Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10004096m.g Citrus clementina HOM05D000311 ORTHO05D000183 3.5e-33 144.4 76 100.0
Ciclev10002613m.g Citrus clementina HOM05D000311 ORTHO05D000183 1.3e-24 115.9 74 83.8
Ciclev10003271m.g Citrus clementina HOM05D000311 ORTHO05D000183 7.8e-17 90.1 66 77.3
Sabra18G0101100 Salix brachista HOM05D000311 ORTHO05D000183 8.4e-11 70.1 65 60.0
Potri.018G120827 Populus trichocarpa HOM05D000311 ORTHO05D000183 7.1e-10 67.0 67 56.7
Potri.006G061000 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.2e-09 66.2 66 56.1
TWI34G0418 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 1.2e-09 66.2 68 54.4
TWI34G1007 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 1.6e-09 65.9 72 51.4
Potri.018G118062 Populus trichocarpa HOM05D000311 ORTHO05D000183 2.1e-09 65.5 66 56.1
Manes.14G121933 Manihot esculenta HOM05D000311 ORTHO05D000183 3.5e-09 64.7 66 50.0
Potri.018G118035 Populus trichocarpa HOM05D000311 ORTHO05D000183 3.5e-09 64.7 66 53.0
Potri.018G120700 Populus trichocarpa HOM05D000311 ORTHO05D000183 4.6e-09 64.3 66 54.5
Ciclev10003682m.g Citrus clementina HOM05D000311 ORTHO05D000183 6.0e-09 63.9 64 59.4
Manes.06G042600 Manihot esculenta HOM05D000311 ORTHO05D000183 6.0e-09 63.9 66 51.5
TWI34G1250 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 6.0e-09 63.9 72 50.0
TWI34G1807 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 6.0e-09 63.9 72 50.0
Dinv35862 Davidia involucrata HOM05D008203 ORTHO05D010058 7.8e-09 63.5 65 52.3
Sabra18G0099200 Salix brachista HOM05D000311 ORTHO05D000183 7.8e-09 63.5 65 55.4
TWI34G0850 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 7.8e-09 63.5 72 50.0
Potri.018G120800 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.0e-08 63.2 65 55.4
Sabra18G0100700 Salix brachista HOM05D000311 ORTHO05D000183 1.0e-08 63.2 65 58.5
TWI32G0203 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 1.0e-08 63.2 61 59.0
TWI32G1152 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 1.3e-08 62.8 66 53.0
Ciclev10006923m.g Citrus clementina HOM05D000311 ORTHO05D000183 1.7e-08 62.4 73 49.3
Potri.018G145512 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.7e-08 62.4 69 55.1
Gohir.D08G053700 Gossypium hirsutum HOM05D000311 ORTHO05D000183 2.3e-08 62.0 70 51.4
TWI34G0630 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 3.0e-08 61.6 72 50.0
Actinidia23545 Actinidia chinensis HOM05D000311 ORTHO05D000183 3.9e-08 61.2 66 53.0
Actinidia13955 Actinidia chinensis HOM05D000311 ORTHO05D000183 5.1e-08 60.8 67 52.2
Potri.001G063300 Populus trichocarpa HOM05D000311 ORTHO05D000183 5.1e-08 60.8 69 55.1
Manes.14G120156 Manihot esculenta HOM05D000311 ORTHO05D000183 6.6e-08 60.5 60 55.0
Potri.001G065327 Populus trichocarpa HOM05D000311 ORTHO05D000183 6.6e-08 60.5 69 53.6
Potri.018G144700 Populus trichocarpa HOM05D000311 ORTHO05D000183 6.6e-08 60.5 69 53.6
Potri.018G144800 Populus trichocarpa HOM05D000311 ORTHO05D000183 6.6e-08 60.5 69 53.6
QL04p004667 Quercus lobata HOM05D000311 ORTHO05D000183 6.6e-08 60.5 74 51.4
QL93p2015_0040 Quercus lobata HOM05D000311 ORTHO05D000183 6.6e-08 60.5 74 51.4
Thecc.10G149900 Theobroma cacao HOM05D000311 ORTHO05D000183 6.6e-08 60.5 71 46.5
Oeu015859.1 Olea europaea HOM05D000311 ORTHO05D000183 8.7e-08 60.1 75 45.3
Potri.018G124400 Populus trichocarpa HOM05D000311 ORTHO05D000183 8.7e-08 60.1 68 52.9
