Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10003479m.g Citrus clementina HOM05D007421 ORTHO05D009203 9.5e-137 490.3 278 100.0
Atru.chr6.906 Acer truncatum HOM05D007421 ORTHO05D009203 2.0e-25 120.6 330 35.5
COL.COLO4_20870 Corchorus olitorius HOM05D007321 ORTHO05D009244 3.2e-23 113.2 271 36.9
CSS0048527 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 4.1e-23 112.8 263 35.4
CSS0030012 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 7.0e-23 112.1 263 35.4
Thecc.02G143500 Theobroma cacao HOM05D007421 ORTHO05D009203 1.6e-22 110.9 315 34.3
Gohir.A03G171600 Gossypium hirsutum HOM05D007421 ORTHO05D009203 7.8e-22 108.6 291 32.3
CiPaw.06G151100 Carya illinoinensis HOM05D007421 ORTHO05D009203 1.0e-21 108.2 276 37.0
Gorai.005G217800 Gossypium raimondii HOM05D007421 ORTHO05D009203 2.3e-21 107.1 293 32.1
EL10Ac8g19356 Beta vulgaris HOM05D007421 ORTHO05D009203 6.6e-21 105.5 264 34.1
Gorai.013G063400 Gossypium raimondii HOM05D007421 ORTHO05D009203 7.3e-20 102.1 296 32.1
Cfa005578 Carpinus fangiana HOM05D007421 ORTHO05D009203 1.6e-19 100.9 271 33.2
Gohir.D13G056100 Gossypium hirsutum HOM05D007421 ORTHO05D009203 4.7e-19 99.4 179 37.4
QL11p019404 Quercus lobata HOM05D007421 ORTHO05D009203 4.7e-19 99.4 287 33.8
Gohir.A13G065600 Gossypium hirsutum HOM05D007421 ORTHO05D009203 6.1e-19 99.0 295 32.9
TWI59G0537 Tripterygium wilfordii HOM05D007421 ORTHO05D009203 4.0e-18 96.3 327 33.0
Dinv24220 Davidia involucrata HOM05D007421 ORTHO05D009203 5.2e-18 95.9 275 32.7
Actinidia00249 Actinidia chinensis HOM05D007421 ORTHO05D009203 6.8e-18 95.5 283 32.9
Actinidia38971 Actinidia chinensis HOM05D003963 ORTHO05D004558 6.8e-18 95.5 250 33.6
Potri.005G176900 Populus trichocarpa HOM05D007421 ORTHO05D009203 6.8e-18 95.5 315 31.7
Cc02_g21850 Coffea canephora HOM05D007421 ORTHO05D009203 1.2e-17 94.7 299 32.8
Cpa.g.sc0.12 Carica papaya HOM05D007421 ORTHO05D009203 1.5e-17 94.4 193 36.3
Sabra05G0133500 Salix brachista HOM05D007421 ORTHO05D009203 1.5e-17 94.4 318 30.8
Sc08g0004770 Simmondsia chinensis HOM05D007421 ORTHO05D009203 2.0e-17 94.0 287 34.1
Nn5g28883 Nelumbo nucifera HOM05D007421 ORTHO05D009203 2.6e-17 93.6 274 32.8
TAR628G0675 Trochodendron aralioides HOM05D007421 ORTHO05D009203 2.6e-17 93.6 231 35.1
Manes.11G148500 Manihot esculenta HOM05D007421 ORTHO05D009203 9.8e-17 91.7 307 34.2
Lj9C318G13 Lonicera japonica HOM05D007421 ORTHO05D009203 1.3e-16 91.3 168 39.3
Ca_18335_v3 Cicer arietinum L. HOM05D007421 ORTHO05D009203 4.9e-16 89.4 259 37.1
CsaV3_7G012710 Cucumis sativus L. HOM05D007421 ORTHO05D009203 1.1e-15 88.2 261 30.3
Gohir.D02G194950 Gossypium hirsutum HOM05D007421 ORTHO05D009203 1.9e-15 87.4 282 30.5
Oeu000232.1 Olea europaea HOM05D007421 ORTHO05D009203 5.4e-15 85.9 174 35.1
DCAR_029217 Daucus carota HOM05D007421 ORTHO05D009203 1.2e-14 84.7 254 30.3
Prupe.1G559900 Prunus persica HOM05D007421 ORTHO05D009203 1.2e-14 84.7 283 36.7
CAN.G1034.36 Capsicum annuum HOM05D007421 ORTHO05D009203 1.3e-13 81.3 214 32.2
Psat7g097480 Pisum sativum HOM05D007421 ORTHO05D009203 1.3e-13 81.3 278 38.5
RcHm_v2.0_Chr7g0225501 Rosa chinensis HOM05D007421 ORTHO05D009203 1.3e-13 81.3 253 32.8
Rhsim11G0134600 Rhododendron simsii HOM05D007421 ORTHO05D009203 1.7e-13 80.9 336 32.4
Peaxi162Scf00003g03742 Petunia axillaris HOM05D007421 ORTHO05D009203 3.0e-13 80.1 274 30.3
