Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 0.0e+00 1481.8 754 100.0
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 1.3e-180 637.5 773 50.8
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 1.7e-167 594.0 791 44.8
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 4.5e-165 585.9 784 46.6
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 9.7e-160 568.2 738 45.3
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 1.4e-158 564.3 767 44.5
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 1.8e-158 563.9 738 46.5
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 2.5e-155 553.5 769 44.3
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 7.2e-155 552.0 740 45.4
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 2.1e-154 550.4 748 44.8
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 1.4e-153 547.7 756 44.6
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 1.5e-147 527.7 749 42.9
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 7.5e-144 515.4 787 43.3
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 7.5e-144 515.4 789 43.1
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 1.3e-143 514.6 700 44.3
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 5.9e-141 505.8 750 42.7
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 2.9e-140 503.4 728 44.5
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 3.2e-139 500.0 795 42.0
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 6.1e-138 495.7 776 42.0
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 4.0e-137 493.0 763 42.5
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 1.5e-136 491.1 746 41.8
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 2.6e-136 490.3 715 43.9
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 3.4e-136 490.0 763 42.2
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 9.8e-136 488.4 756 42.2
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 1.4e-134 484.6 763 41.9
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.4e-134 483.8 743 42.7
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 9.1e-134 481.9 711 43.6
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.0e-132 478.4 753 42.0
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 2.9e-132 476.9 742 40.8
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 1.3e-127 461.5 729 41.2
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 1.1e-123 448.4 801 38.0
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 5.6e-123 446.0 715 40.3
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 3.7e-119 433.3 647 42.7
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 4.1e-118 429.9 547 47.7
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 2.3e-113 414.1 475 50.3
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 1.5e-112 411.4 795 37.5
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 6.4e-111 406.0 775 36.8
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 5.8e-104 382.9 754 37.8
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 5.8e-104 382.9 672 38.4
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 3.7e-103 380.2 786 36.5
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 3.2e-102 377.1 735 35.4
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 7.1e-102 375.9 667 39.1
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 2.7e-101 374.0 651 37.9
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 1.1e-99 368.6 683 36.7
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 7.3e-99 365.9 780 36.7
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 1.2e-98 365.2 741 36.4
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 2.4e-97 360.9 770 36.1
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 3.1e-97 360.5 782 36.2
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 1.2e-96 358.6 681 36.9
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 2.6e-96 357.5 780 35.4
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 9.9e-96 355.5 689 35.3
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 9.9e-96 355.5 791 34.4
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 1.7e-95 354.8 477 46.8
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 1.7e-95 354.8 791 34.3
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 2.2e-95 354.4 723 35.5
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 4.9e-95 353.2 752 35.6
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 2.1e-93 347.8 675 37.9
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 6.0e-93 346.3 816 33.2
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 1.3e-92 345.1 768 35.2
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 5.1e-92 343.2 687 35.8
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 1.6e-90 338.2 748 33.8
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 2.8e-90 337.4 654 37.0
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 1.8e-89 334.7 754 35.3
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 2.4e-89 334.3 754 35.1
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 6.9e-89 332.8 597 38.2
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 6.9e-89 332.8 782 34.5
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 9.0e-89 332.4 646 38.5
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 2.6e-88 330.9 789 34.3
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 7.6e-88 329.3 799 34.0
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 1.7e-87 328.2 775 32.0
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 3.8e-87 327.0 761 34.7
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 8.4e-87 325.9 784 33.4
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 5.4e-86 323.2 763 34.9
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 3.5e-85 320.5 738 33.5
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 2.5e-83 314.3 748 34.9
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 5.8e-80 303.1 360 51.1
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 7.6e-80 302.8 665 33.7
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 2.2e-79 301.2 761 31.4
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 6.0e-77 293.1 776 30.5
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 8.7e-76 289.3 673 34.3
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 2.5e-75 287.7 736 32.7
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 1.6e-74 285.0 603 36.2
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 4.8e-74 283.5 704 31.8
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 3.8e-71 273.9 751 32.0
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 1.9e-70 271.6 697 32.6
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 2.7e-69 267.7 763 31.7
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 1.1e-65 255.8 786 29.0
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 8.4e-63 246.1 507 33.9
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 1.6e-61 241.9 508 33.9
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 2.7e-61 241.1 508 33.7
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 6.1e-61 240.0 582 33.5
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 7.9e-61 239.6 519 34.5
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 9.7e-59 232.6 748 30.3
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 6.3e-58 229.9 733 31.2
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 1.4e-57 228.8 688 30.8
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 4.8e-50 203.8 706 29.6
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.7e-47 195.3 583 31.0
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 1.9e-46 191.8 751 26.0
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 4.2e-38 164.1 150 61.3
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 7.0e-33 146.7 274 39.1
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 3.5e-32 144.4 391 30.2
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 1.5e-27 129.0 729 25.8
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 7.5e-27 126.7 288 34.4
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 3.1e-25 121.3 688 24.6
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 3.2e-22 111.3 128 46.1
Os02g0461200 Oryza sativa ssp. japonica HOM05D006728 ORTHO05D007911 1.2e-21 109.4 571 24.0
Cfa008144 Carpinus fangiana HOM05D006728 ORTHO05D007911 1.2e-16 92.8 96 49.0
Zm00001eb295040 Zea mays HOM05D006728 ORTHO05D007911 1.3e-15 89.4 553 23.9
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 4.7e-13 80.9 149 36.2
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 3.0e-12 78.2 136 35.3
Prupe.8G015600 Prunus persica HOM05D025481 ORTHO05D007911 1.5e-11 75.9 309 27.8
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 5.7e-11 73.9 152 34.2
SHI29297 Sapria himalayana HOM05D006728 ORTHO05D007911 1.1e-09 69.7 69 52.2
SEGI_13134 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 5.6e-06 57.4 326 26.1


User provided reference genes

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