Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10003577m.g Citrus clementina HOM05D000107 ORTHO05D000062 4.1e-71 271.2 127 100.0
Atru.chr1.1625 Acer truncatum HOM05D000107 ORTHO05D000062 3.7e-27 125.2 133 51.1
Atru.chr4.799 Acer truncatum HOM05D000107 ORTHO05D000062 3.7e-27 125.2 133 51.1
Atru.chr2.1893 Acer truncatum HOM05D000107 ORTHO05D000062 1.8e-26 122.9 133 49.6
Atru.chr2.1683 Acer truncatum HOM05D000107 ORTHO05D000062 2.4e-26 122.5 133 50.4
Atru.chr11.780 Acer truncatum HOM05D000107 ORTHO05D000062 1.5e-25 119.8 133 48.9
Atru.chr1.497 Acer truncatum HOM05D000107 ORTHO05D000062 4.6e-22 108.2 133 42.9
Atru.chr5.1751 Acer truncatum HOM05D000107 ORTHO05D000062 4.6e-22 108.2 133 42.9
Atru.chr3.2737 Acer truncatum HOM05D000107 ORTHO05D000062 4.2e-15 85.1 134 33.6
QL09p027832 Quercus lobata HOM05D000107 ORTHO05D000062 1.2e-14 83.6 151 35.1
Atru.chr10.32 Acer truncatum HOM05D000107 ORTHO05D000062 1.6e-14 83.2 133 32.3
Prupe.2G062700 Prunus persica HOM05D000107 ORTHO05D003213 4.6e-14 81.6 84 50.0
Atru.chr11.622 Acer truncatum HOM05D000107 ORTHO05D000062 6.1e-14 81.3 119 34.5
QL05p061366 Quercus lobata HOM05D000107 ORTHO05D000062 2.5e-12 75.9 152 36.2
QL04p020321 Quercus lobata HOM05D000315 ORTHO05D000062 4.3e-12 75.1 147 34.7
Atru.chr2.2656 Acer truncatum HOM05D000107 ORTHO05D000062 4.8e-11 71.6 120 32.5
Prupe.7G022900 Prunus persica HOM05D000107 ORTHO05D000062 3.1e-10 68.9 123 34.1
Lj1g0007648 Lotus japonicus HOM05D000107 ORTHO05D003213 8.5e-08 60.8 142 31.0
Sopen10g014350 Solanum pennellii HOM05D000107 ORTHO05D000062 7.2e-07 57.8 132 30.3
RcHm_v2.0_Chr5g0051181 Rosa chinensis HOM05D000107 ORTHO05D003213 1.6e-06 56.6 136 35.3
Sopen04g011400 Solanum pennellii HOM05D000107 ORTHO05D000062 2.1e-06 56.2 132 29.5
TWI34G0305 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.1e-06 56.2 149 29.5
Sopen09g019560 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-06 55.8 131 31.3
Rhsim02G0220700 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.6e-06 55.5 142 31.7
Rhsim06G0085100 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.6e-06 55.5 142 31.7
Hund01184 Selenicereus undatus HOM05D000107 ORTHO05D006908 4.7e-06 55.1 144 31.2
Rhsim08G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.1e-06 54.7 142 31.0


User provided reference genes

Program Settings