TWI32G0156 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 8.7e-08 60.1 74 44.6
Actinidia21924 Actinidia chinensis HOM05D000311 ORTHO05D000183 1.1e-07 59.7 65 52.3
Manes.06G040100 Manihot esculenta HOM05D000311 ORTHO05D000183 1.1e-07 59.7 72 47.2
Potri.001G065300 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.1e-07 59.7 68 54.4
Potri.018G145516 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.1e-07 59.7 68 54.4
Actinidia26343 Actinidia chinensis HOM05D000311 ORTHO05D000183 1.5e-07 59.3 66 48.5
Atru.chr12.2416 Acer truncatum HOM05D000311 ORTHO05D000183 1.9e-07 58.9 69 50.7
Potri.001G063909 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.9e-07 58.9 69 50.7
TWI34G2029 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 1.9e-07 58.9 65 52.3
Gohir.D10G125100 Gossypium hirsutum HOM05D000311 ORTHO05D000183 2.5e-07 58.5 66 43.9
TWI34G1219 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 2.5e-07 58.5 73 47.9
Duzib150G0385 Durio zibethinus HOM05D000311 ORTHO05D000183 3.3e-07 58.2 74 44.6
Gorai.010G228700 Gossypium raimondii HOM05D000311 ORTHO05D000183 4.3e-07 57.8 66 45.5
TWI14G0299 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 4.3e-07 57.8 74 45.9
CSS0030458 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 5.6e-07 57.4 61 50.8
QL04p004735 Quercus lobata HOM05D000311 ORTHO05D000183 5.6e-07 57.4 75 49.3
Dinv41536 Davidia involucrata HOM05D000311 ORTHO05D000183 9.6e-07 56.6 66 50.0
Duzib212G0464 Durio zibethinus HOM05D000311 ORTHO05D000183 9.6e-07 56.6 70 47.1
Hma1.2p1_0343F.1_g130765 Hydrangea macrophylla HOM05D000311 ORTHO05D000183 9.6e-07 56.6 66 47.0
Potri.001G065318 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.6e-06 55.8 65 53.8
Duzib150G0424 Durio zibethinus HOM05D000311 ORTHO05D000183 2.1e-06 55.5 74 40.5
TWI32G1252 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 2.1e-06 55.5 67 49.3
Rhsim01G0024100 Rhododendron simsii HOM05D000311 ORTHO05D000183 2.8e-06 55.1 55 58.2
CAN.G525.21 Capsicum annuum HOM05D000311 ORTHO05D000183 3.6e-06 54.7 65 41.5
Hma1.2p1_0949F.1_g240710 Hydrangea macrophylla HOM05D000311 ORTHO05D000183 3.6e-06 54.7 66 45.5
Manes.14G121884 Manihot esculenta HOM05D000311 ORTHO05D000183 3.6e-06 54.7 65 47.7
Sabra06G0043900 Salix brachista HOM05D000311 ORTHO05D000183 3.6e-06 54.7 63 47.6
Sabra18G0098600 Salix brachista HOM05D000311 ORTHO05D000183 3.6e-06 54.7 65 50.8
GSVIVG01035937001 Vitis vinifera HOM05D000311 ORTHO05D000183 3.6e-06 54.7 66 48.5
Phvul.008G108500 Phaseolus vulgaris HOM05D000311 ORTHO05D000183 4.7e-06 54.3 63 49.2
Actinidia23543 Actinidia chinensis HOM05D000311 ORTHO05D000183 6.2e-06 53.9 66 47.0
Gorai.009G010500 Gossypium raimondii HOM05D000311 ORTHO05D000183 6.2e-06 53.9 71 40.8
Potri.006G061300 Populus trichocarpa HOM05D000311 ORTHO05D000183 6.2e-06 53.9 64 45.3
Potri.018G144300 Populus trichocarpa HOM05D000311 ORTHO05D000183 6.2e-06 53.9 66 53.0
Dinv42933 Davidia involucrata HOM05D000311 ORTHO05D000183 8.1e-06 53.5 67 41.8
Dinv43167 Davidia involucrata HOM05D000311 ORTHO05D000183 8.1e-06 53.5 67 41.8
Manes.14G136856 Manihot esculenta HOM05D000311 ORTHO05D000183 8.1e-06 53.5 66 48.5
TWI34G0789 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 8.1e-06 53.5 74 40.5


User provided reference genes

Program Settings