Lj4g0022412 Lotus japonicus HOM05D007421 ORTHO05D009203 5.0e-13 79.3 257 35.0
vmacro01809 Vaccinium macrocarpon HOM05D007421 ORTHO05D009203 2.5e-12 77.0 287 29.3
ClCG09G021300 Citrullus lanatus HOM05D007421 ORTHO05D009203 5.6e-12 75.9 257 28.0
Sed0000945 Sechium edule HOM05D007421 ORTHO05D009203 7.3e-12 75.5 253 34.0
Medtr4g094292 Medicago truncatula HOM05D007421 ORTHO05D009203 9.5e-12 75.1 292 33.6
Nitab4.5_0011639g0020 Nicotiana tabacum HOM05D007421 ORTHO05D009203 6.2e-11 72.4 303 29.4
Solyc10g047040.3 Solanum lycopersicum HOM05D007421 ORTHO05D009203 8.0e-11 72.0 289 28.4
TPR.G10446 Trifolium pratense HOM05D007421 ORTHO05D009203 1.4e-10 71.2 243 34.6
Sopen10g016990 Solanum pennellii HOM05D007421 ORTHO05D009203 1.8e-10 70.9 281 29.2
Haze_09992 Corylus avellana HOM05D003963 ORTHO05D004558 3.1e-10 70.1 218 32.6
Potri.002G084750 Populus trichocarpa HOM05D007421 ORTHO05D009203 5.2e-10 69.3 278 29.1
CANSAT11G0077 Cannabis sativa HOM05D007421 ORTHO05D009203 6.8e-10 68.9 255 29.8
Nitab4.5_0000078g0170 Nicotiana tabacum HOM05D007421 ORTHO05D009203 1.2e-09 68.2 293 28.7
MD08G1222100 Malus domestica HOM05D007421 ORTHO05D009203 2.0e-09 67.4 206 33.0
MBI07_g32548_MAGBIO Magnolia biondii HOM05D007421 ORTHO05D009203 3.4e-09 66.6 117 38.5
HPP92_013365 Vanilla planifolia HOM05D007421 ORTHO05D009203 3.4e-09 66.6 164 32.9
Nitab4.5_0004176g0040 Nicotiana tabacum HOM05D007421 ORTHO05D009203 5.8e-09 65.9 301 26.6
Aqoxy5G02013 Aquilegia oxysepala HOM05D007421 ORTHO05D009203 7.5e-09 65.5 257 29.6
GSVIVG01022264001 Vitis vinifera HOM05D007421 ORTHO05D009203 7.5e-09 65.5 161 30.4
RcHm_v2.0_Chr5g0049711 Rosa chinensis HOM05D007421 ORTHO05D009203 1.3e-08 64.7 168 35.1
DCAR_001801 Daucus carota HOM05D007421 ORTHO05D009203 4.9e-08 62.8 106 50.9
CDE02G3538 Ceratophyllum demersum HOM05D007421 ORTHO05D009203 8.3e-08 62.0 105 32.4
RcHm_v2.0_Chr7g0236151 Rosa chinensis HOM05D007421 ORTHO05D009203 2.4e-07 60.5 156 35.3
Haze_10776 Corylus avellana HOM05D007421 ORTHO05D009203 5.4e-07 59.3 275 26.5
PGSC0003DMG400024171 Solanum tuberosum HOM05D007421 ORTHO05D009203 7.1e-07 58.9 282 28.4
ATR0753G155 Amborella trichopoda HOM05D007421 ORTHO05D009203 1.6e-06 57.8 44 56.8
FAN04G0435 Fragaria x ananassa HOM05D007421 ORTHO05D009203 1.6e-06 57.8 275 28.7
FAN18G4438 Fragaria x ananassa HOM05D007421 ORTHO05D009203 1.6e-06 57.8 271 27.3
Glyma.08G075000 Glycine max HOM05D007421 ORTHO05D009203 1.6e-06 57.8 257 26.1
CBR_g30215 Chara braunii HOM05D002710 ORTHO05D009203 2.1e-06 57.4 30 83.3
Phvul.002G206600 Phaseolus vulgaris HOM05D007421 ORTHO05D009203 2.1e-06 57.4 253 32.0
Glyma.05G120200 Glycine max HOM05D007421 ORTHO05D009203 2.7e-06 57.0 256 32.0
SMO172G0209 Selaginella moellendorffii HOM05D004073 ORTHO05D004785 2.7e-06 57.0 30 80.0
SMO198G0058 Selaginella moellendorffii HOM05D002710 ORTHO05D002905 2.7e-06 57.0 30 80.0
VMungo0251G1640 Vigna mungo HOM05D007421 ORTHO05D009203 2.7e-06 57.0 264 30.7
FvH4_5g30620 Fragaria vesca HOM05D007421 ORTHO05D009203 4.6e-06 56.2 271 28.0
Eucgr.I02692 Eucalyptus grandis HOM05D007421 ORTHO05D009203 6.0e-06 55.8 231 27.3
MCO11G228 Micromonas commoda HOM05D002710 ORTHO05D002905 6.0e-06 55.8 33 69.7
Medtr4g094298 Medicago truncatula HOM05D007421 ORTHO05D009203 7.8e-06 55.5 63 49.2


User provided reference genes

Program Settings