3
TAR633G2217 Trochodendron aralioides HOM05D010591 ORTHO05D010151 3.5e-08 64.3 261 34.5
Potri.013G001150 Populus trichocarpa HOM05D010591 ORTHO05D010151 4.5e-08 63.9 257 27.6
QL03p011177 Quercus lobata HOM05D010591 ORTHO05D010151 7.7e-08 63.2 97 47.4
Actinidia17734 Actinidia chinensis HOM05D023883 ORTHO05D010151 1.3e-07 62.4 292 31.8
Lj5g0017234 Lotus japonicus HOM05D012338 ORTHO05D010151 1.3e-07 62.4 52 67.3
Eucgr.H04142 Eucalyptus grandis HOM05D011814 ORTHO05D010151 1.7e-07 62.0 185 35.1
TAR365G0948 Trochodendron aralioides HOM05D010591 ORTHO05D010151 2.3e-07 61.6 248 32.7
Ca_10209_v3 Cicer arietinum L. HOM05D012338 ORTHO05D010151 2.9e-07 61.2 154 38.3
RcHm_v2.0_Chr3g0458711 Rosa chinensis HOM05D016522 ORTHO05D010151 2.9e-07 61.2 253 31.6
FAN23G0450 Fragaria x ananassa HOM05D011814 ORTHO05D010151 5.0e-07 60.5 265 35.8
Phvul.007G206100 Phaseolus vulgaris HOM05D012338 ORTHO05D010151 5.0e-07 60.5 268 31.3
MD13G1136900 Malus domestica HOM05D033970 ORTHO05D010151 8.6e-07 59.7 249 30.5
CiPaw.01G001100 Carya illinoinensis HOM05D010591 ORTHO05D010151 1.5e-06 58.9 69 53.6
FAN02G4605 Fragaria x ananassa HOM05D016522 ORTHO05D010151 1.5e-06 58.9 62 59.7
FAN09G2016 Fragaria x ananassa HOM05D016522 ORTHO05D010151 1.5e-06 58.9 62 59.7
FAN12G3175 Fragaria x ananassa HOM05D011814 ORTHO05D010151 1.9e-06 58.5 134 41.8
FAN12G1733 Fragaria x ananassa HOM05D011814 ORTHO05D010151 2.5e-06 58.2 265 35.5
FAN05G3620 Fragaria x ananassa HOM05D016522 ORTHO05D010151 3.2e-06 57.8 67 55.2
Sabra05G0013900 Salix brachista HOM05D010591 ORTHO05D010151 5.5e-06 57.0 254 30.3
FvH4_4g21781 Fragaria vesca HOM05D011814 ORTHO05D010151 7.2e-06 56.6 134 41.0


User provided reference genes

Program Settings